Csor.00g289500 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g289500
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr04: 17635587 .. 17637176 (+)
RNA-Seq ExpressionCsor.00g289500
SyntenyCsor.00g289500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAAGGCTGCTTCCAAAGAGGATACTGCAACTTCACAGACCCAGATTTCCAATATGCATCTTTCTGGGTTCATTTCCACCTCCTTCCATTGGCTTGCTTCTCGAGGAAAATAGCCACAGCTTTCGGGAGTATGGTTGGGAGTGTTGGGGGAAAAAACCATGAGAATTAGAATTACGATCCTCATTCTGAAAATGCCTTTGAGAAGAGTGGTGAAGTTGGAAGTATGGTCGTCCATGGGTTAAGAAACTTTGGTACCTATCATTTACAAAAGGCACCCGGATTTCTACTATGGATGATGGAAACTAAGGTATGTTCTACAAGACTGGTATCCTCATTCTGAAACTGCAGAGGAAGAGTTACAGTATGGAGACTGGCTAAGGGGGATGAGAAGGGAAATGGGTTTGGAAAGGGAAAGAACTGAAAATTTGAGAGGAAAGAGGAGCGGTAGGAAGAGGACTCCAAAGGCAGTGATGACCAGAACTGCAGGTCGTCGATGTCGGACGGCGAGGAGAGAGAGGTGATAGAGGAGGAATGGCGCCAAAAATGGAAAGGAGAAAATAGGGGGAAGAATCTGTAGGAGTGAGTTCAGGGGAAAGTAGGGAAGGCGATGAGAAAATGCAGGAGTCTACAAGGAAAGTTGTAAGAGTAAAAAAATGGAGATGTCAGGTTAGAAACCTGACTCTTTGCAATGATACCATATTGTCACTTTGAGTATAAACTCTCTGTTTTCCAAAAGGCTTCGTACCAATGAAGATGTATTCCTTACTTATAAACCTATGATCAAACTCTTAATTACTCGACGTGGGCCGAGCAGAAAAGTTGGAAGGAAGGCCGAGAGATGGGTTTGGACCAAATGGAAGCTGTAGGAACGAGAAGGGTTTCAATGTGCCATCAAGAAAGGAATGGAGAAGCCGAGGACCTGCAAAAGAATGGAATCCATAGGATGCAAGAAGATCACTGTCCACAGAACAAGAAAGATTGGAAGAAGAAATAAGCATGCAAGAATCTCAAGTGACCCTTTTGAAAAGAACAACTATCCTTTAGTTTTTTGTTTCCTAAGTCATGTCATCTAAATAGATTGATTGAAAGTTCTACTCATACCAATTTGCCTTTTCTCACATGATTGTCTTCTGCCAGTTCTGAGAAGGAAAGGACGTTCAGTTCATTTTGGCCATATATGTTTCTAATCCTAAAATTTTCTCCAACCAAACAGAATTCCAAATATATCTATTTCAACTAATTGATCAACTACCCTGACTGCATATCAAAAAGTAAAGGAAATTCAACCTCATCTATAAAGAATTGTTCTTCATTTATGACAAAAAAGTTATGAACTAACCTCGGATTCCCATGTATTGGCATAGACATTTCTGATGGAGCCAGTATGCAACCAGTGATATTCCAGCTTCCTGCTTTCTCTGTCTCTCTTCCAGCCATCTCCATTTTACTGTGTGAATATCCTCCAAATTTCCCTTGGCCAAAGATAATTGCCATTCTGGTTGTTTGCTCCATCAAAATATTCTCTGATTCAGCTATCTTCGAAAACACAGTCGACGATTTGAAGCGGTTTCATCAGTCATCCTAA

