Csor.00g286940 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCCTTGTCTTGATCGTCGTCTTCTTTATTGTTCAATCAGTAGTGGGTGACAGTGACACTGAGGATAGGATCAATAACTTGTGTCATCAAATGGAGGAATTCGGGTTTTGCAGTCAAACCTTCCATGAGAATCTAAATGGTCCGACAGACGATATAGGACTAACCCAAATAGCAATTTTCCAAGCTCAAGCCAATGCAAGCAAAACACTTCGGTATTGTTGTGAAAAATACATATCAAATTTAAAAAGTTACAAAGGGTTTAAGTTGATAGGTTAAGATGAATACTTGCATTCTTAATAGGTATATTCAAGAGCTTCTACCAACAATAACTGATCCTGCATTGAAGAACGGCCTTATAGTATGTGAAAATGCATACAAGACAGTGAATGAAGCACTTCAAGAAGGGATTGAATTATTCTTCAAAAAAGATTATAGAAGCATGTTAAATGTCGAGAAGATTGCACCCAGAGCACAAGCGAGTTGCAACATGATTTTTAGCACACCACCCGAAAAACAAGGTCTACTAGAGGAGAGGAACAGGGAGATAAGAATTCTGATTGCCATGGCTATAGTTTCGGGCTACATCATGACCAGTTCTAGCTCTCTCTAA ATGTTCCTTGTCTTGATCGTCGTCTTCTTTATTGTTCAATCAGTAGTGGGTGACAGTGACACTGAGGATAGGATCAATAACTTGTGTCATCAAATGGAGGAATTCGGGTTTTGCAGTCAAACCTTCCATGAGAATCTAAATGGTCCGACAGACGATATAGGACTAACCCAAATAGCAATTTTCCAAGCTCAAGCCAATGCAAGCAAAACACTTCGGTATATTCAAGAGCTTCTACCAACAATAACTGATCCTGCATTGAAGAACGGCCTTATAGTATGTGAAAATGCATACAAGACAGTGAATGAAGCACTTCAAGAAGGGATTGAATTATTCTTCAAAAAAGATTATAGAAGCATGTTAAATGTCGAGAAGATTGCACCCAGAGCACAAGCGAGTTGCAACATGATTTTTAGCACACCACCCGAAAAACAAGGTCTACTAGAGGAGAGGAACAGGGAGATAAGAATTCTGATTGCCATGGCTATAGTTTCGGGCTACATCATGACCAGTTCTAGCTCTCTCTAA ATGTTCCTTGTCTTGATCGTCGTCTTCTTTATTGTTCAATCAGTAGTGGGTGACAGTGACACTGAGGATAGGATCAATAACTTGTGTCATCAAATGGAGGAATTCGGGTTTTGCAGTCAAACCTTCCATGAGAATCTAAATGGTCCGACAGACGATATAGGACTAACCCAAATAGCAATTTTCCAAGCTCAAGCCAATGCAAGCAAAACACTTCGGTATATTCAAGAGCTTCTACCAACAATAACTGATCCTGCATTGAAGAACGGCCTTATAGTATGTGAAAATGCATACAAGACAGTGAATGAAGCACTTCAAGAAGGGATTGAATTATTCTTCAAAAAAGATTATAGAAGCATGTTAAATGTCGAGAAGATTGCACCCAGAGCACAAGCGAGTTGCAACATGATTTTTAGCACACCACCCGAAAAACAAGGTCTACTAGAGGAGAGGAACAGGGAGATAAGAATTCTGATTGCCATGGCTATAGTTTCGGGCTACATCATGACCAGTTCTAGCTCTCTCTAA MFLVLIVVFFIVQSVVGDSDTEDRINNLCHQMEEFGFCSQTFHENLNGPTDDIGLTQIAIFQAQANASKTLRYIQELLPTITDPALKNGLIVCENAYKTVNEALQEGIELFFKKDYRSMLNVEKIAPRAQASCNMIFSTPPEKQGLLEERNREIRILIAMAIVSGYIMTSSSSL Homology
BLAST of Csor.00g286940 vs. NCBI nr
Match: KAG6599000.1 (hypothetical protein SDJN03_08778, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 339 bits (869), Expect = 3.14e-117 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Csor.00g286940 vs. NCBI nr
Match: XP_022946902.1 (uncharacterized protein LOC111450843 [Cucurbita moschata]) HSP 1 Score: 335 bits (858), Expect = 2.19e-115 Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of Csor.00g286940 vs. NCBI nr
Match: XP_022972818.1 (uncharacterized protein LOC111471342 [Cucurbita maxima]) HSP 1 Score: 318 bits (816), Expect = 4.83e-109 Identity = 161/172 (93.60%), Postives = 167/172 (97.09%), Query Frame = 0
BLAST of Csor.00g286940 vs. NCBI nr
Match: KAG7029966.1 (hypothetical protein SDJN02_08310, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 315 bits (807), Expect = 1.24e-106 Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of Csor.00g286940 vs. NCBI nr
Match: XP_023546425.1 (uncharacterized protein LOC111805547 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 268 bits (684), Expect = 1.33e-88 Identity = 134/168 (79.76%), Postives = 150/168 (89.29%), Query Frame = 0
BLAST of Csor.00g286940 vs. ExPASy TrEMBL
Match: A0A6J1G4X2 (uncharacterized protein LOC111450843 OS=Cucurbita moschata OX=3662 GN=LOC111450843 PE=4 SV=1) HSP 1 Score: 335 bits (858), Expect = 1.06e-115 Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of Csor.00g286940 vs. ExPASy TrEMBL
Match: A0A6J1IB75 (uncharacterized protein LOC111471342 OS=Cucurbita maxima OX=3661 GN=LOC111471342 PE=4 SV=1) HSP 1 Score: 318 bits (816), Expect = 2.34e-109 Identity = 161/172 (93.60%), Postives = 167/172 (97.09%), Query Frame = 0
BLAST of Csor.00g286940 vs. ExPASy TrEMBL
Match: A0A6J1KFT2 (uncharacterized protein LOC111493503 OS=Cucurbita maxima OX=3661 GN=LOC111493503 PE=4 SV=1) HSP 1 Score: 256 bits (654), Expect = 4.68e-85 Identity = 127/154 (82.47%), Postives = 139/154 (90.26%), Query Frame = 0
BLAST of Csor.00g286940 vs. ExPASy TrEMBL
Match: A0A6J1G4V3 (uncharacterized protein LOC111450827 OS=Cucurbita moschata OX=3662 GN=LOC111450827 PE=4 SV=1) HSP 1 Score: 250 bits (638), Expect = 1.28e-82 Identity = 123/154 (79.87%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of Csor.00g286940 vs. ExPASy TrEMBL
Match: A0A6J1DRX6 (uncharacterized protein LOC111023283 OS=Momordica charantia OX=3673 GN=LOC111023283 PE=4 SV=1) HSP 1 Score: 214 bits (546), Expect = 3.06e-68 Identity = 104/163 (63.80%), Postives = 131/163 (80.37%), Query Frame = 0
BLAST of Csor.00g286940 vs. TAIR 10
Match: AT1G09360.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 90.1 bits (222), Expect = 1.9e-18 Identity = 58/174 (33.33%), Postives = 89/174 (51.15%), Query Frame = 0
BLAST of Csor.00g286940 vs. TAIR 10
Match: AT1G09370.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 9.0e-13 Identity = 48/173 (27.75%), Postives = 84/173 (48.55%), Query Frame = 0
BLAST of Csor.00g286940 vs. TAIR 10
Match: AT1G56620.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05 Identity = 33/153 (21.57%), Postives = 67/153 (43.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|