Csor.00g288560 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g288560
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionethylene-responsive transcription factor ERF110-like
LocationCsor_Chr04: 18173313 .. 18174119 (+)
RNA-Seq ExpressionCsor.00g288560
SyntenyCsor.00g288560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCTTGCTCAAGGTGGCGAATCGGCGAGGAATTGGAGGTGACTTGGGACCGTTTCCAAGTGGCGGCGGCGATGGCGACGGTGATAACGGCAAAAAGTTATTCTACAGTCAACAAAATGACGGCGATTATTATTCCGCTGTCGGAGAGGTGTCGGCGATGGTGTCGGTGTTAACCGATGTGGTGTCTGGGGTGGGGGCAGCCGACTCAAACTACAGCGGCGGGCAGGTTTTTTCGTCTTCATCGTCAACGTCGACTTCTTCGCCGCTGTCGAGTTTCTCGTCGGAACCGAGCTATGTGTCGGCGATGAGTTCTTGGGTTGGCCAGAAACGACTACGTGAAGGAGAAAATGCAGAAACAGAGCGTAATTTTGATTCTCTTTCGCGGGTTTTTAGTGGTTTTAATGGACAATCTTCCTCCGCCGTAATTACTGCAGGTTCGTAACAGAGCCGAGATAGAAATTTTAATTTAATTATTTTTGGATTTTAAAATTTTAAAAAATAAATGTGGAAGAGAAAATTAAGCAATAGAACAGTACAAGAAATTAATCTGGATTTTTTTTTTTTTTTTTTTTTTTGTGTAGTGAAAGAAGAAATTCCAATTCCGTACACCGGAATTTCAAATTCCGGCACCGCCGTTGCGGCGTCTCCGATGAGCGAGACGGCGGCGGCTACGGCTGTTAGCGATAGAAGAAGAAGATACAGAGGAGTACGGCAGCGGCCATGGGGGAAATGGGCGGCGGAGATTCGTGATCCGCATAAGGCGGCTAGAGTTTGGCTCGGGACGATCAACATTTCTTCATTCTGA

mRNA sequence

ATGTGCTTGCTCAAGGTGGCGAATCGGCGAGGAATTGGAGGTGACTTGGGACCGTTTCCAAGTGGCGGCGGCGATGGCGACGGTGATAACGGCAAAAAGTTATTCTACAGTCAACAAAATGACGGCGATTATTATTCCGCTGTCGGAGAGGTGTCGGCGATGGTGTCGGTGTTAACCGATGTGGTGTCTGGGGTGGGGGCAGCCGACTCAAACTACAGCGGCGGGCAGGTTTTTTCGTCTTCATCGTCAACGTCGACTTCTTCGCCGCTGTCGAGTTTCTCGTCGGAACCGAGCTATGTGTCGGCGATGAGTTCTTGGGTTGGCCAGAAACGACTACGTGAAGGAGAAAATGCAGAAACAGAGCGTAATTTTGATTCTCTTTCGCGGGTTTTTAGTGGTTTTAATGGACAATCTTCCTCCGCCGTAATTACTGCAGTGAAAGAAGAAATTCCAATTCCGTACACCGGAATTTCAAATTCCGGCACCGCCGTTGCGGCGTCTCCGATGAGCGAGACGGCGGCGGCTACGGCTGTTAGCGATAGAAGAAGAAGATACAGAGGAGTACGGCAGCGGCCATGGGGGAAATGGGCGGCGGAGATTCGTGATCCGCATAAGGCGGCTAGAGTTTGGCTCGGGACGATCAACATTTCTTCATTCTGA

Coding sequence (CDS)