mRNA sequence

ATGGCAAAAGGCTGCTTCCAAAGAGGATACTGCAACTTCACAGACCCAGATTTCCAATATGCATCTTTCTGGGTTCATTTCCACCTCCTTCCATTGGCTTGCTTCTCGAGGAAAATAGCCACAGCTTTCGGGAAGGAAGAGTTACAGTATGGAGACTGGCTAAGGGGGATGAGAAGGGAAATGGGTTTGGAAAGGGAAAGAACTGAAAATTTGAGAGGAAAGAGGAGCGGTAGGAAGAGGACTCCAAAGGCAGTGATGACCAGAACTGCAGACATTTCTGATGGAGCCAGTATGCAACCAGTGATATTCCAGCTTCCTGCTTTCTCTGTCTCTCTTCCAGCCATCTCCATTTTACTGTGTGAATATCCTCCAAATTTCCCTTGGCCAAAGATAATTGCCATTCTGGTTGTTTGCTCCATCAAAATATTCTCTGATTCAGCTATCTTCGAAAACACAGTCGACGATTTGAAGCGGTTTCATCAGTCATCCTAA

Coding sequence (CDS)

ATGGCAAAAGGCTGCTTCCAAAGAGGATACTGCAACTTCACAGACCCAGATTTCCAATATGCATCTTTCTGGGTTCATTTCCACCTCCTTCCATTGGCTTGCTTCTCGAGGAAAATAGCCACAGCTTTCGGGAAGGAAGAGTTACAGTATGGAGACTGGCTAAGGGGGATGAGAAGGGAAATGGGTTTGGAAAGGGAAAGAACTGAAAATTTGAGAGGAAAGAGGAGCGGTAGGAAGAGGACTCCAAAGGCAGTGATGACCAGAACTGCAGACATTTCTGATGGAGCCAGTATGCAACCAGTGATATTCCAGCTTCCTGCTTTCTCTGTCTCTCTTCCAGCCATCTCCATTTTACTGTGTGAATATCCTCCAAATTTCCCTTGGCCAAAGATAATTGCCATTCTGGTTGTTTGCTCCATCAAAATATTCTCTGATTCAGCTATCTTCGAAAACACAGTCGACGATTTGAAGCGGTTTCATCAGTCATCCTAA

Protein sequence

MAKGCFQRGYCNFTDPDFQYASFWVHFHLLPLACFSRKIATAFGKEELQYGDWLRGMRREMGLERERTENLRGKRSGRKRTPKAVMTRTADISDGASMQPVIFQLPAFSVSLPAISILLCEYPPNFPWPKIIAILVVCSIKIFSDSAIFENTVDDLKRFHQSS
Homology
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BLAST of Csor.00g289500 vs. NCBI nr
Match: KAG6602098.1 (hypothetical protein SDJN03_07331, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332 bits (850), Expect = 1.07e-114
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MAKGCFQRGYCNFTDPDFQYASFWVHFHLLPLACFSRKIATAFGKEELQYGDWLRGMRRE 60
           MAKGCFQRGYCNFTDPDFQYASFWVHFHLLPLACFSRKIATAFGKEELQYGDWLRGMRRE
Sbjct: 1   MAKGCFQRGYCNFTDPDFQYASFWVHFHLLPLACFSRKIATAFGKEELQYGDWLRGMRRE 60

Query: 61  MGLERERTENLRGKRSGRKRTPKAVMTRTADISDGASMQPVIFQLPAFSVSLPAISILLC 120
           MGLERERTENLRGKRSGRKRTPKAVMTRTADISDGASMQPVIFQLPAFSVSLPAISILLC
Sbjct: 61  MGLERERTENLRGKRSGRKRTPKAVMTRTADISDGASMQPVIFQLPAFSVSLPAISILLC 120

Query: 121 EYPPNFPWPKIIAILVVCSIKIFSDSAIFENTVDDLKRFHQSS 163
           EYPPNFPWPKIIAILVVCSIKIFSDSAIFENTVDDLKRFHQSS
Sbjct: 121 EYPPNFPWPKIIAILVVCSIKIFSDSAIFENTVDDLKRFHQSS 163

The following BLAST results are available for this feature:
BLAST of Csor.00g289500 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g289500 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6602098.11.07e-114100.00hypothetical protein SDJN03_07331, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g289500 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g289500 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g289500.m01Csor.00g289500.m01mRNA