Csor.00g286880 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g286880
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	5'-3' exoribonuclease
Location	Csor_Chr05: 6120599 .. 6127798 (+)
RNA-Seq Expression	Csor.00g286880
Synteny	Csor.00g286880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTTCCAGCCTTCTATAAGTGGTTAGCGGAGAAGTATCCATTGGTAGTTGCGGATGTAATAGAGGAAGCACCCGTTGTAATAGATGGCATCGCCATTCCAGTTGATACAAGCAAACCCAATCCAAACAATCTTGAATTTGATAACCTCTACCTAGACATGAATGGCATTATTCATCCATGCTTCCACCCAGAAGATAGGGTAAACATTTGACACATATATTGAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCATCATATAGCTATGTCATTTGTGGTGTTTCATTTTAGATAACATTGTAAATTTGTGGCGGAGAGTGCCAAGCTTTAATTTAATAAATTTAAGCAACGTTGGTCAGGATCAATTTTTCTTTGATGAAAAGGGAGATAACATAGTCAGTCCACGTACAACCTGATGTAGAAATTCTTTCACTTGATGTCGAGTCAAGGGACCAAAGCCAATAAATTTGGGCTAGTAATCTCACATGCTAGAATAAGTAATTGTACTTTCAGTTTAGGAACATGCCTATTCTCCACGGAAGAAAAGCCTAATACATTTAAATTTCGTTGTCGTCTAATATATATTTTTTTTGATGTTGCTTGATCGTTCTATTTTACTGGTGCAGCCTTCTCCAACAACTTTTAGCGAGGTATTTCGTAGCATGTTTGATTATATTGATAGGCTTTTTGTCATGGTCCGGCCTAGAAAATTGCTATACATGGCTATTGGTGAGTTCCCAACTTTATTTATTTATGTTTTGTTGCTTCAAATTGGTTAGATGGAGGAGTGGTAATGTTTGTTTTTAATGTTTATTTCCTGTTGAAATGAATGTATAGATGGTGTTGCCCCTAGGGCAAAAATGAATCAACAGCGATCTCGACGGTTTAGAGCTGCAAAAGATGCAGTAGAAGCGGTATGTGCTTTTGTTTGATAGTCTTTTCCTGGGTTGAAGGGTGTAAACCACCTTCCTGACTATTACATGTCTAATAAGTTCCTTGACTACCACTTGTATTAGATGATATGGTTGTGACTTGTACTTGACAGTTTTAGATTTGATGGTATTGAGTCTTAAGTTTATAGAGAGTTCAAGTTGATTTTTCAAAATTAGTACATGTCAGACATTGCATTGACTGTGCCCCTCTCCTTTATCACCTCCAGTTGGAGTGTTTTGTTGAATTCATTTCAAGGAAGCTTTTTGTATCTTCCATTCATTTGAATGAACTTCTAGTTAGTAGAGTTGGGTGCTAAAATCCTGTTTTTATTTATTTATTTTATGAATAACTTACAAATATGTTCTGCGTATAAAAAAGTTGGTAGGATATTGCTTTTGGCTATTTCTTTTCCTGCCTTAGTATGATGTATAATTGAAGTGTTCAACTGCATCAATTTCACGTGAACGATTATGTACAGAGAAGATAATCTCCTGGTATGAGTATTTAATAAACTATGCTTTTTTTTTTTCTCTTAGGCCGCTGAAGAGGCACGATTAAGACAGGAGTTTGAGAGGGAGGGACGAAAGCTTCCTCCAAACGAAGAGTCACAAGTTTTTGATTCCAATGTGATCACTCCTGGAACTGACTTTATGTCTGTTCTTTCCGTTGCTTTGCAGTACTACATTCATCTTAGACTAAACAACGACCCAGGTTGGAAAGGTATTAAGGTAAACATGACATGACTATTACTTGTATTCTAAAACCGGTAGTTTCACTGAATAGTGAATCCAGTTTTGCCCGATTTTAAGTGCTTTTAAAATGTGTAGGTTATTCTTTCTGATGCCAATGTTCCGGGTGAAGGGGAGCACAAAATAATGTCCTATATTCGTCTTCAGAGAAATGTTCCTGGTTTTGATCCCAATACTCGTCACTGCCTGTATGGTTTGGTATATTTTTTTTCTCCATGCTTATTTTATGTAATTCACATACCTCTTGATTGTATGTGTTTTTTTTAAAATTAGAGTTTTCATGATTTCATCACCTGGTTGTTGAATACAGCGTATCACTTGATTTTACAATTTCAGGATGCAGATTTGATAATGTTAGCTTTGGCTACCCATGAAGTCCATTTTTCAATAATGCGTGAGGTTTGTATTTTTGCTTATACTTTGGCTACGCTGCTGCAGTTTTTGGAGAATTTGGTATCACTCCCTTCCTGAGGACATGACACATGTTCATTATTTAAAATATTCAATGTATGTGCATTATACTTCATGAGCCAATAACAACCATTGTTTCTTGGTAAACTTCAGATCATGTTCACTCCTGAACAGCAAAAAAAGTGCTTTCTAGCTGACCGTAAACGTAAAGCAAAGAGAAAGGCTAGCGAGTTTGATGCGAAAGGGGAAGGTGTAGTTAAAAAACCTTACCAGGTAGGATTTCCTCATATTTGTTCTTTGTTCTCTGGTGGAATAATGGGTCAAATTCTTTATGTCCTATATCTGTTATTTACTTCGTATGGTCCTTTTATTATGCAGTTTCTCCATATATGGATACTTAGAGAGTACTTGGAACGTGAGATGTGTATTCCTAATGCTCCCGTTGAAAGTGACATTGAACGCATTGTGGATGATTTTGTGTTCATGTGTTTCTTTGTTGGTAATGACTTTTTACCTCATATGCCCACATTAGAGATTCGGGAGGTAGAGTCCATACTTGAACTTACCATTTATAAGTTAATGAAGTTTTGTTTGACCTCCAAATGGAATTGTTCTATTCAAGATTTCGGGAATTCCATTTTTTTCTTTTCTAAATTTTGTTATTTTTGCATGTTTGATTTCAGTTAACTTGTCAGCTCTTTGTTAAGGGTAAAAGAATTTTTTTAGGGAAGTGAACGTTCAGCTTGTTAGCCTTTATGAAGAATGAAAAAGCAGATACATAGAGGAATATTGCTACTGAGGAAGAAATTTAAAAAAATATTGATAATCTCTTAACTTGGAACAAAAAAAGAATTATAAGTGTACACCATTAAACAAAAGTCGTGTTTATGGAAGTTACGTGTAGAGGTTGATTATTGTCAGCCTTTTAATCCAAGGTTCGATCAGCTATATGAGCAAAAAGTTGTATGTTTTGTCTTGGACGTCATATGTTGGTCGATGTGGTTCCGTCTTGGCAGATATATCCTAAGAGGTTTAGGTGACTTTTCTTCTTGCAATTATAAGTATTCGAAGAATTTGGATTGTTTTTAGGTGCAAGTTAGAATGGAGGTATTATTTTTTTGTTCTTTAATTCCAGGGTGCAATTGACTTGCTATTGGCTGTGTATAAGAAGAAAGTAAGGGAAGTTGGTGGGTATTTGACTAAAGGAAGCAAGGTAATTTTTTTTCCTTTTTGGTTTTTTGATTTTATGCTATAATTTACATTAACATCTGTGAGCTCAGGCATGAAATGCTTTACTGTGGGTCTTATGTCAGCCAAATTTGCGCATAGTGGAACAATTTATTCAAGCTGTTGGAAGTAATGAAGATAACATATTCCGAAGAAGAGCTAAACGGCATAAGGTTCTCTTCGTTCTTATGTATACATGTTTTATGCGTTATTTATCCCATCATCTTTCTCGTTTTGAGGTGAGAATTATAGAGATTTTTTTTTTTTTTTTTTTTTTTTTCCAGAGGTGAGGATTAAGAAACAAAATTTCATTTACGATGAAATTTACTAAAAGACTTTTAATTTCTAGTTAATTTGTAGATTACATCTCATATTGATTGTATTCCTATGTGATATCCTTTCTATTCTCTCACTGTTGGTCATCTTTTATAAATTCAGAAGCAGGCAGGCAGAATAAAGCTCGCTAAAGCTCTGACAAGTAGAGGAGATGATGCAGGGCCTTGGGTTCAACCATCCTTAGTTGCAGTAGCTCGTTTTCATAGATCTCGTCTAGCTTCAGCTCCTTATCCTTCGCCATATGGACAATCAAGAAAAGCCACGTCCAGATTCTCAGGACTGAAAAATAAGAATATGCAACGTCCTAACAAAGTTGCACGTCCATCGTCTGGGGATTCTATTGGTTCTGCCATCGTTGAAGCAGAAAACACTTCGGAAATAGATGTACGTTTCCTTGCTTAGGGCGTAGTTCATTGTTATTATGACTTCCATTAGCCATTTTTTAGGACTATTTCTATGGCTAACCTGTAATTGGTATGGGCCTTGCCGGCATGGGTTTTCATTTAGACCATTGAGAAGGTCTAGAATGCTAATTATATCTAAGTTTTGTTTATCTTCTAGATCCATGAGAACAGCAAGGAATTGAAGACAAAGCTTAAGGAGTTTCTGCGTGAGAAGTCTGATGTTTTCAACTCTAATGATTCAGAAGTAGACAAGGTTTGTATCTAGTAATGCTAATAGTCTAATCATAGTTGTATAGTACAATAATCAATGTGTTAAAAGTTCATCTCGTAAGCTGAATGAATGTTGGCGGTCAGATTAAATTGGGCATACCTGGGTGGAGAGAAAGGTATTATAATGAGAAGTTTTCTGGAAATACTCCTGAGGAACTCGATGACATACGGAATGATGTTGTAAGTTATTAAGCGAATTTCTAGTGATTTCTTTTTTTTTTATCTTCTGGAATTGTAGGCTAATTTTTGTTGTTTTTCTGGCAGGTTTTGAGGTACACAGAAGGCCTATGTTGGATTATGCGCTATTATTACGAAGGCGTTTGTTCTTGGCAATGGTGAGGTTTTTATTCTCGTTTCTTTGGCGCTTTTGCCATCTTTTATTTTTCGTGTTATTGCTTATTGTTGTCTAAGATAAATGGACGTCTTAAAATGAGTAGCAGAATCTAAATTGAAACCGGTTGTTATCTTCTCATCAGTTTTCCTCTTTCTAGATTCTGCTACAATTTTTTTTACCTGCCTATGTGTCTCTAGCACATCGTTAATATGCCCTGACCTCGTAATTAAAAAGGATAAAATAATAAAAATTGAGAAAATTTATTAAAAGAAGTCGTTCTAAATGACGTGACTATCATGGGTTTGGAGTGCATCTATCGGCCGTGGGTTTAGACTGCATATCTTTACGCGTCTGTGTAATCTCAATTACTTATCTCTGATGAAGTGAATGTATTTAGTTCTTATTCTCGTGATGTTCTTTTGTTGTTTACTAATGCCATTTTCTTCTTCAGGTTTTATCCATATCATTATGCACCATTTGCTTCTGATCTCAAAGGTCTTGATAAGCTGAATATATCATTCACTCTAGGCACTCCCTTCAAGCCATTCAATCAGCTACTGGGTGTCTTCCCTGCTGCTAGGTCTGGTGCTAATTTCTTTCAAATTAAATGGAATTTCCATTTATTAGAGGGTTCTTACATTGAACTTTATGCAGTGCACACGCACTCCCCGAGCAGTATCGGAAATTGATGACGGATCAGAACTCGCCTATTGTTGATTTCTATCCTAATGGTACAAAATCTGTTTAAAAATGACTGCGTTATGGTTATCAAGTTTTGTCTCCCCTCTAACTTTTGTTTGATGCGTCAGATTTTGAAGTGGATATGAATGGTAAACGGTTTTCCTGGCAGGTTGGTTGCTTTCACCCCTTATTTTATTCTTTAATTTGATGAACTGGCTTTAGTTATGTTATGCGTTGTTGCTTCTTTTTTAATAATTTGTTCAAACTATTCTTCAGGGAATTGCAAAGTTGCCTTTCATTGATGAAACCCGCCTTCTTGCAGAGGTTGAAAAAGTCGAGCATACATTGACGGTGTGTTACTAACTTGTGGTTCAGACATCCTTGATGAGGTCTAGATGATCCATATCCCTTGTCTCTTTGAATAATTAACTTTTTACATTTCTGCAGCAAGAAGAAGTGCGGAGAAATAGTGTGATGTTTGACATGCTTTTTGTCACATCTTCTCACCCCCTTTCTGTTAGTATATACTCGCTCAATGACCGCCGTAAGCTGACGGGAAGAAAACGTAATCGGGTTAAGGAAAAAATAAACCCTGAACTTAGGTTTGTATCATGTAAAAATCTTTCCTTTATGAGCATATTAATATGATCATGATGGGCACAATCACACCTTCCCCTTGTTAGCATGCAAGTTCATCAAATCTGATAAACTTAGATATGGTAGCTGAGTTAACTTTCAGACAAATATGTATTTTATGGTTCATTTTGATGCTTTATACAAGTTTTTGGGAAGGAAGGTTCTCTGGACTCCGATCTGGTTTCTAGGAAACTCCTTGGGTTCTTTACACCATTATGCTTAATTTCTCATGGAAATTTTGTTGATATTCACGTTCTTGGTAGAAGTTAGTTAATTCGAATTTGATTAAGCGTTAACTGCAGTGAAGGAATGAATGGTTATCTCTTTCCATGTTCGGGAGAGTTGTGCCCTCAAATATTCAGGTCTCCAGTTGAGGGCATGGAGGATATTATGAACAACCAAGTCATGTAAGAGTCTTGAGTACTTTATTTGATTTAACAAAACTACTCATCACGGTTTCTCCTTTGTTTCTTTTTCTTTCAAATCTAGATGTGCTATATATCGGCTTCCGGACCCACACAAGCATATCACGAAACCGCCGGCTGGGGTGAACTTTCCTCCAAGGGTACTTTATATATCTTTTAGCTTATATTGATTTTGAAACACACCAATATCCTGCTGTTGTTTAATTCACTTGACATGTCTTGCGGCAGACGGTGAGCATGAGAGACATGAAACCTGAACCTGGTTTACGGCATAAAGATACGCAACGCCACGACAATGGAAGATGCGTGGGAGACACGAGGCCTGAACCTGGTTTACAGCGTAAAGATATGCAACGCCACGACAATGGAAGATGCATGGGGGACACGAGGCCTGAACCTGGTTTACGGCATAAAGATAGGCAACGCCACGACAATGGAAGATGCAATGAGAACGCAAGGTAGTAGTATACCTACAGAAACCGGAAGAATTTCAATACATTTTTTTTCTTTCTTGTGAGTGTTCTTTCCTTGTTTTTCCAGGCCAAATGCTCCTGGAATCATTTCAGGTCGACTATTAGGGGATGCATCACGTAGGCTTGTTAACAGCTTGCTGCTGGTTAGGAGGGGAGATTCTAAGGTTGAGGACAATTGTCAGGCACTCCCACTTCCCCATACGGCACAGCCCTGCATCCTTGGGCAACCTCCTCCTTCACAGGCTCAAGAAGAAGACTACAGAATGGCAGTTGTGCCAGACCGAACTATTCCGACACAACACAACGTGTAG

