Csor.00g287360 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAGATAAGGTTGATTGAAGCCATAATGGGAAGAATGGATAGGAAATCATCCATTGAAAGAGAGCCCAGGACTCTCAAAATGAACCAAATCCAATTTGCAAGAGTAAGTATGGAAGGCTTAATGATTGTGTGTGTGTGTGTGTGTGTTTTTGGTTTGAGTAAGGCTTTCAGATGAGCAATGGTTTTGTGATGAACTGCAGGAAGCAGCGCTGTACGTGATGAACACAACTAGCATGGAAGAAGCAATCAAGATCTTCACAGAGGTAATATCATACACAAATTCCGCTATCAATCATTAACAGATTCCGTATTGGTTGGAGTGGGTAACGAAACATTTTTTATAAGGGTATGAAAATCGCTCCATAATACACGCATTTTAAAATTGTGAGACGGATGACGATACGTAATGGGCCAAAACAGACATATTGCTCTATTAGCATTGAGCTTGGGCTATTACAAATGGTATCTGTGTCAGCGAGGGCTCTCTCTGGCCCATAAGAGGGTGAATTGGTAACGGTACGTAACGGGCCAAAGCGGACACATCTAGGTGGGCTTGGGCTATTACAAATGGTATCTGTGTCAGCGAGGACTCTCTCTGGCCCATAAAAAGGTGAATTGGTAACGGTACGTAACAGGCCAAAGCGGACACATCTAGTTGGGCTGGGGTTATTACAAATGGTATCTGTGTCAGCGAGGTGCTCTCCCTGGCCCCTAAGAGGGTGAATTGTGAGATCCCACATTGGTGGGGAGAGGAACAAAACATTCCTTATAAGGGTGTGAAAATCTCTCCCTAGGTTGGTAGCGGTACGTAACGGGCCAAAGCGGACACATCTAGGTGGGCTTGGGCTATTACAAATGGTTTCAAAGCCAGACAACGGACAGTGTGTCAATGAAGACGCTGACCCTCTAAGGAGGTGGATTGTGAGATCCCATATTCTTTGTAGAGGAAGAACAAAGCATTCCTTATAACAGTGTGGAAACCTCTCCCTAGTAGATGCCTTCTGAAACCCCGAGGCTGACAAAAGCGGACAATATCTACTAGCGGCGGGCTTGGACTATTACAAATGGTACCAGAGCCAGACACCGAGTGATGAGCCAACAAGGACGCTGCTCCCAAAGGGGTGGATTTCGAAATCTCATTCGTTGGGGACGGAAATGAAGCATTCCTTATAAGAGTATGGAAACCTCTCCCTAGTAGACACATTTTAAAACTTTGAGGTTGACAGCGATACATAAGGAGTCAAAGCGGACAATATCTACTAGCGGTGGGTTTGAGCTATTACAAATGGTATCAGAGTCACAGAGTCCATACCGTGTAGTGTGTCAGCGAGGATGCTGACCCTCAAAGTGGTGGATTGTGAGATTCCACATTGGTTGGAGAGGGGAACGGAACATTCTTACCTCTCTCTAATAAACACGTTTAAAACTATGAGGCTGACGACGTTACCTAACGGACCAAAACGAACCATATTTACTAGCGGTGAAATGAAGCTATTACCATTACTTTAATATAAAAAATGGAAAAGGGTTATATGATGGCGATGTAGTGGAAAATGCAGGGATTAGAAGCAGCGGAATGCAAAGCAATACGAGATGAAGATGAATCCATAATGGAGAATTGGTTCCATGAACAAGAAGCTGATGAGCTTCCACCTCTTTATCAGCTTAGAGACATTGTCACTGCCCCTTTTTAG ATGGATAAGATAAGGTTGATTGAAGCCATAATGGGAAGAATGGATAGGAAATCATCCATTGAAAGAGAGCCCAGGACTCTCAAAATGAACCAAATCCAATTTGCAAGAGAAGCAGCGCTGTACGTGATGAACACAACTAGCATGGAAGAAGCAATCAAGATCTTCACAGAGGGATTAGAAGCAGCGGAATGCAAAGCAATACGAGATGAAGATGAATCCATAATGGAGAATTGGTTCCATGAACAAGAAGCTGATGAGCTTCCACCTCTTTATCAGCTTAGAGACATTGTCACTGCCCCTTTTTAG ATGGATAAGATAAGGTTGATTGAAGCCATAATGGGAAGAATGGATAGGAAATCATCCATTGAAAGAGAGCCCAGGACTCTCAAAATGAACCAAATCCAATTTGCAAGAGAAGCAGCGCTGTACGTGATGAACACAACTAGCATGGAAGAAGCAATCAAGATCTTCACAGAGGGATTAGAAGCAGCGGAATGCAAAGCAATACGAGATGAAGATGAATCCATAATGGAGAATTGGTTCCATGAACAAGAAGCTGATGAGCTTCCACCTCTTTATCAGCTTAGAGACATTGTCACTGCCCCTTTTTAG MDKIRLIEAIMGRMDRKSSIEREPRTLKMNQIQFAREAALYVMNTTSMEEAIKIFTEGLEAAECKAIRDEDESIMENWFHEQEADELPPLYQLRDIVTAPF Homology
BLAST of Csor.00g287360 vs. NCBI nr
Match: KAG6571348.1 (hypothetical protein SDJN03_30263, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197 bits (500), Expect = 2.57e-63 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Csor.00g287360 vs. NCBI nr
