Csor.00g291380 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTCTTTTCAGCTGCAATTCTGCTGCTCCTGCTGCTTCTCGGCGGCACTGGTTTGTTTGTTGTTCTGTTCCTTGATCTTTTTGTTTTGTTGTGTTCTTTGAGGTCGGTTAGATGATTAAAATGGTTGATTTGGTCCAGGGATGGCGCCAATGGGTACAGAGGCAAGGACATGCGAGTCTCCGAGCCGCCACTTCAAGGGGTTGTGTTTCAGTAAGAACAACTGCGGCCATGTCTGCAAAACAGAGGGCTTCCATGGTGGGCATTGCAGAGGCTTCCGCCGCCGCTGCTTCTGCACAAAGCACTGCGTTTGA ATGAAGTTCTTTTCAGCTGCAATTCTGCTGCTCCTGCTGCTTCTCGGCGGCACTGGGATGGCGCCAATGGGTACAGAGGCAAGGACATGCGAGTCTCCGAGCCGCCACTTCAAGGGGTTGTGTTTCAGTAAGAACAACTGCGGCCATGTCTGCAAAACAGAGGGCTTCCATGGTGGGCATTGCAGAGGCTTCCGCCGCCGCTGCTTCTGCACAAAGCACTGCGTTTGA ATGAAGTTCTTTTCAGCTGCAATTCTGCTGCTCCTGCTGCTTCTCGGCGGCACTGGGATGGCGCCAATGGGTACAGAGGCAAGGACATGCGAGTCTCCGAGCCGCCACTTCAAGGGGTTGTGTTTCAGTAAGAACAACTGCGGCCATGTCTGCAAAACAGAGGGCTTCCATGGTGGGCATTGCAGAGGCTTCCGCCGCCGCTGCTTCTGCACAAAGCACTGCGTTTGA MKFFSAAILLLLLLLGGTGMAPMGTEARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV Homology
BLAST of Csor.00g291380 vs. ExPASy Swiss-Prot
Match: O65740 (Defensin J1-2 OS=Capsicum annuum OX=4072 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 2.6e-22 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0
BLAST of Csor.00g291380 vs. ExPASy Swiss-Prot
Match: Q9ZUL7 (Defensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PDF2.3 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 5.4e-20 Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Csor.00g291380 vs. ExPASy Swiss-Prot
Match: Q39182 (Defensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDF2.2 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 5.4e-20 Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of Csor.00g291380 vs. ExPASy Swiss-Prot
Match: P82659 (Defensin SD2 OS=Helianthus annuus OX=4232 GN=SD2 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.0e-18 Identity = 42/74 (56.76%), Postives = 50/74 (67.57%), Query Frame = 0
BLAST of Csor.00g291380 vs. ExPASy Swiss-Prot
Match: Q41914 (Defensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=PDF2.1 PE=2 SV=2) HSP 1 Score: 91.7 bits (226), Expect = 3.9e-18 Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of Csor.00g291380 vs. NCBI nr
Match: KAG6601912.1 (hypothetical protein SDJN03_07145, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 165 bits (417), Expect = 1.82e-51 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of Csor.00g291380 vs. NCBI nr
Match: XP_022922106.1 (defensin J1-2-like [Cucurbita moschata]) HSP 1 Score: 163 bits (413), Expect = 7.43e-51 Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of Csor.00g291380 vs. NCBI nr
Match: XP_022953671.1 (defensin J1-2-like [Cucurbita moschata] >KAG6601910.1 hypothetical protein SDJN03_07143, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162 bits (409), Expect = 3.03e-50 Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Csor.00g291380 vs. NCBI nr
Match: XP_022990903.1 (defensin J1-2-like [Cucurbita maxima]) HSP 1 Score: 158 bits (399), Expect = 9.90e-49 Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Csor.00g291380 vs. NCBI nr
Match: XP_023517597.1 (defensin J1-2-like [Cucurbita pepo subsp. pepo] >XP_023547787.1 defensin J1-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 152 bits (385), Expect = 1.36e-46 Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0
BLAST of Csor.00g291380 vs. ExPASy TrEMBL
Match: A0A6J1E380 (defensin J1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111430172 PE=4 SV=1) HSP 1 Score: 163 bits (413), Expect = 3.60e-51 Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of Csor.00g291380 vs. ExPASy TrEMBL
Match: A0A6J1GNQ3 (defensin J1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111456129 PE=4 SV=1) HSP 1 Score: 162 bits (409), Expect = 1.47e-50 Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Csor.00g291380 vs. ExPASy TrEMBL
Match: A0A6J1JUM8 (defensin J1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487653 PE=4 SV=1) HSP 1 Score: 158 bits (399), Expect = 4.79e-49 Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Csor.00g291380 vs. ExPASy TrEMBL
Match: A0A6J1JK66 (defensin J1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487652 PE=4 SV=1) HSP 1 Score: 150 bits (379), Expect = 5.42e-46 Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of Csor.00g291380 vs. ExPASy TrEMBL
Match: V5LEQ8 (Defensin-like protein 1 OS=Citrullus lanatus OX=3654 GN=PDF2.1 PE=2 SV=1) HSP 1 Score: 149 bits (377), Expect = 1.09e-45 Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0
BLAST of Csor.00g291380 vs. TAIR 10
Match: AT2G02100.1 (low-molecular-weight cysteine-rich 69 ) HSP 1 Score: 97.8 bits (242), Expect = 3.9e-21 Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of Csor.00g291380 vs. TAIR 10
Match: AT2G02130.1 (low-molecular-weight cysteine-rich 68 ) HSP 1 Score: 97.8 bits (242), Expect = 3.9e-21 Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Csor.00g291380 vs. TAIR 10
Match: AT2G02120.1 (Scorpion toxin-like knottin superfamily protein ) HSP 1 Score: 91.7 bits (226), Expect = 2.8e-19 Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of Csor.00g291380 vs. TAIR 10
Match: AT5G63660.1 (Scorpion toxin-like knottin superfamily protein ) HSP 1 Score: 81.3 bits (199), Expect = 3.7e-16 Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of Csor.00g291380 vs. TAIR 10
Match: AT1G61070.1 (low-molecular-weight cysteine-rich 66 ) HSP 1 Score: 77.0 bits (188), Expect = 7.1e-15 Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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