mRNA sequence

ATGGGAGTTCCAGCCTTCTATAAGTGGTTAGCGGAGAAGTATCCATTGGTAGTTGCGGATGTAATAGAGGAAGCACCCGTTGTAATAGATGGCATCGCCATTCCAGTTGATACAAGCAAACCCAATCCAAACAATCTTGAATTTGATAACCTCTACCTAGACATGAATGGCATTATTCATCCATGCTTCCACCCAGAAGATAGGCCTTCTCCAACAACTTTTAGCGAGGTATTTCGTAGCATGTTTGATTATATTGATAGGCTTTTTGTCATGGTCCGGCCTAGAAAATTGCTATACATGGCTATTGATGGTGTTGCCCCTAGGGCAAAAATGAATCAACAGCGATCTCGACGGTTTAGAGCTGCAAAAGATGCAGTAGAAGCGGCCGCTGAAGAGGCACGATTAAGACAGGAGTTTGAGAGGGAGGGACGAAAGCTTCCTCCAAACGAAGAGTCACAAGTTTTTGATTCCAATGTGATCACTCCTGGAACTGACTTTATGTCTGTTCTTTCCGTTGCTTTGCAGTACTACATTCATCTTAGACTAAACAACGACCCAGGTTGGAAAGGTATTAAGGTTATTCTTTCTGATGCCAATGTTCCGGGTGAAGGGGAGCACAAAATAATGTCCTATATTCGTCTTCAGAGAAATGTTCCTGGTTTTGATCCCAATACTCGTCACTGCCTGTATGGTTTGGATGCAGATTTGATAATGTTAGCTTTGGCTACCCATGAAGTCCATTTTTCAATAATGCGTGAGATCATGTTCACTCCTGAACAGCAAAAAAAGTGCTTTCTAGCTGACCGTAAACGTAAAGCAAAGAGAAAGGCTAGCGAGTTTGATGCGAAAGGGGAAGGTGTAGTTAAAAAACCTTACCAGTTTCTCCATATATGGATACTTAGAGAGTACTTGGAACGTGAGATGTGTATTCCTAATGCTCCCGTTGAAAGTGACATTGAACGCATTGTGGATGATTTTGTGTTCATGTGTTTCTTTGTTGGTAATGACTTTTTACCTCATATGCCCACATTAGAGATTCGGGAGGGTGCAATTGACTTGCTATTGGCTGTGTATAAGAAGAAAGTAAGGGAAGTTGGTGGGTATTTGACTAAAGGAAGCAAGCCAAATTTGCGCATAGTGGAACAATTTATTCAAGCTGTTGGAAGTAATGAAGATAACATATTCCGAAGAAGAGCTAAACGGCATAAGAAGCAGGCAGGCAGAATAAAGCTCGCTAAAGCTCTGACAAGTAGAGGAGATGATGCAGGGCCTTGGGTTCAACCATCCTTAGTTGCAGTAGCTCGTTTTCATAGATCTCGTCTAGCTTCAGCTCCTTATCCTTCGCCATATGGACAATCAAGAAAAGCCACGTCCAGATTCTCAGGACTGAAAAATAAGAATATGCAACGTCCTAACAAAGTTGCACGTCCATCGTCTGGGGATTCTATTGGTTCTGCCATCGTTGAAGCAGAAAACACTTCGGAAATAGATATCCATGAGAACAGCAAGGAATTGAAGACAAAGCTTAAGGAGTTTCTGCGTGAGAAGTCTGATGTTTTCAACTCTAATGATTCAGAAGTAGACAAGATTAAATTGGGCATACCTGGGTGGAGAGAAAGGTATTATAATGAGAAGTTTTCTGGAAATACTCCTGAGGAACTCGATGACATACGGAATGATGTTGTTTTGAGGTACACAGAAGGCCTATGTTGGATTATGCGCTATTATTACGAAGGCGTTTGTTCTTGGCAATGGTTTTATCCATATCATTATGCACCATTTGCTTCTGATCTCAAAGGTCTTGATAAGCTGAATATATCATTCACTCTAGGCACTCCCTTCAAGCCATTCAATCAGCTACTGGGTGTCTTCCCTGCTGCTAGTGCACACGCACTCCCCGAGCAGTATCGGAAATTGATGACGGATCAGAACTCGCCTATTGTTGATTTCTATCCTAATGATTTTGAAGTGGATATGAATGGTAAACGGTTTTCCTGGCAGGGAATTGCAAAGTTGCCTTTCATTGATGAAACCCGCCTTCTTGCAGAGGTTGAAAAAGTCGAGCATACATTGACGCAAGAAGAAGTGCGGAGAAATAGTGTGATGTTTGACATGCTTTTTGTCACATCTTCTCACCCCCTTTCTGTTAGTATATACTCGCTCAATGACCGCCGTAAGCTGACGGGAAGAAAACGTAATCGGGTTAAGGAAAAAATAAACCCTGAACTTAGTGAAGGAATGAATGGTTATCTCTTTCCATGTTCGGGAGAGTTGTGCCCTCAAATATTCAGGTCTCCAGTTGAGGGCATGGAGGATATTATGAACAACCAAGTCATATGTGCTATATATCGGCTTCCGGACCCACACAAGCATATCACGAAACCGCCGGCTGGGGTGAACTTTCCTCCAAGGACGGTGAGCATGAGAGACATGAAACCTGAACCTGGTTTACGGCATAAAGATACGCAACGCCACGACAATGGAAGATGCGTGGGAGACACGAGGCCTGAACCTGGTTTACAGCGTAAAGATATGCAACGCCACGACAATGGAAGATGCATGGGGGACACGAGGCCTGAACCTGGTTTACGGCATAAAGATAGGCAACGCCACGACAATGGAAGATGCAATGAGAACGCAAGGCCAAATGCTCCTGGAATCATTTCAGGTCGACTATTAGGGGATGCATCACGTAGGCTTGTTAACAGCTTGCTGCTGGTTAGGAGGGGAGATTCTAAGGTTGAGGACAATTGTCAGGCACTCCCACTTCCCCATACGGCACAGCCCTGCATCCTTGGGCAACCTCCTCCTTCACAGGCTCAAGAAGAAGACTACAGAATGGCAGTTGTGCCAGACCGAACTATTCCGACACAACACAACGTGTAG

Coding sequence (CDS)

ATGGGAGTTCCAGCCTTCTATAAGTGGTTAGCGGAGAAGTATCCATTGGTAGTTGCGGATGTAATAGAGGAAGCACCCGTTGTAATAGATGGCATCGCCATTCCAGTTGATACAAGCAAACCCAATCCAAACAATCTTGAATTTGATAACCTCTACCTAGACATGAATGGCATTATTCATCCATGCTTCCACCCAGAAGATAGGCCTTCTCCAACAACTTTTAGCGAGGTATTTCGTAGCATGTTTGATTATATTGATAGGCTTTTTGTCATGGTCCGGCCTAGAAAATTGCTATACATGGCTATTGATGGTGTTGCCCCTAGGGCAAAAATGAATCAACAGCGATCTCGACGGTTTAGAGCTGCAAAAGATGCAGTAGAAGCGGCCGCTGAAGAGGCACGATTAAGACAGGAGTTTGAGAGGGAGGGACGAAAGCTTCCTCCAAACGAAGAGTCACAAGTTTTTGATTCCAATGTGATCACTCCTGGAACTGACTTTATGTCTGTTCTTTCCGTTGCTTTGCAGTACTACATTCATCTTAGACTAAACAACGACCCAGGTTGGAAAGGTATTAAGGTTATTCTTTCTGATGCCAATGTTCCGGGTGAAGGGGAGCACAAAATAATGTCCTATATTCGTCTTCAGAGAAATGTTCCTGGTTTTGATCCCAATACTCGTCACTGCCTGTATGGTTTGGATGCAGATTTGATAATGTTAGCTTTGGCTACCCATGAAGTCCATTTTTCAATAATGCGTGAGATCATGTTCACTCCTGAACAGCAAAAAAAGTGCTTTCTAGCTGACCGTAAACGTAAAGCAAAGAGAAAGGCTAGCGAGTTTGATGCGAAAGGGGAAGGTGTAGTTAAAAAACCTTACCAGTTTCTCCATATATGGATACTTAGAGAGTACTTGGAACGTGAGATGTGTATTCCTAATGCTCCCGTTGAAAGTGACATTGAACGCATTGTGGATGATTTTGTGTTCATGTGTTTCTTTGTTGGTAATGACTTTTTACCTCATATGCCCACATTAGAGATTCGGGAGGGTGCAATTGACTTGCTATTGGCTGTGTATAAGAAGAAAGTAAGGGAAGTTGGTGGGTATTTGACTAAAGGAAGCAAGCCAAATTTGCGCATAGTGGAACAATTTATTCAAGCTGTTGGAAGTAATGAAGATAACATATTCCGAAGAAGAGCTAAACGGCATAAGAAGCAGGCAGGCAGAATAAAGCTCGCTAAAGCTCTGACAAGTAGAGGAGATGATGCAGGGCCTTGGGTTCAACCATCCTTAGTTGCAGTAGCTCGTTTTCATAGATCTCGTCTAGCTTCAGCTCCTTATCCTTCGCCATATGGACAATCAAGAAAAGCCACGTCCAGATTCTCAGGACTGAAAAATAAGAATATGCAACGTCCTAACAAAGTTGCACGTCCATCGTCTGGGGATTCTATTGGTTCTGCCATCGTTGAAGCAGAAAACACTTCGGAAATAGATATCCATGAGAACAGCAAGGAATTGAAGACAAAGCTTAAGGAGTTTCTGCGTGAGAAGTCTGATGTTTTCAACTCTAATGATTCAGAAGTAGACAAGATTAAATTGGGCATACCTGGGTGGAGAGAAAGGTATTATAATGAGAAGTTTTCTGGAAATACTCCTGAGGAACTCGATGACATACGGAATGATGTTGTTTTGAGGTACACAGAAGGCCTATGTTGGATTATGCGCTATTATTACGAAGGCGTTTGTTCTTGGCAATGGTTTTATCCATATCATTATGCACCATTTGCTTCTGATCTCAAAGGTCTTGATAAGCTGAATATATCATTCACTCTAGGCACTCCCTTCAAGCCATTCAATCAGCTACTGGGTGTCTTCCCTGCTGCTAGTGCACACGCACTCCCCGAGCAGTATCGGAAATTGATGACGGATCAGAACTCGCCTATTGTTGATTTCTATCCTAATGATTTTGAAGTGGATATGAATGGTAAACGGTTTTCCTGGCAGGGAATTGCAAAGTTGCCTTTCATTGATGAAACCCGCCTTCTTGCAGAGGTTGAAAAAGTCGAGCATACATTGACGCAAGAAGAAGTGCGGAGAAATAGTGTGATGTTTGACATGCTTTTTGTCACATCTTCTCACCCCCTTTCTGTTAGTATATACTCGCTCAATGACCGCCGTAAGCTGACGGGAAGAAAACGTAATCGGGTTAAGGAAAAAATAAACCCTGAACTTAGTGAAGGAATGAATGGTTATCTCTTTCCATGTTCGGGAGAGTTGTGCCCTCAAATATTCAGGTCTCCAGTTGAGGGCATGGAGGATATTATGAACAACCAAGTCATATGTGCTATATATCGGCTTCCGGACCCACACAAGCATATCACGAAACCGCCGGCTGGGGTGAACTTTCCTCCAAGGACGGTGAGCATGAGAGACATGAAACCTGAACCTGGTTTACGGCATAAAGATACGCAACGCCACGACAATGGAAGATGCGTGGGAGACACGAGGCCTGAACCTGGTTTACAGCGTAAAGATATGCAACGCCACGACAATGGAAGATGCATGGGGGACACGAGGCCTGAACCTGGTTTACGGCATAAAGATAGGCAACGCCACGACAATGGAAGATGCAATGAGAACGCAAGGCCAAATGCTCCTGGAATCATTTCAGGTCGACTATTAGGGGATGCATCACGTAGGCTTGTTAACAGCTTGCTGCTGGTTAGGAGGGGAGATTCTAAGGTTGAGGACAATTGTCAGGCACTCCCACTTCCCCATACGGCACAGCCCTGCATCCTTGGGCAACCTCCTCCTTCACAGGCTCAAGAAGAAGACTACAGAATGGCAGTTGTGCCAGACCGAACTATTCCGACACAACACAACGTGTAG

Protein sequence

MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIHPCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHLRLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLALATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWILREYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKKKVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGDDAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSGDSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRERYYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKGLDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMNGKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYSLNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEPGLQRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDNGRCNENARPNAPGIISGRLLGDASRRLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQHNV

Homology

[Close]

BLAST of Csor.00g286880 vs. ExPASy Swiss-Prot
Match: Q9FQ03 (5'-3' exoribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=XRN3 PE=1 SV=1)

HSP 1 Score: 1226.1 bits (3171), Expect = 0.0e+00
Identity = 627/920 (68.15%), Postives = 717/920 (77.93%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVP+FY+WLAEKYPL+VADVIEE PV I+GI IPVDTSKPNPNNLE+DNLYLDMNGIIH
Sbjct: 1   MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSPTTF EVF+ MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61  PCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           +AKDA +AAAEE RLR+EFEREGR+LPP  +SQVFDSNVITPGT+FM VLS+ALQYY+HL
Sbjct: 121 SAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLN+D GWK IKVILSDANVPGEGEHKIMSYIRLQRN+PGFDPNTRHCLYGLDADLIML 
Sbjct: 181 RLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADR--------KRKAKRKASEFDAKGEG--VVKK 300
           LATHEVHFSI+RE+++TP QQ++CFL  +        + K K++A E D KG+G   VKK
Sbjct: 241 LATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKK 300

Query: 301 PYQFLHIWILREYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGA 360
           PYQFLHIW+LREYLE EM IPN P E D+ERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGA 360

Query: 361 IDLLLAVYKKKVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIK 420
           I+LL+AVYKK+ R   GYLT G KPNL+ VEQFIQAVGS ED IF++RA +H++QA R+K
Sbjct: 361 INLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVK 420

Query: 421 LAKA--LTSRGDDAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNM 480
             KA   T R DD  P VQP LV VARF  SRLASAP PSP+              N   
Sbjct: 421 RDKAGKATKRMDDEAPTVQPDLVPVARFSGSRLASAPTPSPF------------QSNDGR 480

Query: 481 QRPN-KVARPSSGDSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEV 540
             P+ KV R S G S+G+AIV+ EN+ E D  EN +ELKTKLKE +REKSD FNS+ +E 
Sbjct: 481 SAPHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKELIREKSDAFNSDTTEE 540

Query: 541 DKIKLGIPGWRERYYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFY 600
           DK+KLG PGWRERYY EKFS  TPEE++ +R DVVL+YTEGLCW+M YY EGVCSWQWFY
Sbjct: 541 DKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFY 600

Query: 601 PYHYAPFASDLKGLDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPI 660
           PYHYAPFASDLK L +++I F LGTPFKPFNQLLGVFPAAS+HALPE+YR LMTD NSPI
Sbjct: 601 PYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPI 660

Query: 661 VDFYPNDFEVDMNGKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLF 720
           +DFYP DFEVDMNGKRFSWQGIAKLPFIDE RLL  V +VE TLT EE RRNS M DMLF
Sbjct: 661 IDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLF 720

Query: 721 VTSSHPLSVSIYSL-NDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSP 780
           + +SH L+  ++SL N  R+L+ R+R   K KI P+LS+GMNGYL PCSGE  P +FRSP
Sbjct: 721 IATSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLSDGMNGYLTPCSGETHPPVFRSP 780

Query: 781 VEGMEDIMNNQVICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHD 840
           +EGMEDI+ NQVIC IYRLPD H+HIT+PP GV FP +TV + D+KP P L H+      
Sbjct: 781 MEGMEDILTNQVICCIYRLPDAHEHITRPPPGVIFPKKTVDIGDLKPPPALWHE------ 840

Query: 841 NGRCVGDTRPEPGLQRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDN-GRCNENARPNAP 900
                                 DNGR     RP     H +   H+N G  N   R N P
Sbjct: 841 ----------------------DNGR-----RP----MHNNHGMHNNHGMHNNQGRQNPP 871

Query: 901 GIISGRLLGDASRRLVNSLL 906
           G +SGR LG+A+ RLV++ L
Sbjct: 901 GSVSGRHLGNAAHRLVSNSL 871

[Close]

BLAST of Csor.00g286880 vs. ExPASy Swiss-Prot
Match: Q9FQ02 (5'-3' exoribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=XRN2 PE=1 SV=1)

HSP 1 Score: 1002.3 bits (2590), Expect = 3.8e-291
Identity = 506/836 (60.53%), Postives = 626/836 (74.88%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVID--GIAIPVDTSKPNPNNLEFDNLYLDMNGI 60
           MGVP+FY+WL ++YPL + +VIEE P+ ++  G+ IP+D+SKPNPN  E+DNLYLDMNGI
Sbjct: 1   MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 61  IHPCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 120
           IHPCFHPED+PSPTTF+EVF+ MFDYIDRLFVMVRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61  IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120

Query: 121 FRAAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYI 180
           FRAAKDA EAAAEE +LR+EFEREG+KLPP  +SQVFDSNVITPGT+FM+ LS AL+YYI
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180

Query: 181 HLRLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIM 240
           H+RLN+DPGWK IKVILSDANVPGEGEHKIMSYIR  +N PG++PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240

Query: 241 LALATHEVHFSIMREIMFTPEQQKKCFL--------ADRKRKAKRKASEF--DAKGEGVV 300
           L+LATHE+HFSI+RE++F P ++ KCFL        AD + K KRK  E   + + + VV
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300

Query: 301 KKPYQFLHIWILREYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIRE 360
           KKPY+F++IWILREYLE +M IP A  + +++R++DDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 360

Query: 361 GAIDLLLAVYKKKVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGR 420
           GAI+LL++VYK K R    YLT  SK NLR VE+FI+AVG  E+ IF++RA+  ++Q+ R
Sbjct: 361 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 420

Query: 421 IKLAKALTSRGDDAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNM 480
            +  KA     D+A    Q S     R    +L           S  ++           
Sbjct: 421 FRRDKARDKARDNARDNAQAS-----RQFSGKLVQLDSLDEVSDSLHSSP---------- 480

Query: 481 QRPNKVARPSSGDSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVD 540
               K  R S  D+IG A VE EN+ + +  +N ++LK KLK+ LR+K D F S + E D
Sbjct: 481 --SRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQD 540

Query: 541 KIKLGIPGWRERYYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYP 600
           K+KL   GWRERYY EKF+  + EE++ IR DVVL+YTEGLCWIM YYY GVCSW WFYP
Sbjct: 541 KVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYP 600

Query: 601 YHYAPFASDLKGLDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIV 660
           YHYAPFASDLKGL+KL+I F LG+PFKPFNQLL V P+ASAHALPE YR LMT+ +SPI 
Sbjct: 601 YHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIA 660

Query: 661 DFYPNDFEVDMNGKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFV 720
           DFYP DFE+DMNGKR+SWQGI+KLPF++E RLL    +VE +LT EE+RRNS +FDMLFV
Sbjct: 661 DFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFV 720

Query: 721 TSSHPLSVSIYSLNDR-RKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPV 780
            +SHPL   I SLN R   L+  +R  + EKI+P LS+GMNGY+  C G+  P  F S V
Sbjct: 721 VASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCFCSTV 780

Query: 781 EGMEDIMNNQVICAIYRLPDPHK--HITKPPAGVNFPPRTVSMRDMKPEPGLRHKD 822
           EGMED++ NQVICAIY+LP+  +   IT     +  P +T+S+ D+K    L H+D
Sbjct: 781 EGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLKSGGLLWHED 817

[Close]

BLAST of Csor.00g286880 vs. ExPASy Swiss-Prot
Match: Q9FQ04 (5'-3' exoribonuclease 4 OS=Arabidopsis thaliana OX=3702 GN=XRN4 PE=1 SV=1)

HSP 1 Score: 832.4 bits (2149), Expect = 5.2e-240
Identity = 441/843 (52.31%), Postives = 550/843 (65.24%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVID-GIAIPVDTSKPNPNNLEFDNLYLDMNGII 60
           MGVPAFY+WLA++YP  ++DV+EE P     G  IPVD ++PNPN  EFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60

Query: 61  HPCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
           HPCFHPE +P+P T+ +VF+SMF+YID LF +VRPRK+LY+AIDGVAPRAKMNQQRSRRF
Sbjct: 61  HPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSRRF 120

Query: 121 RAAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIH 180
           RAAKDA EA AEE RLR++FE EG+ L   E+++  DSNVITPGT FM++LSVALQYYI 
Sbjct: 121 RAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYYIQ 180

Query: 181 LRLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIML 240
            RLN++PGW+ +KVILSD+NVPGEGEHKIMSYIRLQRN+PGFDPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ALATHEVHFSIMREIMFTPEQQKKCFLADRKRK-----AKRKASEFDAKGEGVVKKPYQF 300
           +LATHEVHFSI+RE++  P QQ+KCF+  +          +  S   A    + KK YQF
Sbjct: 241 SLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAADIPIHKKKYQF 300

Query: 301 LHIWILREYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLL 360
           L+IW+LREYL+ E+ IP+ P   + ERI+DDFVF+CFFVGNDFLPHMPTLEIREGAI+LL
Sbjct: 301 LNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLL 360

Query: 361 LAVYKKKVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKA 420
           + VY+K+   +GGYLT   +  L  VE FIQAV  NED IF++R         RIK +  
Sbjct: 361 MHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRT--------RIKQSM- 420

Query: 421 LTSRGDDAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKV 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 480

Query: 481 ARPSSGDSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGI 540
                                    +N++E+K + +   R+ S+V    +   DKIKLG 
Sbjct: 481 -------------------------DNNEEMKQRSR---RDPSEV--PPEPIDDKIKLGE 540

Query: 541 PGWRERYYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPF 600
           PG++ERYY EKFS   PEE + I+ D+VL+Y EGLCW+ RYYY+GVCSWQWFYPYHYAPF
Sbjct: 541 PGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPF 600

Query: 601 ASDLKGLDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPND 660
           ASDLK L  L I+F +G PFKPF+QL+G  PAAS++ALP +YRKLMTD +SPI+ FYP D
Sbjct: 601 ASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTDPSSPILKFYPAD 660

Query: 661 FEVDMNGKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPL 720
           FE+DMNGKRF+WQGIAKLPFI+E  LLA   K+E TLT EE +RNSVM D+L+V  +HPL
Sbjct: 661 FELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNSVMLDLLYVHPAHPL 720

Query: 721 SVSIYSLNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIM 780
              I       +        +   I+P  S+GMNG+L+            SPV G+  I 
Sbjct: 721 GQRILQYYHFYQHM-PPHECLPWMIDPNSSQGMNGFLWFSERNGFQTRVDSPVNGLPCIE 740

Query: 781 NNQVICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDT 838
            N+ +   Y  P  H HI++PP G   P + ++  D+KP P L H+D   + N R     
Sbjct: 781 QNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSVDIKPFPPLWHED---NSNRRRQARD 740

[Close]

BLAST of Csor.00g286880 vs. ExPASy Swiss-Prot
Match: Q5ZIP4 (5'-3' exoribonuclease 2 OS=Gallus gallus OX=9031 GN=XRN2 PE=2 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 2.7e-196
Identity = 394/887 (44.42%), Postives = 512/887 (57.72%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAF++WL+ KYP ++ + +EE     +G+   VDTSKPNPN +EFDNLYLDMNGIIH
Sbjct: 1   MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKASVDTSKPNPNEVEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PC HPED+P+P    E+  ++F+YIDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61  PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           A+K+ +EAA E+ ++RQE   +G  LPP E  + FDSN ITPGT+FM  L+  L+YYI  
Sbjct: 121 ASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLN+DPGWK + VILSDA+ PGEGEHKIM YIR QR  P  DPNT HCL G DADLIML 
Sbjct: 181 RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADR-----------KRKAKRKASEFDAKGEGVVK 300
           LATHE HF+I+RE  F P + K C L ++            R+ + K  +F A      +
Sbjct: 241 LATHEPHFTIIRE-EFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQF-ADSLPASE 300

Query: 301 KPYQFLHIWILREYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREG 360
           + + F+ + +LREYLERE+ + + P   D ER VDD+VFMCFFVGNDFLPH+P+LEIREG
Sbjct: 301 QEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 360

Query: 361 AIDLLLAVYKKKVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRI 420
           AID L+ +YK  V + GGYLT+    NL+ V+  + AVG  ED+IF++R         R 
Sbjct: 361 AIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQ 420

Query: 421 KLAKALTSRGDDAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKAT--SRFSGLKNKN 480
           K  K    R         PS +   +F    L +   P      R+     R    +N  
Sbjct: 421 KEKKKRMKRD-------HPSFIPGGQFSPQALGNRSSPQAISNPRQTAFEMRMHDRQNST 480

Query: 481 MQRPNKVARPSSGDSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEV 540
           M  PN         S    I                          + KS+  +S     
Sbjct: 481 MSSPNTSLNSDGSPSPARGI--------------------------KRKSEDSDSEPEPE 540

Query: 541 DKIKLGIPGWRERYYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFY 600
           D I+L   GW++RYY  KF  +  +E    R  VV  Y EGLCW++RYYY+G  SW W+Y
Sbjct: 541 DNIRLWESGWKQRYYKNKFDVDASDE--KFRRKVVQSYVEGLCWVLRYYYQGCASWNWYY 600

Query: 601 PYHYAPFASDLKGLDKLNISFTLGT-PFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSP 660
           P+HYAPFASD +G+  +   F  G+ PFKP  QL+GVFPAAS + LP  +RKLMTD  S 
Sbjct: 601 PFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPESS 660

Query: 661 IVDFYPNDFEVDMNGKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDML 720
           I+DFYP DF +D+NGK+++WQG+A LPF+DE RL A +E+V   LT EE RRNS+  D+L
Sbjct: 661 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 720

Query: 721 FVTSSHPLSVSIYSLNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCP-QIFRS 780
           FV   HPL   I           + +N     + PEL  G+ G L P    + P +   S
Sbjct: 721 FVGKHHPLCDFIVE-------QYKSKNTEPVDMPPELCYGIQGKLTPNENAVLPDKTVES 780

Query: 781 PVEGMEDIMNNQVICAIYRLPD-PHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQR 840
           PV  + D+  N  +   ++ P      I K          TV     KP P L+  D ++
Sbjct: 781 PVPMLRDLTQNSAVSISFKDPQFDEDFIFK---------ATVLPGAKKPPPVLKPGDWEK 831

Query: 841 HDN-GRCVGDTRPEPGLQRKDMQRHDN-------GRCMGDTRPEPGL 864
            +N GR     RP+ G  R     H +       G  M   R  PG+
Sbjct: 841 TNNDGR---PWRPQLGFNRDRKPVHLDQSAFRTLGHAMPRERGMPGM 831

[Close]

BLAST of Csor.00g286880 vs. ExPASy Swiss-Prot
Match: Q5R4L5 (5'-3' exoribonuclease 2 OS=Pongo abelii OX=9601 GN=XRN2 PE=2 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 7.8e-196
Identity = 390/864 (45.14%), Postives = 516/864 (59.72%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAF++WL+ KYP ++ + +EE P   +G+ IPVD SKPNPN++EFDNLYLDMNGIIH
Sbjct: 1   MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PC HPED+P+P    E+  ++F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61  PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           A+K+ +EAA E+ R+R+E   +G  LPP E  + FDSN ITPGT+FM  L+  L+YYI  
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWK + VILSDA+ PGEGEHKIM YIR QR  P  DPNT HCL G DADLIML 
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADR-----------KRKAKRKASEFDAKGEGVVK 300
           LATHE +F+I+RE  F P + K C L ++            R+ K K  E  A      +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLLREKKVKHDEL-ADSLPCAE 300

Query: 301 KPYQFLHIWILREYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREG 360
             + FL + +LREYLERE+ + + P   D+ER +DD+VFMCFFVGNDFLPH+P+LEIRE 
Sbjct: 301 GEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREN 360

Query: 361 AIDLLLAVYKKKVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRR-------AKRH 420
           AID L+ +YK  V + GGYLT+    NL+ V+  + AVG  ED+IF++R        +R 
Sbjct: 361 AIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ 420

Query: 421 KKQAGRIKLAK-ALTSRGDDAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFS 480
           K++  R+K  + A T  G      + P  +       S++AS P  + Y        R  
Sbjct: 421 KEKRKRMKRDQPAFTPSG-----ILTPHALGSRNSPGSQVASNPRQAAY------EMRMQ 480

Query: 481 GLKNKNMQRPNKVARPSSGDSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFN 540
              + ++          S   IG                            ++ K++  +
Sbjct: 481 NNSSPSISPNTSFTSDGSPSPIGG---------------------------IKRKAEDSD 540

Query: 541 SNDSEVDKIKLGIPGWRERYYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVC 600
           S     D ++L   GW++RYY  KF  +  +E    R  VV  Y EGLCW++RYYY+G  
Sbjct: 541 SEPEPEDNVRLWEAGWKQRYYKNKFDADAADE--KFRRKVVQSYVEGLCWVLRYYYQGCA 600

Query: 601 SWQWFYPYHYAPFASDLKGLDKLNISFTLGT-PFKPFNQLLGVFPAASAHALPEQYRKLM 660
           SW+W+YP+HYAPFASD +G+  +   F  GT PFKP  QL+GVFPAAS + LP  +RKLM
Sbjct: 601 SWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLM 660

Query: 661 TDQNSPIVDFYPNDFEVDMNGKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNS 720
           +D +S I+DFYP DF +D+NGK+++WQG+A LPF+DE RL A +E+V   LT EE RRNS
Sbjct: 661 SDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNS 720

Query: 721 VMFDMLFVTSSHPLSVSIYSLNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCP 780
           +  D+LFV   HPL   I  L      TG   +     + PEL  G+ G        + P
Sbjct: 721 LGGDVLFVGKHHPLHDFILELYQ----TG---STEPVDVPPELCHGIQGKFSLDEEAILP 780

Query: 781 -QIFRSPVEGMEDIMNNQVICAIYRLPD-PHKHITKPPAGVNFPPRTVSMRDMKPEPGLR 840
            QI  SPV  + D+  N V+   ++ P     +I K    V  P         KP   L+
Sbjct: 781 DQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFK---AVMLPGA------RKPAAVLK 803

Query: 841 HKDTQRHDNGRCVGDTRPEPGLQR 843
             D ++  NGR     +P+ G  R
Sbjct: 841 PSDWEKSSNGR---QWKPQLGFNR 803

[Close]

BLAST of Csor.00g286880 vs. NCBI nr
Match: KAG6599006.1 (5'-3' exoribonuclease 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1951 bits (5055), Expect = 0.0
Identity = 961/961 (100.00%), Postives = 961/961 (100.00%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH
Sbjct: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL
Sbjct: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300
           LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL
Sbjct: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300

Query: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360
           REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK
Sbjct: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360

Query: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420
           KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD
Sbjct: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420

Query: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480
           DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG
Sbjct: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480

Query: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540
           DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER
Sbjct: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540

Query: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600
           YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG
Sbjct: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600

Query: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660
           LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN
Sbjct: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660

Query: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720
           GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS
Sbjct: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720

Query: 721 LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC 780
           LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC
Sbjct: 721 LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC 780

Query: 781 AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEPGL 840
           AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEPGL
Sbjct: 781 AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEPGL 840

Query: 841 QRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDNGRCNENARPNAPGIISGRLLGDASRRL 900
           QRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDNGRCNENARPNAPGIISGRLLGDASRRL
Sbjct: 841 QRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDNGRCNENARPNAPGIISGRLLGDASRRL 900

Query: 901 VNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQHN 960
           VNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQHN
Sbjct: 901 VNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQHN 960

[Close]

BLAST of Csor.00g286880 vs. NCBI nr
Match: XP_022946427.1 (5'-3' exoribonuclease 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1937 bits (5018), Expect = 0.0
Identity = 951/961 (98.96%), Postives = 956/961 (99.48%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAFYKWLAEKYPLVVADVIEEAP+VIDG+AIPVDTSKPNPNNLEFDNLYLDMNGIIH
Sbjct: 1   MGVPAFYKWLAEKYPLVVADVIEEAPIVIDGVAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSP TFSEVF SMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61  PCFHPEDRPSPRTFSEVFHSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL
Sbjct: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300
           LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL
Sbjct: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300

Query: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360
           REYLEREMCIPNAPVESD+ERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLL VYKK
Sbjct: 301 REYLEREMCIPNAPVESDVERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLTVYKK 360

Query: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420
           KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD
Sbjct: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420

Query: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480
           DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG
Sbjct: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480

Query: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540
           DSIGSAIVEAENT EIDIHEN+KELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER
Sbjct: 481 DSIGSAIVEAENTLEIDIHENNKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540

Query: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600
           YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG
Sbjct: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600

Query: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660
           LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN
Sbjct: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660

Query: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720
           GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS
Sbjct: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720

Query: 721 LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC 780
           LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC
Sbjct: 721 LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC 780

Query: 781 AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEPGL 840
           AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRC+GDTRPEPGL
Sbjct: 781 AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCMGDTRPEPGL 840

Query: 841 QRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDNGRCNENARPNAPGIISGRLLGDASRRL 900
           QRKDMQRHDNGRCMGDTRPEPGLRHKDRQRH NGRCNENARPNAPGIISGRLLGDASRRL
Sbjct: 841 QRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHGNGRCNENARPNAPGIISGRLLGDASRRL 900

Query: 901 VNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQHN 960
           VNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQHN
Sbjct: 901 VNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQHN 960

[Close]

BLAST of Csor.00g286880 vs. NCBI nr
Match: XP_022946424.1 (5'-3' exoribonuclease 3-like isoform X1 [Cucurbita moschata] >XP_022946425.1 5'-3' exoribonuclease 3-like isoform X1 [Cucurbita moschata] >XP_022946426.1 5'-3' exoribonuclease 3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1932 bits (5005), Expect = 0.0
Identity = 951/963 (98.75%), Postives = 956/963 (99.27%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAFYKWLAEKYPLVVADVIEEAP+VIDG+AIPVDTSKPNPNNLEFDNLYLDMNGIIH
Sbjct: 1   MGVPAFYKWLAEKYPLVVADVIEEAPIVIDGVAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSP TFSEVF SMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61  PCFHPEDRPSPRTFSEVFHSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL
Sbjct: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300
           LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL
Sbjct: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300

Query: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360
           REYLEREMCIPNAPVESD+ERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLL VYKK
Sbjct: 301 REYLEREMCIPNAPVESDVERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLTVYKK 360

Query: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420
           KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD
Sbjct: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420

Query: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480
           DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG
Sbjct: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480

Query: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540
           DSIGSAIVEAENT EIDIHEN+KELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER
Sbjct: 481 DSIGSAIVEAENTLEIDIHENNKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540

Query: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600
           YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG
Sbjct: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600

Query: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660
           LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN
Sbjct: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660

Query: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720
           GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS
Sbjct: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720

Query: 721 LNDRRKLTGRKRNRVKEKINPELS--EGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV 780
           LNDRRKLTGRKRNRVKEKINPELS  EGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV
Sbjct: 721 LNDRRKLTGRKRNRVKEKINPELSCSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV 780

Query: 781 ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEP 840
           ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRC+GDTRPEP
Sbjct: 781 ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCMGDTRPEP 840

Query: 841 GLQRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDNGRCNENARPNAPGIISGRLLGDASR 900
           GLQRKDMQRHDNGRCMGDTRPEPGLRHKDRQRH NGRCNENARPNAPGIISGRLLGDASR
Sbjct: 841 GLQRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHGNGRCNENARPNAPGIISGRLLGDASR 900

Query: 901 RLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQ 960
           RLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQ
Sbjct: 901 RLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQ 960

[Close]

BLAST of Csor.00g286880 vs. NCBI nr
Match: XP_022999290.1 (5'-3' exoribonuclease 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1831 bits (4744), Expect = 0.0
Identity = 919/982 (93.58%), Postives = 930/982 (94.70%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAFYKWLAEKYPLVV DVIEEAPVVIDG+AIPVDTSKPNPNNLEFDNLYLDMNGIIH
Sbjct: 1   MGVPAFYKWLAEKYPLVVVDVIEEAPVVIDGVAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSPTTFSEVF SMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF+
Sbjct: 61  PCFHPEDRPSPTTFSEVFHSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFK 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           AAKDA+EAA EEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL
Sbjct: 121 AAKDAIEAATEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300
           LATHEVHFSIMREIMFTPEQQKK FLADRKRK KRKASEFDAKGE VVKKPYQFLHIWIL
Sbjct: 241 LATHEVHFSIMREIMFTPEQQKKRFLADRKRKVKRKASEFDAKGEDVVKKPYQFLHIWIL 300

Query: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360
           REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLL VYKK
Sbjct: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLTVYKK 360

Query: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420
           KVREVGGYLTKGSKPNLRIVEQFIQAVGSNED+IFRRRAKR KKQAGRIKL+KALT RGD
Sbjct: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDDIFRRRAKRQKKQAGRIKLSKALTRRGD 420

Query: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480
           DAGPWVQPSLVAVARFHRSRLAS PYPSPYGQSRKATSRFSGLKNKNMQRPNKVAR SSG
Sbjct: 421 DAGPWVQPSLVAVARFHRSRLASGPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARLSSG 480

Query: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540
           DS GSAIVEAENT EIDIHEN+KELKTK+KEFLREKSDVFNSN SEVDKIKLGIPGWRER
Sbjct: 481 DSTGSAIVEAENTLEIDIHENNKELKTKVKEFLREKSDVFNSNGSEVDKIKLGIPGWRER 540

Query: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600
           YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGV SWQWFYPYHYAPFASDLKG
Sbjct: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVGSWQWFYPYHYAPFASDLKG 600

Query: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660
           LDKL+ISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN
Sbjct: 601 LDKLSISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660

Query: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720
           GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS
Sbjct: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720

Query: 721 LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC 780
           LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC
Sbjct: 721 LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC 780

Query: 781 AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEPGL 840
           AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLR+KDTQRH+NGRCVGDTRPEPGL
Sbjct: 781 AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRNKDTQRHENGRCVGDTRPEPGL 840

Query: 841 QRKDMQRHDNGRCMGDT-----------------------RPEPGLRHKDRQRHDNGRCN 900
           Q K+MQRHDNGRCMGD                        RPEPGLR KD Q HDNGRCN
Sbjct: 841 QHKNMQRHDNGRCMGDMKHEPGLRHKDMQCHNNGRCMGAMRPEPGLRCKDMQCHDNGRCN 900

Query: 901 ENARPNAPGIISGRLLGDASRRLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPP 959
           ENARPNA GIISGRLLGDASRRLVNSLL VRR DSKVEDNCQAL LPHTAQPCILGQPP 
Sbjct: 901 ENARPNATGIISGRLLGDASRRLVNSLL-VRRVDSKVEDNCQALSLPHTAQPCILGQPP- 960

[Close]

BLAST of Csor.00g286880 vs. NCBI nr
Match: XP_022999287.1 (5'-3' exoribonuclease 3-like isoform X1 [Cucurbita maxima] >XP_022999288.1 5'-3' exoribonuclease 3-like isoform X1 [Cucurbita maxima] >XP_022999289.1 5'-3' exoribonuclease 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1826 bits (4731), Expect = 0.0
Identity = 919/984 (93.39%), Postives = 930/984 (94.51%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAFYKWLAEKYPLVV DVIEEAPVVIDG+AIPVDTSKPNPNNLEFDNLYLDMNGIIH
Sbjct: 1   MGVPAFYKWLAEKYPLVVVDVIEEAPVVIDGVAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSPTTFSEVF SMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF+
Sbjct: 61  PCFHPEDRPSPTTFSEVFHSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFK 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           AAKDA+EAA EEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL
Sbjct: 121 AAKDAIEAATEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300
           LATHEVHFSIMREIMFTPEQQKK FLADRKRK KRKASEFDAKGE VVKKPYQFLHIWIL
Sbjct: 241 LATHEVHFSIMREIMFTPEQQKKRFLADRKRKVKRKASEFDAKGEDVVKKPYQFLHIWIL 300

Query: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360
           REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLL VYKK
Sbjct: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLTVYKK 360

Query: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420
           KVREVGGYLTKGSKPNLRIVEQFIQAVGSNED+IFRRRAKR KKQAGRIKL+KALT RGD
Sbjct: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDDIFRRRAKRQKKQAGRIKLSKALTRRGD 420

Query: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480
           DAGPWVQPSLVAVARFHRSRLAS PYPSPYGQSRKATSRFSGLKNKNMQRPNKVAR SSG
Sbjct: 421 DAGPWVQPSLVAVARFHRSRLASGPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARLSSG 480

Query: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540
           DS GSAIVEAENT EIDIHEN+KELKTK+KEFLREKSDVFNSN SEVDKIKLGIPGWRER
Sbjct: 481 DSTGSAIVEAENTLEIDIHENNKELKTKVKEFLREKSDVFNSNGSEVDKIKLGIPGWRER 540