Match: XP_023512402.1 (uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo] >KAG7011119.1 hypothetical protein SDJN02_27917, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 176 bits (445), Expect = 4.64e-55 Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of Csor.00g287360 vs. NCBI nr
Match: XP_008460897.1 (PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo]) HSP 1 Score: 138 bits (348), Expect = 2.97e-40 Identity = 70/92 (76.09%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of Csor.00g287360 vs. NCBI nr
Match: XP_011649401.1 (uncharacterized protein LOC105434623 [Cucumis sativus] >KGN62156.1 hypothetical protein Csa_006615 [Cucumis sativus]) HSP 1 Score: 133 bits (335), Expect = 2.84e-38 Identity = 66/92 (71.74%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Csor.00g287360 vs. NCBI nr
Match: XP_038902606.1 (uncharacterized protein LOC120089256 [Benincasa hispida]) HSP 1 Score: 130 bits (328), Expect = 3.12e-37 Identity = 67/91 (73.63%), Postives = 81/91 (89.01%), Query Frame = 0
BLAST of Csor.00g287360 vs. ExPASy TrEMBL
Match: A0A1S3CDH2 (uncharacterized protein LOC103499638 OS=Cucumis melo OX=3656 GN=LOC103499638 PE=4 SV=1) HSP 1 Score: 138 bits (348), Expect = 1.44e-40 Identity = 70/92 (76.09%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of Csor.00g287360 vs. ExPASy TrEMBL
Match: A0A0A0LQ89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302230 PE=4 SV=1) HSP 1 Score: 133 bits (335), Expect = 1.38e-38 Identity = 66/92 (71.74%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Csor.00g287360 vs. ExPASy TrEMBL
Match: A0A6J1G887 (uncharacterized protein LOC111451648 OS=Cucurbita moschata OX=3662 GN=LOC111451648 PE=4 SV=1) HSP 1 Score: 126 bits (317), Expect = 7.18e-36 Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of Csor.00g287360 vs. ExPASy TrEMBL
Match: A0A6J1DBC1 (uncharacterized protein LOC111018915 OS=Momordica charantia OX=3673 GN=LOC111018915 PE=4 SV=1) HSP 1 Score: 120 bits (302), Expect = 1.70e-33 Identity = 61/95 (64.21%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of Csor.00g287360 vs. ExPASy TrEMBL
Match: A0A6J1I9E9 (uncharacterized protein LOC111470407 OS=Cucurbita maxima OX=3661 GN=LOC111470407 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 9.37e-20 Identity = 44/47 (93.62%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of Csor.00g287360 vs. TAIR 10
Match: AT4G33467.2 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 4.1e-10 Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = 0
BLAST of Csor.00g287360 vs. TAIR 10
Match: AT4G33467.1 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 5.4e-10 Identity = 42/101 (41.58%), Postives = 62/101 (61.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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