ATGTGCTTGCTCAAGGTGGCGAATCGGCGAGGAATTGGAGGTGACTTGGGACCGTTTCCAAGTGGCGGCGGCGATGGCGACGGTGATAACGGCAAAAAGTTATTCTACAGTCAACAAAATGACGGCGATTATTATTCCGCTGTCGGAGAGGTGTCGGCGATGGTGTCGGTGTTAACCGATGTGGTGTCTGGGGTGGGGGCAGCCGACTCAAACTACAGCGGCGGGCAGGTTTTTTCGTCTTCATCGTCAACGTCGACTTCTTCGCCGCTGTCGAGTTTCTCGTCGGAACCGAGCTATGTGTCGGCGATGAGTTCTTGGGTTGGCCAGAAACGACTACGTGAAGGAGAAAATGCAGAAACAGAGCGTAATTTTGATTCTCTTTCGCGGGTTTTTAGTGGTTTTAATGGACAATCTTCCTCCGCCGTAATTACTGCAGTGAAAGAAGAAATTCCAATTCCGTACACCGGAATTTCAAATTCCGGCACCGCCGTTGCGGCGTCTCCGATGAGCGAGACGGCGGCGGCTACGGCTGTTAGCGATAGAAGAAGAAGATACAGAGGAGTACGGCAGCGGCCATGGGGGAAATGGGCGGCGGAGATTCGTGATCCGCATAAGGCGGCTAGAGTTTGGCTCGGGACGATCAACATTTCTTCATTCTGA

Protein sequence

MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTDVVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAETERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTINISSF
Homology
[Close]
BLAST of Csor.00g288560 vs. ExPASy Swiss-Prot
Match: Q9FGF8 (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN=ABR1 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-14
Identity = 68/173 (39.31%), Postives = 89/173 (51.45%), Query Frame = 0 

Query: 45  YSAVGEVSAMVSVLTDVVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMS 104
           +S   E+SA+VS LT VV+G         GG+     +S S+SS                
Sbjct: 67  FSREMEMSAIVSALTHVVAG-NVPQHQQGGGEGSGEGTSNSSSSS--------------- 126

Query: 105 SWVGQKRLREGE--NAETERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGT 164
              GQKR RE E   A+  +  ++L+ V   F+G SS++ +      +  P      + T
Sbjct: 127 ---GQKRRREVEEGGAKAVKAANTLT-VDQYFSGGSSTSKVREASSNMSGPGPTYEYTTT 186

Query: 165 AVAASPMSETAAATAVSDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 216
           A A+S  S  +        RRRYRGVRQRPWGKWAAEIRDP KAARVWLGT +
Sbjct: 187 ATASSETSSFSG----DQPRRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFD 215

[Close]
BLAST of Csor.00g288560 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-12
Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = 0 

Query: 100 VSAMSSWVGQKRLREGENAETERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISN 159
           VSA++  V  +   E E A +  +     R + G +              IP  +  + +
Sbjct: 5   VSALTQVVSARSQTEAEGAHSSSSSAGHKRGWLGID-----------SAPIPSSFARVDS 64

Query: 160 SGTAVAASPMSETAAATAVSDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 216
           S   +  S MS+ A      +++RRYRGVRQRPWGKWAAEIRDPH+AARVWLGT +
Sbjct: 65  SHNPIEES-MSK-AFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFD 107

[Close]
BLAST of Csor.00g288560 vs. ExPASy Swiss-Prot
Match: Q7G1L2 (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 5.5e-12
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 0 

Query: 127 LSRVFSGFNGQSSSAVIT----AVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSDRR 186
           L+ V SG    S+SA  T      +EE  +P   +      +  S +++   ++   +R 
Sbjct: 5   LTNVVSGETEPSASATWTMGHKREREEFSLPPQPL------ITGSAVTKECESSMSLERP 64

Query: 187 RRYRGVRQRPWGKWAAEIRDPHKAARVWLGT 214
           ++YRGVRQRPWGKWAAEIRDPHKA RVWLGT
Sbjct: 65  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGT 89

[Close]
BLAST of Csor.00g288560 vs. ExPASy Swiss-Prot
Match: P93007 (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-11
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 179 SDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 216
           + R+R YRGVRQRPWGKWAAEIRDP+KAARVWLGT +
Sbjct: 64  NSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFD 100

[Close]
BLAST of Csor.00g288560 vs. ExPASy Swiss-Prot
Match: Q9LYU3 (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGT 214
           RRR YRGVRQRPWGKWAAEIRDP KAARVWLGT
Sbjct: 35  RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 67

[Close]
BLAST of Csor.00g288560 vs. NCBI nr
Match: KAG6602190.1 (Ethylene-responsive transcription factor RAP2-6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 415 bits (1066), Expect = 8.90e-146
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60
           MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD
Sbjct: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60

Query: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120
           VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET
Sbjct: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120