Query: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600
           YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGV SWQWFYPYHYAPFASDLKG
Sbjct: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVGSWQWFYPYHYAPFASDLKG 600

Query: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660
           LDKL+ISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN
Sbjct: 601 LDKLSISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660

Query: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720
           GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS
Sbjct: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720

Query: 721 LNDRRKLTGRKRNRVKEKINPELS--EGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV 780
           LNDRRKLTGRKRNRVKEKINPELS  EGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV
Sbjct: 721 LNDRRKLTGRKRNRVKEKINPELSCSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV 780

Query: 781 ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEP 840
           ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLR+KDTQRH+NGRCVGDTRPEP
Sbjct: 781 ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRNKDTQRHENGRCVGDTRPEP 840

Query: 841 GLQRKDMQRHDNGRCMGDT-----------------------RPEPGLRHKDRQRHDNGR 900
           GLQ K+MQRHDNGRCMGD                        RPEPGLR KD Q HDNGR
Sbjct: 841 GLQHKNMQRHDNGRCMGDMKHEPGLRHKDMQCHNNGRCMGAMRPEPGLRCKDMQCHDNGR 900

Query: 901 CNENARPNAPGIISGRLLGDASRRLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQP 959
           CNENARPNA GIISGRLLGDASRRLVNSLL VRR DSKVEDNCQAL LPHTAQPCILGQP
Sbjct: 901 CNENARPNATGIISGRLLGDASRRLVNSLL-VRRVDSKVEDNCQALSLPHTAQPCILGQP 960

[Close]

BLAST of Csor.00g286880 vs. ExPASy TrEMBL
Match: A0A6J1G3Q2 (5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450486 PE=3 SV=1)

HSP 1 Score: 1937 bits (5018), Expect = 0.0
Identity = 951/961 (98.96%), Postives = 956/961 (99.48%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAFYKWLAEKYPLVVADVIEEAP+VIDG+AIPVDTSKPNPNNLEFDNLYLDMNGIIH
Sbjct: 1   MGVPAFYKWLAEKYPLVVADVIEEAPIVIDGVAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSP TFSEVF SMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61  PCFHPEDRPSPRTFSEVFHSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL
Sbjct: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300
           LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL
Sbjct: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300

Query: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360
           REYLEREMCIPNAPVESD+ERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLL VYKK
Sbjct: 301 REYLEREMCIPNAPVESDVERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLTVYKK 360

Query: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420
           KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD
Sbjct: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420

Query: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480
           DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG
Sbjct: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480

Query: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540
           DSIGSAIVEAENT EIDIHEN+KELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER
Sbjct: 481 DSIGSAIVEAENTLEIDIHENNKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540

Query: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600
           YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG
Sbjct: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600

Query: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660
           LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN
Sbjct: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660

Query: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720
           GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS
Sbjct: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720

Query: 721 LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC 780
           LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC
Sbjct: 721 LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC 780

Query: 781 AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEPGL 840
           AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRC+GDTRPEPGL
Sbjct: 781 AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCMGDTRPEPGL 840

Query: 841 QRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDNGRCNENARPNAPGIISGRLLGDASRRL 900
           QRKDMQRHDNGRCMGDTRPEPGLRHKDRQRH NGRCNENARPNAPGIISGRLLGDASRRL
Sbjct: 841 QRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHGNGRCNENARPNAPGIISGRLLGDASRRL 900

Query: 901 VNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQHN 960
           VNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQHN
Sbjct: 901 VNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQHN 960

[Close]

BLAST of Csor.00g286880 vs. ExPASy TrEMBL
Match: A0A6J1G3U5 (5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450486 PE=3 SV=1)

HSP 1 Score: 1932 bits (5005), Expect = 0.0
Identity = 951/963 (98.75%), Postives = 956/963 (99.27%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAFYKWLAEKYPLVVADVIEEAP+VIDG+AIPVDTSKPNPNNLEFDNLYLDMNGIIH
Sbjct: 1   MGVPAFYKWLAEKYPLVVADVIEEAPIVIDGVAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSP TFSEVF SMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61  PCFHPEDRPSPRTFSEVFHSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL
Sbjct: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300
           LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL
Sbjct: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300

Query: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360
           REYLEREMCIPNAPVESD+ERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLL VYKK
Sbjct: 301 REYLEREMCIPNAPVESDVERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLTVYKK 360

Query: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420
           KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD
Sbjct: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420

Query: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480
           DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG
Sbjct: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480

Query: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540
           DSIGSAIVEAENT EIDIHEN+KELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER
Sbjct: 481 DSIGSAIVEAENTLEIDIHENNKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540

Query: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600
           YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG
Sbjct: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600

Query: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660
           LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN
Sbjct: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660

Query: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720
           GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS
Sbjct: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720

Query: 721 LNDRRKLTGRKRNRVKEKINPELS--EGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV 780
           LNDRRKLTGRKRNRVKEKINPELS  EGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV
Sbjct: 721 LNDRRKLTGRKRNRVKEKINPELSCSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV 780

Query: 781 ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEP 840
           ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRC+GDTRPEP
Sbjct: 781 ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCMGDTRPEP 840

Query: 841 GLQRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDNGRCNENARPNAPGIISGRLLGDASR 900
           GLQRKDMQRHDNGRCMGDTRPEPGLRHKDRQRH NGRCNENARPNAPGIISGRLLGDASR
Sbjct: 841 GLQRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHGNGRCNENARPNAPGIISGRLLGDASR 900

Query: 901 RLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQ 960
           RLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQ
Sbjct: 901 RLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQ 960

[Close]

BLAST of Csor.00g286880 vs. ExPASy TrEMBL
Match: A0A6J1KF03 (5'-3' exoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111493708 PE=3 SV=1)

HSP 1 Score: 1831 bits (4744), Expect = 0.0
Identity = 919/982 (93.58%), Postives = 930/982 (94.70%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAFYKWLAEKYPLVV DVIEEAPVVIDG+AIPVDTSKPNPNNLEFDNLYLDMNGIIH
Sbjct: 1   MGVPAFYKWLAEKYPLVVVDVIEEAPVVIDGVAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSPTTFSEVF SMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF+
Sbjct: 61  PCFHPEDRPSPTTFSEVFHSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFK 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           AAKDA+EAA EEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL
Sbjct: 121 AAKDAIEAATEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300
           LATHEVHFSIMREIMFTPEQQKK FLADRKRK KRKASEFDAKGE VVKKPYQFLHIWIL
Sbjct: 241 LATHEVHFSIMREIMFTPEQQKKRFLADRKRKVKRKASEFDAKGEDVVKKPYQFLHIWIL 300

Query: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360
           REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLL VYKK
Sbjct: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLTVYKK 360

Query: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420
           KVREVGGYLTKGSKPNLRIVEQFIQAVGSNED+IFRRRAKR KKQAGRIKL+KALT RGD
Sbjct: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDDIFRRRAKRQKKQAGRIKLSKALTRRGD 420

Query: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480
           DAGPWVQPSLVAVARFHRSRLAS PYPSPYGQSRKATSRFSGLKNKNMQRPNKVAR SSG
Sbjct: 421 DAGPWVQPSLVAVARFHRSRLASGPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARLSSG 480

Query: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540
           DS GSAIVEAENT EIDIHEN+KELKTK+KEFLREKSDVFNSN SEVDKIKLGIPGWRER
Sbjct: 481 DSTGSAIVEAENTLEIDIHENNKELKTKVKEFLREKSDVFNSNGSEVDKIKLGIPGWRER 540

Query: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600
           YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGV SWQWFYPYHYAPFASDLKG
Sbjct: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVGSWQWFYPYHYAPFASDLKG 600

Query: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660
           LDKL+ISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN
Sbjct: 601 LDKLSISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660

Query: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720
           GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS
Sbjct: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720

Query: 721 LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC 780
           LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC
Sbjct: 721 LNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQVIC 780

Query: 781 AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEPGL 840
           AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLR+KDTQRH+NGRCVGDTRPEPGL
Sbjct: 781 AIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRNKDTQRHENGRCVGDTRPEPGL 840

Query: 841 QRKDMQRHDNGRCMGDT-----------------------RPEPGLRHKDRQRHDNGRCN 900
           Q K+MQRHDNGRCMGD                        RPEPGLR KD Q HDNGRCN
Sbjct: 841 QHKNMQRHDNGRCMGDMKHEPGLRHKDMQCHNNGRCMGAMRPEPGLRCKDMQCHDNGRCN 900

Query: 901 ENARPNAPGIISGRLLGDASRRLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPP 959
           ENARPNA GIISGRLLGDASRRLVNSLL VRR DSKVEDNCQAL LPHTAQPCILGQPP 
Sbjct: 901 ENARPNATGIISGRLLGDASRRLVNSLL-VRRVDSKVEDNCQALSLPHTAQPCILGQPP- 960

[Close]

BLAST of Csor.00g286880 vs. ExPASy TrEMBL
Match: A0A6J1KAH0 (5'-3' exoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111493708 PE=3 SV=1)

HSP 1 Score: 1826 bits (4731), Expect = 0.0
Identity = 919/984 (93.39%), Postives = 930/984 (94.51%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAFYKWLAEKYPLVV DVIEEAPVVIDG+AIPVDTSKPNPNNLEFDNLYLDMNGIIH
Sbjct: 1   MGVPAFYKWLAEKYPLVVVDVIEEAPVVIDGVAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSPTTFSEVF SMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF+
Sbjct: 61  PCFHPEDRPSPTTFSEVFHSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFK 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           AAKDA+EAA EEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL
Sbjct: 121 AAKDAIEAATEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300
           LATHEVHFSIMREIMFTPEQQKK FLADRKRK KRKASEFDAKGE VVKKPYQFLHIWIL
Sbjct: 241 LATHEVHFSIMREIMFTPEQQKKRFLADRKRKVKRKASEFDAKGEDVVKKPYQFLHIWIL 300

Query: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360
           REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLL VYKK
Sbjct: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLTVYKK 360

Query: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420
           KVREVGGYLTKGSKPNLRIVEQFIQAVGSNED+IFRRRAKR KKQAGRIKL+KALT RGD
Sbjct: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDDIFRRRAKRQKKQAGRIKLSKALTRRGD 420

Query: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480
           DAGPWVQPSLVAVARFHRSRLAS PYPSPYGQSRKATSRFSGLKNKNMQRPNKVAR SSG
Sbjct: 421 DAGPWVQPSLVAVARFHRSRLASGPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARLSSG 480

Query: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540
           DS GSAIVEAENT EIDIHEN+KELKTK+KEFLREKSDVFNSN SEVDKIKLGIPGWRER
Sbjct: 481 DSTGSAIVEAENTLEIDIHENNKELKTKVKEFLREKSDVFNSNGSEVDKIKLGIPGWRER 540

Query: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600
           YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGV SWQWFYPYHYAPFASDLKG
Sbjct: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVGSWQWFYPYHYAPFASDLKG 600

Query: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660
           LDKL+ISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN
Sbjct: 601 LDKLSISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660

Query: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720
           GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS
Sbjct: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720

Query: 721 LNDRRKLTGRKRNRVKEKINPELS--EGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV 780
           LNDRRKLTGRKRNRVKEKINPELS  EGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV
Sbjct: 721 LNDRRKLTGRKRNRVKEKINPELSCSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV 780

Query: 781 ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEP 840
           ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLR+KDTQRH+NGRCVGDTRPEP
Sbjct: 781 ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRNKDTQRHENGRCVGDTRPEP 840

Query: 841 GLQRKDMQRHDNGRCMGDT-----------------------RPEPGLRHKDRQRHDNGR 900
           GLQ K+MQRHDNGRCMGD                        RPEPGLR KD Q HDNGR
Sbjct: 841 GLQHKNMQRHDNGRCMGDMKHEPGLRHKDMQCHNNGRCMGAMRPEPGLRCKDMQCHDNGR 900

Query: 901 CNENARPNAPGIISGRLLGDASRRLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQP 959
           CNENARPNA GIISGRLLGDASRRLVNSLL VRR DSKVEDNCQAL LPHTAQPCILGQP
Sbjct: 901 CNENARPNATGIISGRLLGDASRRLVNSLL-VRRVDSKVEDNCQALSLPHTAQPCILGQP 960

[Close]

BLAST of Csor.00g286880 vs. ExPASy TrEMBL
Match: A0A6J1G3S4 (5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450486 PE=3 SV=1)

HSP 1 Score: 1812 bits (4694), Expect = 0.0
Identity = 906/963 (94.08%), Postives = 910/963 (94.50%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVPAFYKWLAEKYPLVVADVIEEAP+VIDG+AIPVDTSKPNPNNLEFDNLYLDMNGIIH
Sbjct: 1   MGVPAFYKWLAEKYPLVVADVIEEAPIVIDGVAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSP TFSEVF SMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61  PCFHPEDRPSPRTFSEVFHSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL
Sbjct: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300
           LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL
Sbjct: 241 LATHEVHFSIMREIMFTPEQQKKCFLADRKRKAKRKASEFDAKGEGVVKKPYQFLHIWIL 300

Query: 301 REYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLAVYKK 360
           REYLEREMCIPNAPVESD+ERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLL VYKK
Sbjct: 301 REYLEREMCIPNAPVESDVERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLLLTVYKK 360

Query: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420
           KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD
Sbjct: 361 KVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKALTSRGD 420

Query: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480
           DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG
Sbjct: 421 DAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKVARPSSG 480

Query: 481 DSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540
           DSIGSAIVEAENT EIDIHEN+KELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER
Sbjct: 481 DSIGSAIVEAENTLEIDIHENNKELKTKLKEFLREKSDVFNSNDSEVDKIKLGIPGWRER 540

Query: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600
           YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG
Sbjct: 541 YYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPFASDLKG 600

Query: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660
           LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN
Sbjct: 601 LDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPNDFEVDMN 660

Query: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720
           GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS
Sbjct: 661 GKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPLSVSIYS 720

Query: 721 LNDRRKLTGRKRNRVKEKINPELS--EGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV 780
           LNDRRKLTGRKRNRVKEKINPELS  EGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV
Sbjct: 721 LNDRRKLTGRKRNRVKEKINPELSCSEGMNGYLFPCSGELCPQIFRSPVEGMEDIMNNQV 780

Query: 781 ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDTRPEP 840
           ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRH NGRC        
Sbjct: 781 ICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHGNGRC-------- 840

Query: 841 GLQRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDNGRCNENARPNAPGIISGRLLGDASR 900
                                                 NENARPNAPGIISGRLLGDASR
Sbjct: 841 --------------------------------------NENARPNAPGIISGRLLGDASR 900

Query: 901 RLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQ 960
           RLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQ
Sbjct: 901 RLVNSLLLVRRGDSKVEDNCQALPLPHTAQPCILGQPPPSQAQEEDYRMAVVPDRTIPTQ 917

[Close]

BLAST of Csor.00g286880 vs. TAIR 10
Match: AT1G75660.1 (5'-3' exoribonuclease 3 )

HSP 1 Score: 1226.1 bits (3171), Expect = 0.0e+00
Identity = 627/920 (68.15%), Postives = 717/920 (77.93%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVIDGIAIPVDTSKPNPNNLEFDNLYLDMNGIIH 60
           MGVP+FY+WLAEKYPL+VADVIEE PV I+GI IPVDTSKPNPNNLE+DNLYLDMNGIIH
Sbjct: 1   MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60

Query: 61  PCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
           PCFHPEDRPSPTTF EVF+ MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61  PCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 121 AAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIHL 180
           +AKDA +AAAEE RLR+EFEREGR+LPP  +SQVFDSNVITPGT+FM VLS+ALQYY+HL
Sbjct: 121 SAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVHL 180

Query: 181 RLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIMLA 240
           RLN+D GWK IKVILSDANVPGEGEHKIMSYIRLQRN+PGFDPNTRHCLYGLDADLIML 
Sbjct: 181 RLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 240

Query: 241 LATHEVHFSIMREIMFTPEQQKKCFLADR--------KRKAKRKASEFDAKGEG--VVKK 300
           LATHEVHFSI+RE+++TP QQ++CFL  +        + K K++A E D KG+G   VKK
Sbjct: 241 LATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKK 300

Query: 301 PYQFLHIWILREYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGA 360
           PYQFLHIW+LREYLE EM IPN P E D+ERIVDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGA 360

Query: 361 IDLLLAVYKKKVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIK 420
           I+LL+AVYKK+ R   GYLT G KPNL+ VEQFIQAVGS ED IF++RA +H++QA R+K
Sbjct: 361 INLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVK 420

Query: 421 LAKA--LTSRGDDAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNM 480
             KA   T R DD  P VQP LV VARF  SRLASAP PSP+              N   
Sbjct: 421 RDKAGKATKRMDDEAPTVQPDLVPVARFSGSRLASAPTPSPF------------QSNDGR 480

Query: 481 QRPN-KVARPSSGDSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEV 540
             P+ KV R S G S+G+AIV+ EN+ E D  EN +ELKTKLKE +REKSD FNS+ +E 
Sbjct: 481 SAPHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKELIREKSDAFNSDTTEE 540

Query: 541 DKIKLGIPGWRERYYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFY 600
           DK+KLG PGWRERYY EKFS  TPEE++ +R DVVL+YTEGLCW+M YY EGVCSWQWFY
Sbjct: 541 DKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFY 600

Query: 601 PYHYAPFASDLKGLDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPI 660
           PYHYAPFASDLK L +++I F LGTPFKPFNQLLGVFPAAS+HALPE+YR LMTD NSPI
Sbjct: 601 PYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPI 660

Query: 661 VDFYPNDFEVDMNGKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLF 720
           +DFYP DFEVDMNGKRFSWQGIAKLPFIDE RLL  V +VE TLT EE RRNS M DMLF
Sbjct: 661 IDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLF 720

Query: 721 VTSSHPLSVSIYSL-NDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSP 780
           + +SH L+  ++SL N  R+L+ R+R   K KI P+LS+GMNGYL PCSGE  P +FRSP
Sbjct: 721 IATSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLSDGMNGYLTPCSGETHPPVFRSP 780

Query: 781 VEGMEDIMNNQVICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHD 840
           +EGMEDI+ NQVIC IYRLPD H+HIT+PP GV FP +TV + D+KP P L H+      
Sbjct: 781 MEGMEDILTNQVICCIYRLPDAHEHITRPPPGVIFPKKTVDIGDLKPPPALWHE------ 840

Query: 841 NGRCVGDTRPEPGLQRKDMQRHDNGRCMGDTRPEPGLRHKDRQRHDN-GRCNENARPNAP 900
                                 DNGR     RP     H +   H+N G  N   R N P
Sbjct: 841 ----------------------DNGR-----RP----MHNNHGMHNNHGMHNNQGRQNPP 871

Query: 901 GIISGRLLGDASRRLVNSLL 906
           G +SGR LG+A+ RLV++ L
Sbjct: 901 GSVSGRHLGNAAHRLVSNSL 871

[Close]

BLAST of Csor.00g286880 vs. TAIR 10
Match: AT5G42540.1 (exoribonuclease 2 )

HSP 1 Score: 1002.3 bits (2590), Expect = 2.7e-292
Identity = 506/836 (60.53%), Postives = 626/836 (74.88%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVID--GIAIPVDTSKPNPNNLEFDNLYLDMNGI 60
           MGVP+FY+WL ++YPL + +VIEE P+ ++  G+ IP+D+SKPNPN  E+DNLYLDMNGI
Sbjct: 1   MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 61  IHPCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 120
           IHPCFHPED+PSPTTF+EVF+ MFDYIDRLFVMVRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61  IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120

Query: 121 FRAAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYI 180
           FRAAKDA EAAAEE +LR+EFEREG+KLPP  +SQVFDSNVITPGT+FM+ LS AL+YYI
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180

Query: 181 HLRLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIM 240
           H+RLN+DPGWK IKVILSDANVPGEGEHKIMSYIR  +N PG++PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240

Query: 241 LALATHEVHFSIMREIMFTPEQQKKCFL--------ADRKRKAKRKASEF--DAKGEGVV 300
           L+LATHE+HFSI+RE++F P ++ KCFL        AD + K KRK  E   + + + VV
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300

Query: 301 KKPYQFLHIWILREYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIRE 360
           KKPY+F++IWILREYLE +M IP A  + +++R++DDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 360

Query: 361 GAIDLLLAVYKKKVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGR 420
           GAI+LL++VYK K R    YLT  SK NLR VE+FI+AVG  E+ IF++RA+  ++Q+ R
Sbjct: 361 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 420

Query: 421 IKLAKALTSRGDDAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNM 480
            +  KA     D+A    Q S     R    +L           S  ++           
Sbjct: 421 FRRDKARDKARDNARDNAQAS-----RQFSGKLVQLDSLDEVSDSLHSSP---------- 480

Query: 481 QRPNKVARPSSGDSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVD 540
               K  R S  D+IG A VE EN+ + +  +N ++LK KLK+ LR+K D F S + E D
Sbjct: 481 --SRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQD 540

Query: 541 KIKLGIPGWRERYYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYP 600
           K+KL   GWRERYY EKF+  + EE++ IR DVVL+YTEGLCWIM YYY GVCSW WFYP
Sbjct: 541 KVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYP 600

Query: 601 YHYAPFASDLKGLDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIV 660
           YHYAPFASDLKGL+KL+I F LG+PFKPFNQLL V P+ASAHALPE YR LMT+ +SPI 
Sbjct: 601 YHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIA 660

Query: 661 DFYPNDFEVDMNGKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFV 720
           DFYP DFE+DMNGKR+SWQGI+KLPF++E RLL    +VE +LT EE+RRNS +FDMLFV
Sbjct: 661 DFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFV 720

Query: 721 TSSHPLSVSIYSLNDR-RKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPV 780
            +SHPL   I SLN R   L+  +R  + EKI+P LS+GMNGY+  C G+  P  F S V
Sbjct: 721 VASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCFCSTV 780

Query: 781 EGMEDIMNNQVICAIYRLPDPHK--HITKPPAGVNFPPRTVSMRDMKPEPGLRHKD 822
           EGMED++ NQVICAIY+LP+  +   IT     +  P +T+S+ D+K    L H+D
Sbjct: 781 EGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLKSGGLLWHED 817

[Close]

BLAST of Csor.00g286880 vs. TAIR 10
Match: AT5G42540.2 (exoribonuclease 2 )

HSP 1 Score: 995.0 bits (2571), Expect = 4.3e-290
Identity = 507/847 (59.86%), Postives = 626/847 (73.91%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVID--GIAIPVDTSKPNPNNLEFDNLYLDMNGI 60
           MGVP+FY+WL ++YPL + +VIEE P+ ++  G+ IP+D+SKPNPN  E+DNLYLDMNGI
Sbjct: 1   MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 61  IHPCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 120
           IHPCFHPED+PSPTTF+EVF+ MFDYIDRLFVMVRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61  IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120

Query: 121 FRAAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYI 180
           FRAAKDA EAAAEE +LR+EFEREG+KLPP  +SQVFDSNVITPGT+FM+ LS AL+YYI
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180

Query: 181 HLRLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIM 240
           H+RLN+DPGWK IKVILSDANVPGEGEHKIMSYIR  +N PG++PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240

Query: 241 LALATHEVHFSIMREIMFTPEQQKKCFL--------ADRKRKAKRKASEF--DAKGEGVV 300
           L+LATHE+HFSI+RE++F P ++ KCFL        AD + K KRK  E   + + + VV
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300

Query: 301 KKPYQFLHIWILREYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIRE 360
           KKPY+F++IWILREYLE +M IP A  + +++R++DDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 360

Query: 361 GAIDLLLAVYKKKVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGR 420
           GAI+LL++VYK K R    YLT  SK NLR VE+FI+AVG  E+ IF++RA+  ++Q+ R
Sbjct: 361 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 420

Query: 421 IKLAKALTSRGDDAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNM 480
            +  KA     D+A    Q S     R    +L           S  ++           
Sbjct: 421 FRRDKARDKARDNARDNAQAS-----RQFSGKLVQLDSLDEVSDSLHSSP---------- 480

Query: 481 QRPNKVARPSSGDSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVD 540
               K  R S  D+IG A VE EN+ + +  +N ++LK KLK+ LR+K D F S + E D
Sbjct: 481 --SRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQD 540

Query: 541 KIKLGIPGWRERYYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYP 600
           K+KL   GWRERYY EKF+  + EE++ IR DVVL+YTEGLCWIM YYY GVCSW WFYP
Sbjct: 541 KVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYP 600

Query: 601 YHYAPFASDLKGLDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIV 660
           YHYAPFASDLKGL+KL+I F LG+PFKPFNQLL V P+ASAHALPE YR LMT+ +SPI 
Sbjct: 601 YHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIA 660

Query: 661 DFYPNDFEVDMNGKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFV 720
           DFYP DFE+DMNGKR+SWQGI+KLPF++E RLL    +VE +LT EE+RRNS +FDMLFV
Sbjct: 661 DFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFV 720

Query: 721 TSSHPLSVSIYSLNDR-RKLTGRKRNRVKEKINPELSE-----------GMNGYLFPCSG 780
            +SHPL   I SLN R   L+  +R  + EKI+P LSE           GMNGY+  C G
Sbjct: 721 VASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSEHIQKFLDVCSDGMNGYIASCGG 780

Query: 781 ELCPQIFRSPVEGMEDIMNNQVICAIYRLPDPHK--HITKPPAGVNFPPRTVSMRDMKPE 822
           +  P  F S VEGMED++ NQVICAIY+LP+  +   IT     +  P +T+S+ D+K  
Sbjct: 781 DSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLKSG 828

[Close]

BLAST of Csor.00g286880 vs. TAIR 10
Match: AT1G54490.1 (exoribonuclease 4 )

HSP 1 Score: 832.4 bits (2149), Expect = 3.7e-241
Identity = 441/843 (52.31%), Postives = 550/843 (65.24%), Query Frame = 0


Query: 1   MGVPAFYKWLAEKYPLVVADVIEEAPVVID-GIAIPVDTSKPNPNNLEFDNLYLDMNGII 60
           MGVPAFY+WLA++YP  ++DV+EE P     G  IPVD ++PNPN  EFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60

Query: 61  HPCFHPEDRPSPTTFSEVFRSMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
           HPCFHPE +P+P T+ +VF+SMF+YID LF +VRPRK+LY+AIDGVAPRAKMNQQRSRRF
Sbjct: 61  HPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSRRF 120

Query: 121 RAAKDAVEAAAEEARLRQEFEREGRKLPPNEESQVFDSNVITPGTDFMSVLSVALQYYIH 180
           RAAKDA EA AEE RLR++FE EG+ L   E+++  DSNVITPGT FM++LSVALQYYI 
Sbjct: 121 RAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYYIQ 180

Query: 181 LRLNNDPGWKGIKVILSDANVPGEGEHKIMSYIRLQRNVPGFDPNTRHCLYGLDADLIML 240
            RLN++PGW+ +KVILSD+NVPGEGEHKIMSYIRLQRN+PGFDPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ALATHEVHFSIMREIMFTPEQQKKCFLADRKRK-----AKRKASEFDAKGEGVVKKPYQF 300
           +LATHEVHFSI+RE++  P QQ+KCF+  +          +  S   A    + KK YQF
Sbjct: 241 SLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAADIPIHKKKYQF 300

Query: 301 LHIWILREYLEREMCIPNAPVESDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGAIDLL 360
           L+IW+LREYL+ E+ IP+ P   + ERI+DDFVF+CFFVGNDFLPHMPTLEIREGAI+LL
Sbjct: 301 LNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLL 360

Query: 361 LAVYKKKVREVGGYLTKGSKPNLRIVEQFIQAVGSNEDNIFRRRAKRHKKQAGRIKLAKA 420
           + VY+K+   +GGYLT   +  L  VE FIQAV  NED IF++R         RIK +  
Sbjct: 361 MHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRT--------RIKQSM- 420

Query: 421 LTSRGDDAGPWVQPSLVAVARFHRSRLASAPYPSPYGQSRKATSRFSGLKNKNMQRPNKV 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 480

Query: 481 ARPSSGDSIGSAIVEAENTSEIDIHENSKELKTKLKEFLREKSDVFNSNDSEVDKIKLGI 540
                                    +N++E+K + +   R+ S+V    +   DKIKLG 
Sbjct: 481 -------------------------DNNEEMKQRSR---RDPSEV--PPEPIDDKIKLGE 540

Query: 541 PGWRERYYNEKFSGNTPEELDDIRNDVVLRYTEGLCWIMRYYYEGVCSWQWFYPYHYAPF 600
           PG++ERYY EKFS   PEE + I+ D+VL+Y EGLCW+ RYYY+GVCSWQWFYPYHYAPF
Sbjct: 541 PGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPF 600

Query: 601 ASDLKGLDKLNISFTLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPIVDFYPND 660
           ASDLK L  L I+F +G PFKPF+QL+G  PAAS++ALP +YRKLMTD +SPI+ FYP D
Sbjct: 601 ASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTDPSSPILKFYPAD 660

Query: 661 FEVDMNGKRFSWQGIAKLPFIDETRLLAEVEKVEHTLTQEEVRRNSVMFDMLFVTSSHPL 720
           FE+DMNGKRF+WQGIAKLPFI+E  LLA   K+E TLT EE +RNSVM D+L+V  +HPL
Sbjct: 661 FELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNSVMLDLLYVHPAHPL 720

Query: 721 SVSIYSLNDRRKLTGRKRNRVKEKINPELSEGMNGYLFPCSGELCPQIFRSPVEGMEDIM 780
              I       +        +   I+P  S+GMNG+L+            SPV G+  I 
Sbjct: 721 GQRILQYYHFYQHM-PPHECLPWMIDPNSSQGMNGFLWFSERNGFQTRVDSPVNGLPCIE 740

Query: 781 NNQVICAIYRLPDPHKHITKPPAGVNFPPRTVSMRDMKPEPGLRHKDTQRHDNGRCVGDT 838
            N+ +   Y  P  H HI++PP G   P + ++  D+KP P L H+D   + N R     
Sbjct: 781 QNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSVDIKPFPPLWHED---NSNRRRQARD 740

The following BLAST results are available for this feature:

BLAST of Csor.00g286880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FQ03	0.0e+00	68.15	5'-3' exoribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=XRN3 PE=1 SV=1	[more]
Q9FQ02	3.8e-291	60.53	5'-3' exoribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=XRN2 PE=1 SV=1	[more]
Q9FQ04	5.2e-240	52.31	5'-3' exoribonuclease 4 OS=Arabidopsis thaliana OX=3702 GN=XRN4 PE=1 SV=1	[more]
Q5ZIP4	2.7e-196	44.42	5'-3' exoribonuclease 2 OS=Gallus gallus OX=9031 GN=XRN2 PE=2 SV=1	[more]
Q5R4L5	7.8e-196	45.14	5'-3' exoribonuclease 2 OS=Pongo abelii OX=9601 GN=XRN2 PE=2 SV=1	[more]

BLAST of Csor.00g286880 vs. NCBI nr


Match Name	Identity	Description
KAG6599006.1	100.00	5'-3' exoribonuclease 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946427.1	98.96	5'-3' exoribonuclease 3-like isoform X2 [Cucurbita moschata]	[more]
XP_022946424.1	98.75	5'-3' exoribonuclease 3-like isoform X1 [Cucurbita moschata] >XP_022946425.1 5'-...	[more]
XP_022999290.1	93.58	5'-3' exoribonuclease 3-like isoform X2 [Cucurbita maxima]	[more]
XP_022999287.1	93.39	5'-3' exoribonuclease 3-like isoform X1 [Cucurbita maxima] >XP_022999288.1 5'-3'...	[more]

BLAST of Csor.00g286880 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1G3Q2	98.96	5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450486 PE=3 SV=1	[more]
A0A6J1G3U5	98.75	5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450486 PE=3 SV=1	[more]
A0A6J1KF03	93.58	5'-3' exoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111493708 PE=3 SV=1	[more]
A0A6J1KAH0	93.39	5'-3' exoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111493708 PE=3 SV=1	[more]
A0A6J1G3S4	94.08	5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450486 PE=3 SV=1	[more]

BLAST of Csor.00g286880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75660.1	0.0e+00	68.15	5'-3' exoribonuclease 3	[more]
AT5G42540.1	2.7e-292	60.53	exoribonuclease 2	[more]
AT5G42540.2	4.3e-290	59.86	exoribonuclease 2	[more]
AT1G54490.1	3.7e-241	52.31	exoribonuclease 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.25.40.1050		coord: 599..701 e-value: 4.1E-35 score: 123.3
None	No IPR available	GENE3D	3.40.50.12390		coord: 148..383 e-value: 7.6E-59 score: 201.4 coord: 1..135 e-value: 1.4E-46 score: 161.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 814..877
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 814..882
None	No IPR available	PANTHER	PTHR12341:SF56	5'-3' EXORIBONUCLEASE	coord: 1..827
None	No IPR available	CDD	cd18673	PIN_XRN1-2-like	coord: 51..304 e-value: 6.34427E-145 score: 428.537
IPR017151	5'-3' exoribonuclease type 2	PIRSF	PIRSF037239	Exonuclease_Xrn2	coord: 1..895 e-value: 0.0 score: 1199.3
IPR041412	Xrn1, helical domain	PFAM	PF17846	XRN_M	coord: 317..811 e-value: 1.7E-165 score: 551.3
IPR004859	Putative 5-3 exonuclease	PFAM	PF03159	XRN_N	coord: 1..253 e-value: 1.0E-97 score: 326.4
IPR027073	5'-3' exoribonuclease	PANTHER	PTHR12341	5'->3' EXORIBONUCLEASE	coord: 1..827

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g286880.m01	Csor.00g286880.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010587	miRNA catabolic process
biological_process	GO:0006397	mRNA processing
biological_process	GO:0060149	negative regulation of posttranscriptional gene silencing
biological_process	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0000967	rRNA 5'-end processing
biological_process	GO:0006139	nucleobase-containing compound metabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004534	5'-3' exoribonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0003676	nucleic acid binding