Query: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD 180
           ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD
Sbjct: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD 180

Query: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTINISSF 219
           RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTINISSF
Sbjct: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTINISSF 219

[Close]
BLAST of Csor.00g288560 vs. NCBI nr
Match: KAG7032874.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404 bits (1039), Expect = 2.46e-139
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0 

Query: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60
           MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD
Sbjct: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60

Query: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120
           VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET
Sbjct: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120

Query: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD 180
           ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD
Sbjct: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD 180

Query: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 215
           RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGT +
Sbjct: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFD 215

[Close]
BLAST of Csor.00g288560 vs. NCBI nr
Match: XP_022963777.1 (ethylene-responsive transcription factor ERF110-like [Cucurbita moschata])

HSP 1 Score: 399 bits (1026), Expect = 2.42e-137
Identity = 211/215 (98.14%), Postives = 212/215 (98.60%), Query Frame = 0 

Query: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60
           MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD
Sbjct: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60

Query: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120
           VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLRE ENAET
Sbjct: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLRERENAET 120

Query: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD 180
           ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISN GTAVAASPMSETAAATAVSD
Sbjct: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNPGTAVAASPMSETAAATAVSD 180

Query: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 215
           RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGT +
Sbjct: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFD 215

[Close]
BLAST of Csor.00g288560 vs. NCBI nr
Match: XP_023535415.1 (ethylene-responsive transcription factor ERF110-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388 bits (997), Expect = 5.40e-133
Identity = 207/215 (96.28%), Postives = 209/215 (97.21%), Query Frame = 0 

Query: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60
           MCL KVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQ+NDGDYYSAVGEVSAMVSVLTD
Sbjct: 1   MCLFKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQENDGDYYSAVGEVSAMVSVLTD 60

Query: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120
           VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET
Sbjct: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120

Query: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD 180
           ERNFDSLSRVF   NGQSSSAVITAVKEEIPIPYTGISN GTAVAASPMSETAAATAVSD
Sbjct: 121 ERNFDSLSRVF---NGQSSSAVITAVKEEIPIPYTGISNPGTAVAASPMSETAAATAVSD 180

Query: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 215
           RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGT +
Sbjct: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFD 212

[Close]
BLAST of Csor.00g288560 vs. NCBI nr
Match: XP_022990388.1 (ethylene-responsive transcription factor ERF110-like [Cucurbita maxima])

HSP 1 Score: 370 bits (951), Expect = 5.66e-126
Identity = 197/215 (91.63%), Postives = 201/215 (93.49%), Query Frame = 0 

Query: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60
           MCLLKVANRRGIGGDLGPFPSGGG+GDG NG KLF SQ ND DYY AVGEVSAMVSVLTD
Sbjct: 1   MCLLKVANRRGIGGDLGPFPSGGGNGDGHNGNKLFSSQHNDRDYYCAVGEVSAMVSVLTD 60

Query: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120
           VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET
Sbjct: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120

Query: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD 180
           E NFDSLSRVFSGFNGQSSSAVI A+KEE+P PYTGISN GTAVAASPM E AAATA SD
Sbjct: 121 EPNFDSLSRVFSGFNGQSSSAVIPAMKEEVPSPYTGISNPGTAVAASPMIEIAAATAASD 180

Query: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 215
           RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGT +
Sbjct: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFD 215

[Close]
BLAST of Csor.00g288560 vs. ExPASy TrEMBL
Match: A0A6J1HG50 (ethylene-responsive transcription factor ERF110-like OS=Cucurbita moschata OX=3662 GN=LOC111463966 PE=4 SV=1)

HSP 1 Score: 399 bits (1026), Expect = 1.17e-137
Identity = 211/215 (98.14%), Postives = 212/215 (98.60%), Query Frame = 0 

Query: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60
           MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD
Sbjct: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60

Query: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120
           VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLRE ENAET
Sbjct: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLRERENAET 120

Query: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD 180
           ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISN GTAVAASPMSETAAATAVSD
Sbjct: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNPGTAVAASPMSETAAATAVSD 180

Query: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 215
           RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGT +
Sbjct: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFD 215

[Close]
BLAST of Csor.00g288560 vs. ExPASy TrEMBL
Match: A0A6J1JT50 (ethylene-responsive transcription factor ERF110-like OS=Cucurbita maxima OX=3661 GN=LOC111487261 PE=4 SV=1)

HSP 1 Score: 370 bits (951), Expect = 2.74e-126
Identity = 197/215 (91.63%), Postives = 201/215 (93.49%), Query Frame = 0 

Query: 1   MCLLKVANRRGIGGDLGPFPSGGGDGDGDNGKKLFYSQQNDGDYYSAVGEVSAMVSVLTD 60
           MCLLKVANRRGIGGDLGPFPSGGG+GDG NG KLF SQ ND DYY AVGEVSAMVSVLTD
Sbjct: 1   MCLLKVANRRGIGGDLGPFPSGGGNGDGHNGNKLFSSQHNDRDYYCAVGEVSAMVSVLTD 60

Query: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120
           VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET
Sbjct: 61  VVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQKRLREGENAET 120

Query: 121 ERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSD 180
           E NFDSLSRVFSGFNGQSSSAVI A+KEE+P PYTGISN GTAVAASPM E AAATA SD
Sbjct: 121 EPNFDSLSRVFSGFNGQSSSAVIPAMKEEVPSPYTGISNPGTAVAASPMIEIAAATAASD 180

Query: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 215
           RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGT +
Sbjct: 181 RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFD 215

[Close]
BLAST of Csor.00g288560 vs. ExPASy TrEMBL
Match: A0A0A0KBA4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G055940 PE=4 SV=1)

HSP 1 Score: 208 bits (530), Expect = 3.23e-62
Identity = 138/244 (56.56%), Postives = 160/244 (65.57%), Query Frame = 0 

Query: 1   MCLLKVANRRGIGGDLGPFPSGG-GDGDGDNG-------------KKLFYSQQNDGDYYS 60
           MC LKVANRRGIG DL  FPSGG GDGDGD G              +L Y Q++DGDYYS
Sbjct: 1   MCSLKVANRRGIGSDLAQFPSGGAGDGDGDTGGGGGGGSSSSDDPHRLLYGQRDDGDYYS 60

Query: 61  AVGEVSAMVSVLTDVVSGVGAADSNYSGGQVF-------SSSSSTSTSSPLSSFSSEPSY 120
           AVGEVS +VS LT+V+SG  A D  Y  GQ F       SSSSS+ST+S   S  SE SY
Sbjct: 61  AVGEVSTIVSTLTNVMSGQAAPDWGYGRGQGFPRGFVSSSSSSSSSTTSASGSSGSELSY 120

Query: 121 VSAMSS-WVGQKRLREGE-NAETERNFDSLSRVFS---GFNGQSSS--AVITAVKEEIPI 180
           V  MSS WVGQKR+RE E + +T+ +F S SR FS   GF+   S   + I  VKEE+P 
Sbjct: 121 VPGMSSYWVGQKRMREEEISVQTQHDFHSASRGFSFIRGFDHHFSQPQSSIPPVKEEVPP 180

Query: 181 P-YTGISNSGTAVAASPMSETAAATAVSDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWL 215
           P +T +SN     AAS M+   A   + +RRRRYRGVRQRPWGKWAAEIRDPHKAARVWL
Sbjct: 181 PPHTAVSNPAATFAASSMTSNDAVV-IGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWL 240

[Close]
BLAST of Csor.00g288560 vs. ExPASy TrEMBL
Match: A0A5A7UL07 (Ethylene-responsive transcription factor ERF113-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001210 PE=4 SV=1)

HSP 1 Score: 206 bits (524), Expect = 1.78e-61
Identity = 133/238 (55.88%), Postives = 157/238 (65.97%), Query Frame = 0 

Query: 1   MCLLKVANRRGIGGDLGPFPSGG-GDGDGDNG----------KKLFYSQQNDGDYYSAVG 60
           MC LKVANRRGIG DL  FPSGG GDGDGD G           +L Y Q++DGDY S VG
Sbjct: 1   MCSLKVANRRGIGSDLAQFPSGGAGDGDGDTGGGGSSSSDDPHRLLYGQRDDGDYTSGVG 60

Query: 61  EVSAMVSVLTDVVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMSSWVGQ 120
           E S +VS LT+V+SG  A D +Y GGQ F SSSS+++        SE  YV  MS WVGQ
Sbjct: 61  EFSTIVSTLTNVMSGQAAPDWSYGGGQGFVSSSSSAS-------GSERRYVPGMSYWVGQ 120

Query: 121 KRLREGE-NAETERNFDSLSRVFS--GFN--------GQSSSAVITAVKEEIPIP-YTGI 180
           KR+RE E + ET+ +FDS+SR FS  GF         GQSS+A    VKEE+P P +T +
Sbjct: 121 KRMREEEISVETQHDFDSVSRGFSFRGFEDHISHSQQGQSSNA---PVKEEVPPPPHTAV 180

Query: 181 SNSGTAVAASPMSETAAATAVSDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 215
           SN   A A S ++   A   + +RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGT +
Sbjct: 181 SNPAAAFAPSSLTSNDAVV-IGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFD 227

[Close]
BLAST of Csor.00g288560 vs. ExPASy TrEMBL
Match: A0A6J1JVK4 (ethylene-responsive transcription factor ABR1-like OS=Cucurbita maxima OX=3661 GN=LOC111489264 PE=4 SV=1)

HSP 1 Score: 202 bits (515), Expect = 2.82e-60
Identity = 130/237 (54.85%), Postives = 152/237 (64.14%), Query Frame = 0 

Query: 1   MCLLKVANRRGIGGDLGPFPSGG-GDGDGDNG----KKLFYSQQNDGDYYSAVGEVSAMV 60
           MC LKVAN RGIG DL  FPSGG GDGDGD+G     +LFYSQ +DGDYYSAVGEVS +V
Sbjct: 1   MCSLKVANPRGIGSDLAQFPSGGAGDGDGDSGGDDPHRLFYSQHDDGDYYSAVGEVSTIV 60

Query: 61  SVLTDVVSGVGAADSNYSGGQVF--------------SSSSSTSTSSPLSSFSS--EPSY 120
           S LT+V+SG GA + +Y G Q F              S+S+S STSSPLS++SS  E SY
Sbjct: 61  STLTNVMSGQGAGEWSYGGSQGFAAGFVSSSSSSSSASASASASTSSPLSAYSSGSERSY 120

Query: 121 VSAMSSWVGQKRLREGENAETERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTG-IS 180
            SAMS WVGQKR+RE E+ +                          VKEEI IP    ++
Sbjct: 121 ASAMSYWVGQKRMREEESVQ--------------------------VKEEISIPNPNTVA 180

Query: 181 NSGTAVAASPMSETAAATAVSDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 215
           ++  AV A P+S   A  A  +RRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGT +
Sbjct: 181 SNPAAVLAFPVSSNEAVAATGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFD 211

[Close]
BLAST of Csor.00g288560 vs. TAIR 10
Match: AT5G64750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 68/173 (39.31%), Postives = 89/173 (51.45%), Query Frame = 0 

Query: 45  YSAVGEVSAMVSVLTDVVSGVGAADSNYSGGQVFSSSSSTSTSSPLSSFSSEPSYVSAMS 104
           +S   E+SA+VS LT VV+G         GG+     +S S+SS                
Sbjct: 67  FSREMEMSAIVSALTHVVAG-NVPQHQQGGGEGSGEGTSNSSSSS--------------- 126

Query: 105 SWVGQKRLREGE--NAETERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISNSGT 164
              GQKR RE E   A+  +  ++L+ V   F+G SS++ +      +  P      + T
Sbjct: 127 ---GQKRRREVEEGGAKAVKAANTLT-VDQYFSGGSSTSKVREASSNMSGPGPTYEYTTT 186

Query: 165 AVAASPMSETAAATAVSDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 216
           A A+S  S  +        RRRYRGVRQRPWGKWAAEIRDP KAARVWLGT +
Sbjct: 187 ATASSETSSFSG----DQPRRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFD 215

[Close]
BLAST of Csor.00g288560 vs. TAIR 10
Match: AT5G50080.1 (ethylene response factor 110 )

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-13
Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = 0 

Query: 100 VSAMSSWVGQKRLREGENAETERNFDSLSRVFSGFNGQSSSAVITAVKEEIPIPYTGISN 159
           VSA++  V  +   E E A +  +     R + G +              IP  +  + +
Sbjct: 5   VSALTQVVSARSQTEAEGAHSSSSSAGHKRGWLGID-----------SAPIPSSFARVDS 64

Query: 160 SGTAVAASPMSETAAATAVSDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 216
           S   +  S MS+ A      +++RRYRGVRQRPWGKWAAEIRDPH+AARVWLGT +
Sbjct: 65  SHNPIEES-MSK-AFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFD 107

[Close]
BLAST of Csor.00g288560 vs. TAIR 10
Match: AT1G43160.1 (related to AP2 6 )

HSP 1 Score: 72.8 bits (177), Expect = 3.9e-13
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 0 

Query: 127 LSRVFSGFNGQSSSAVIT----AVKEEIPIPYTGISNSGTAVAASPMSETAAATAVSDRR 186
           L+ V SG    S+SA  T      +EE  +P   +      +  S +++   ++   +R 
Sbjct: 5   LTNVVSGETEPSASATWTMGHKREREEFSLPPQPL------ITGSAVTKECESSMSLERP 64

Query: 187 RRYRGVRQRPWGKWAAEIRDPHKAARVWLGT 214
           ++YRGVRQRPWGKWAAEIRDPHKA RVWLGT
Sbjct: 65  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGT 89

[Close]
BLAST of Csor.00g288560 vs. TAIR 10
Match: AT2G33710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 179 SDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 216
           + R+R YRGVRQRPWGKWAAEIRDP+KAARVWLGT +
Sbjct: 64  NSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFD 100

[Close]
BLAST of Csor.00g288560 vs. TAIR 10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 179 SDRRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTIN 216
           + R+R YRGVRQRPWGKWAAEIRDP+KAARVWLGT +
Sbjct: 64  NSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFD 100

The following BLAST results are available for this feature:
BLAST of Csor.00g288560 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FGF81.5e-1439.31Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q70II33.2e-1239.66Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ... [more]
Q7G1L25.5e-1245.05Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 ... [more]
P930071.6e-1181.08Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LYU32.1e-1193.94Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Csor.00g288560 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6602190.18.90e-146100.00Ethylene-responsive transcription factor RAP2-6, partial [Cucurbita argyrosperma... [more]
KAG7032874.12.46e-13999.07Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_022963777.12.42e-13798.14ethylene-responsive transcription factor ERF110-like [Cucurbita moschata][more]
XP_023535415.15.40e-13396.28ethylene-responsive transcription factor ERF110-like [Cucurbita pepo subsp. pepo... [more]
XP_022990388.15.66e-12691.63ethylene-responsive transcription factor ERF110-like [Cucurbita maxima][more]
BLAST of Csor.00g288560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HG501.17e-13798.14ethylene-responsive transcription factor ERF110-like OS=Cucurbita moschata OX=36... [more]
A0A6J1JT502.74e-12691.63ethylene-responsive transcription factor ERF110-like OS=Cucurbita maxima OX=3661... [more]
A0A0A0KBA43.23e-6256.56AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G055940 PE=... [more]
A0A5A7UL071.78e-6155.88Ethylene-responsive transcription factor ERF113-like protein OS=Cucumis melo var... [more]
A0A6J1JVK42.82e-6054.85ethylene-responsive transcription factor ABR1-like OS=Cucurbita maxima OX=3661 G... [more]
BLAST of Csor.00g288560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G64750.11.1e-1539.31Integrase-type DNA-binding superfamily protein [more]
AT5G50080.12.3e-1339.66ethylene response factor 110 [more]
AT1G43160.13.9e-1345.05related to AP2 6 [more]
AT2G33710.11.1e-1281.08Integrase-type DNA-binding superfamily protein [more]
AT2G33710.21.1e-1281.08Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 185..196
score: 76.67
coord: 207..219
score: 31.44
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 184..218
e-value: 2.5E-4
score: 23.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 184..213
e-value: 7.4E-6
score: 26.1
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 184..219
score: 14.934358
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 183..215
e-value: 2.9E-10
score: 42.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..97
NoneNo IPR availablePANTHERPTHR31190:SF262ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110coord: 48..213
IPR044808Ethylene-responsive transcription factorPANTHERPTHR31190DNA-BINDING DOMAINcoord: 48..213
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 184..213

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g288560.m01Csor.00g288560.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009873 ethylene-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity