Csor.00g286590 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g286590
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	CASP-like protein
Location	Csor_Chr10: 169179 .. 171607 (-)
RNA-Seq Expression	Csor.00g286590
Synteny	Csor.00g286590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATAATAATGTCGAATTGGAAGCCAAGTCCCAGGGCCCCCATGCCAACCTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACGCTGGCCGCCATCTGGACCCTCGTCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAGTAACTCCCTACTCCCTACTCCCTACTCTTTTTTGTTTTCCATATAGTTGATCCAAAATTAATTTTATGGCGCAGATTCTTTGCCATAGCCAACGCTATTGCCTGTGGCTTCTGTCTTCTGTCCGTGTGCTTTGTTTTCATATCAACTCGGCAGTTGGCGTTGGGGAGCCGTCAAAGAAACTTCTTCTTCTTTTTTCACGATTTGTTGATGATGGGATTGGTGCTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGGTACGGGAACACCCACACAGGGTGGACGCCCATCTGTGAACAATTCGCCAAGTTTTGTAATCGCATCGCCATTTCCATCGCCATCTCTTATTTTGCCGTGCTTTGCCTCCTCATACTCACCATCATCTCTGCGAACCCAACCAAACTCCACCGCTAATTTGGCCCATTTTGTTGATGTGTGAACCCGAGGTTTGGTTAATGGGTTTAGTGATCTTCTTCTGTGTTTTCTCATTCTCATAAATTTGCTTTCTACCTTTCTTCCTTTTACTAATTAATTGCATAATATAACATACTTTCTATCTTCAATTCACTTCAACGTGGTTTCTTTTTTTAATACTATTTTCAGAGTGCCCCCCTTTTTTTTTTCCAGACCAAACCAACCACATAATATATATATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATGGGCGCAAGCAACCAGGTAGCAGTCAAATCTTTTTCTTTCAAAATTTATGTAAAACATCTGCACGTGTCATATGAATGGAGGTGAGTTTTCCGACAAATATAGTTTTTATTACTTCAGCAATAAAAAATAAAAATACATTTTAATAACGTTTTTGTTGATTCACCAATTATAAGAATACCATTAACTTTTTCGAGTATGCTAGTTTATTCAATTTGAAATAATTGAGGTATTATAGATTGATGATGATATACTAATAAAATAATATTTCCCAAGTAGAATAATAATTCAAATTAATATATTATCAGTGTATATGAAATATAAATGTATAAAATATATGGAGAGATGGATGAAAGTAGAATTTGAATGGCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGACTAGATTTGCAAATATAATGTTGATCTTTTTTTTTAATCATATTTCAAAAACCACATAAATTCTACATAAATTCTAGAAGTAAAAAATGGTATTAATGGTTAAGCCACCATAAAAAATCTTATTGAATTTATTTTTAGGTCCACTATATATATATATACACGACCTCTCAGTAATGGTGAAAAATTAATTGTGTTTATGGCATGCCTAATTTCCAATTGCACTTCTAATAATTATACATTAAAAAACTTAATTTATGATGTAAATACCAAATAAAACTTTTGTATTTTGTTTTTACTCATTATATTTTTTTATAAATTTTAAATAAATTCCTTCAAAATTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATACTACTTTCATTAAGATAATGGTCATTAGACACGGAGTATTTGAGGGTTTATAAAAGAAATGTTAATTTTAAACACAAAACAGTTTTAATTAATTTTACAATTTATTGAAATTACATGCACTAAATTAACCATATGAAGACATTTTAATTTAAATTTTAAATAAATCTATTCATAGGTGTTGACGACAAATGAAACGAAAACCATTCTTTTTACAATCATACCCTTATACTCCTTTTATTTTTCGCTGTTTCGCTCCATTTCTCCTTTTTTTTCCATCTTTGTCGCTGCCGCGTACAGCCACCAAACCACCGGCAGATTTCTTTCTTCTCCCTCGTCCCCTGCAGCGAGCCACACATCGCCACGCCTTCGCCTTTTGCCCCACACCGTCACCCCCATTGCCACGCCCATTTGATTTCTCTCTACACCTTCACGCCTTCACGCCAACCTGCATTTTGCCGCTGCGCCTCCATCTTCAAGTCTGCCGGAATCGAAGCATTTTTCTTCTTGTTCTTCATTTCAACGAGCCATCTTCAAAGTAGGACCACCTTAGAGTTAGGATAATTTTAATTTAAAATCTTGCCGAATCCGACCTATTTTGGATTCATTTCTTTTTCTTACATCAAAACAAGATTTCAAATTCTTTCTTTTTTTTCTTTCTTTTTTTCGAGTTTTCGTTCCAAACCCCAGAATTTTTTCTAATCTGTAATCGTTTCAAATACAGGGTTCCAAACTGAGGCTTAG

mRNA sequence

ATGGCCGATAATAATGTCGAATTGGAAGCCAAGTCCCAGGGCCCCCATGCCAACCTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACGCTGGCCGCCATCTGGACCCTCGTCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAATTCTTTGCCATAGCCAACGCTATTGCCTGTGGCTTCTGTCTTCTGTCCGTGTGCTTTGTTTTCATATCAACTCGGCAGTTGGCGTTGGGGAGCCGTCAAAGAAACTTCTTCTTCTTTTTTCACGATTTGTTGATGATGGGATTGGTGCTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGCGAGCCACACATCGCCACGCCTTCGCCTTTTGCCCCACACCGTCACCCCCATTGCCACGCCCATTTGATTTCTCTCTACACCTTCACGCCTTCACGCCAACCTGCATTTTGCCGCTGCGCCTCCATCTTCAAGTCTGCCGGAATCGAAGCATTTTTCTTCTTGTTCTTCATTTCAACGAGCCATCTTCAAAGGTTCCAAACTGAGGCTTAG

Coding sequence (CDS)

ATGGCCGATAATAATGTCGAATTGGAAGCCAAGTCCCAGGGCCCCCATGCCAACCTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACGCTGGCCGCCATCTGGACCCTCGTCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAATTCTTTGCCATAGCCAACGCTATTGCCTGTGGCTTCTGTCTTCTGTCCGTGTGCTTTGTTTTCATATCAACTCGGCAGTTGGCGTTGGGGAGCCGTCAAAGAAACTTCTTCTTCTTTTTTCACGATTTGTTGATGATGGGATTGGTGCTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGCGAGCCACACATCGCCACGCCTTCGCCTTTTGCCCCACACCGTCACCCCCATTGCCACGCCCATTTGATTTCTCTCTACACCTTCACGCCTTCACGCCAACCTGCATTTTGCCGCTGCGCCTCCATCTTCAAGTCTGCCGGAATCGAAGCATTTTTCTTCTTGTTCTTCATTTCAACGAGCCATCTTCAAAGGTTCCAAACTGAGGCTTAG

Protein sequence

MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGCAAATAIGFVGSEPHIATPSPFAPHRHPHCHAHLISLYTFTPSRQPAFCRCASIFKSAGIEAFFFLFFISTSHLQRFQTEA

Homology

[Close]

BLAST of Csor.00g286590 vs. ExPASy Swiss-Prot
Match: A7PHN8 (CASP-like protein 1F1 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g00560 PE=2 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 2.8e-23
Identity = 67/129 (51.94%), Postives = 87/129 (67.44%), Query Frame = 0


Query: 8   LEAKSQ-----GPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSY 67
           +EAK Q     G H  L+L + I LR L +++TL A W ++T+KQ+V ++G  ++A+YSY
Sbjct: 29  IEAKFQQNPPLGTH-KLFLGAHICLRILTVTATLTAAWMMITSKQTVEVYGIQVEAKYSY 88

Query: 68  SSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFF-FFHDLLMMGLVLSGCA 127
           SSAFKFF+ ANAIACG    SV  +F +      GS    FFF F HDL MM LVL+GCA
Sbjct: 89  SSAFKFFSYANAIACG---CSVLTLFPAFSLFYRGSTPMKFFFLFLHDLCMMSLVLAGCA 148

Query: 128 AATAIGFVG 131
           AATAIG+VG
Sbjct: 149 AATAIGYVG 153

[Close]

BLAST of Csor.00g286590 vs. ExPASy Swiss-Prot
Match: B9RA90 (CASP-like protein 1F1 OS=Ricinus communis OX=3988 GN=RCOM_1504680 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-21
Identity = 63/130 (48.46%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 5   NVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSYSS 64
           NVE +  S      L++ +QI LR + I +TLAA W +VT KQS+    F + A+Y+YSS
Sbjct: 3   NVEDKYNSPLKSQKLFIGAQICLRIVTIGATLAATWIMVTDKQSITFGDFVMVAKYNYSS 62

Query: 65  AFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRN----FFFFFHDLLMMGLVLSGC 124
           AFKFF +AN IAC   ++S+ F+       ALG    N    F  F HDLLMM LVL+GC
Sbjct: 63  AFKFFVLANVIACACSVVSLLFL------CALGRYSSNPGHVFLLFLHDLLMMSLVLAGC 122

Query: 125 AAATAIGFVG 131
           +AATAIGF+G
Sbjct: 123 SAATAIGFLG 126

[Close]

BLAST of Csor.00g286590 vs. ExPASy Swiss-Prot
Match: B9RH17 (CASP-like protein 1F2 OS=Ricinus communis OX=3988 GN=RCOM_1446020 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.9e-20
Identity = 51/112 (45.54%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 19  LYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSYSSAFKFFAIANAIACG 78
           ++  +Q+I R L I+  +A+I  +VT+ Q+V++FG    ARYSYSSAF+F   ANA+ CG
Sbjct: 30  IFFMAQVIFRILAIAFAVASISAMVTSDQNVIVFGMDTAARYSYSSAFRFLVGANAVVCG 89

Query: 79  FCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGCAAATAIGFVG 131
           F +LS+ FV + +R+ +    ++N++ F HD++MM +++SGC+AATAIG+VG
Sbjct: 90  FSVLSLIFVCLMSRR-SEAILEKNYYLFLHDMVMMVMMVSGCSAATAIGYVG 140

[Close]

BLAST of Csor.00g286590 vs. ExPASy Swiss-Prot
Match: B9IFI5 (CASP-like protein 1F1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_824792 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.5e-19
Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           M +N  +           L++  QI  R + I++++A+ W ++T+KQ + I G  LDARY
Sbjct: 1   MPNNEAKFSVNQPLKTQKLFIGVQIFFRIVAIAASVASSWLMITSKQVIDIGGIVLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFF-FFHDLLMMGLVLSG 120
           SYS  FKF A  N +   F LLS+ F+ +  RQ   GS   ++FF F HDL MM LV+ G
Sbjct: 61  SYSPEFKFLAFTNIVVGCFSLLSLLFLVLVVRQ---GSNPNHYFFLFLHDLAMMSLVVGG 120

Query: 121 CAAATAIGFVG 131
           CAAAT +GF+G
Sbjct: 121 CAAATTVGFLG 128

[Close]

BLAST of Csor.00g286590 vs. ExPASy Swiss-Prot
Match: A7PA04 (CASP-like protein 1F2 OS=Vitis vinifera OX=29760 GN=VIT_14s0068g01400 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.7e-18
Identity = 51/111 (45.95%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 20  YLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSYSSAFKFFAIANAIACGF 79
           +  +Q++LR   ++ T AAI  +VTAK++V +F  +   RYSY SAFKF   A+A+ CGF
Sbjct: 28  FFIAQVVLRFFTLAFTGAAIAVMVTAKETVEVFSISFTVRYSYLSAFKFLVGADAVVCGF 87

Query: 80  CLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGCAAATAIGFVG 131
            +LS+ FV I  +    G     FF +FHDL++M L +S CAAATA+G+VG
Sbjct: 88  SMLSLIFVSIFNK----GKSNHYFFLYFHDLILMVLSMSACAAATAVGYVG 134

[Close]

BLAST of Csor.00g286590 vs. NCBI nr
Match: KAG6589353.1 (CASP-like protein 1F1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392 bits (1006), Expect = 2.93e-137
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY
Sbjct: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGC 120
           SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGC
Sbjct: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGC 120

Query: 121 AAATAIGFVGSEPHIATPSPFAPHRHPHCHAHLISLYTFTPSRQPAFCRCASIFKSAGIE 180
           AAATAIGFVGSEPHIATPSPFAPHRHPHCHAHLISLYTFTPSRQPAFCRCASIFKSAGIE
Sbjct: 121 AAATAIGFVGSEPHIATPSPFAPHRHPHCHAHLISLYTFTPSRQPAFCRCASIFKSAGIE 180

Query: 181 AFFFLFFISTSHLQRFQTEA 200
           AFFFLFFISTSHLQRFQTEA
Sbjct: 181 AFFFLFFISTSHLQRFQTEA 200

[Close]

BLAST of Csor.00g286590 vs. NCBI nr
Match: XP_022921629.1 (CASP-like protein 1F1 [Cucurbita moschata])

HSP 1 Score: 243 bits (620), Expect = 9.91e-79
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY
Sbjct: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGC 120
           SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALG+RQRNFFFF HDLLMMGLVLSGC
Sbjct: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120

Query: 121 AAATAIGFVG 130
           AAATAIGFVG
Sbjct: 121 AAATAIGFVG 130

[Close]

BLAST of Csor.00g286590 vs. NCBI nr
Match: XP_022987446.1 (CASP-like protein 1F1 [Cucurbita maxima])

HSP 1 Score: 231 bits (589), Expect = 5.13e-74
Identity = 122/130 (93.85%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           M DNNVELEAKSQG HA LYLSSQIILRA VISSTLAA WTL+TAKQSVVIFGFTLDARY
Sbjct: 1   MPDNNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGC 120
           SYSSAFKFFAIANA+ACGFCLLSVCFVFISTRQLALGSRQRNFFFF HDLLMMGLVLSGC
Sbjct: 61  SYSSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGC 120

Query: 121 AAATAIGFVG 130
           AAATAIGFVG
Sbjct: 121 AAATAIGFVG 130

[Close]

BLAST of Csor.00g286590 vs. NCBI nr
Match: XP_023516133.1 (CASP-like protein 1F1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224 bits (572), Expect = 2.32e-71
Identity = 122/135 (90.37%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MADNN-VELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDAR 60
           MADNN VELEAKSQGPHANLYLSSQIILRALVISSTLAA WTL TAKQSVVIFGFTLDAR
Sbjct: 1   MADNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDAR 60

Query: 61  YSYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNF----FFFFHDLLMMGL 120
           YSYSSAFKFFA+ANAIACGFCLLS+CFVFIS+RQLALG+RQRNF    FFF HDLLMMGL
Sbjct: 61  YSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGL 120

Query: 121 VLSGCAAATAIGFVG 130
           V+SGCAAATAIGFVG
Sbjct: 121 VVSGCAAATAIGFVG 135

[Close]

BLAST of Csor.00g286590 vs. NCBI nr
Match: XP_022134667.1 (CASP-like protein 1F2 [Momordica charantia] >XP_022134668.1 CASP-like protein 1F2 [Momordica charantia])

HSP 1 Score: 147 bits (372), Expect = 3.93e-41
Identity = 85/145 (58.62%), Postives = 102/145 (70.34%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MAD  +ELE+       NL+L SQ ILR LVI+STLAA W ++TAKQSV++FG  LDARY
Sbjct: 1   MAD--IELESNKSNTSHNLHLCSQTILRGLVIASTLAAAWLMLTAKQSVIVFGIPLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGC 120
           SYS AFKFFA+ANAIACGFC LSV  +F+ + +L     Q N+  F HDLLMM LV SGC
Sbjct: 61  SYSPAFKFFALANAIACGFCFLSVLLLFVLSHRL---HNQPNYILFLHDLLMMVLVASGC 120

Query: 121 AAATAIGFVGSEPHIATP-SPFAPH 144
           AA+TAIG+VG   +  T  SP   H
Sbjct: 121 AASTAIGYVGKYGNSHTGWSPICDH 140

[Close]

BLAST of Csor.00g286590 vs. ExPASy TrEMBL
Match: A0A6J1E119 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429832 PE=3 SV=1)

HSP 1 Score: 243 bits (620), Expect = 4.80e-79
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY
Sbjct: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGC 120
           SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALG+RQRNFFFF HDLLMMGLVLSGC
Sbjct: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNFFFFVHDLLMMGLVLSGC 120

Query: 121 AAATAIGFVG 130
           AAATAIGFVG
Sbjct: 121 AAATAIGFVG 130

[Close]

BLAST of Csor.00g286590 vs. ExPASy TrEMBL
Match: A0A6J1JE80 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484991 PE=3 SV=1)

HSP 1 Score: 231 bits (589), Expect = 2.48e-74
Identity = 122/130 (93.85%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           M DNNVELEAKSQG HA LYLSSQIILRA VISSTLAA WTL+TAKQSVVIFGFTLDARY
Sbjct: 1   MPDNNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGC 120
           SYSSAFKFFAIANA+ACGFCLLSVCFVFISTRQLALGSRQRNFFFF HDLLMMGLVLSGC
Sbjct: 61  SYSSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGC 120

Query: 121 AAATAIGFVG 130
           AAATAIGFVG
Sbjct: 121 AAATAIGFVG 130

[Close]

BLAST of Csor.00g286590 vs. ExPASy TrEMBL
Match: A0A6J1C084 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006880 PE=3 SV=1)

HSP 1 Score: 147 bits (372), Expect = 1.90e-41
Identity = 85/145 (58.62%), Postives = 102/145 (70.34%), Query Frame = 0


Query: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60
           MAD  +ELE+       NL+L SQ ILR LVI+STLAA W ++TAKQSV++FG  LDARY
Sbjct: 1   MAD--IELESNKSNTSHNLHLCSQTILRGLVIASTLAAAWLMLTAKQSVIVFGIPLDARY 60

Query: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGC 120
           SYS AFKFFA+ANAIACGFC LSV  +F+ + +L     Q N+  F HDLLMM LV SGC
Sbjct: 61  SYSPAFKFFALANAIACGFCFLSVLLLFVLSHRL---HNQPNYILFLHDLLMMVLVASGC 120

Query: 121 AAATAIGFVGSEPHIATP-SPFAPH 144
           AA+TAIG+VG   +  T  SP   H
Sbjct: 121 AASTAIGYVGKYGNSHTGWSPICDH 140

[Close]

BLAST of Csor.00g286590 vs. ExPASy TrEMBL
Match: A0A5A7UPF9 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00240 PE=3 SV=1)

HSP 1 Score: 144 bits (364), Expect = 4.24e-40
Identity = 88/139 (63.31%), Postives = 104/139 (74.82%), Query Frame = 0


Query: 4   NNVELEAKSQGPH-------ANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTL 63
           N++ELE+KS   H        NL+L SQIILR LVISSTLAA W ++TAKQSV++FG   
Sbjct: 7   NDMELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPF 66

Query: 64  DARYSYSSAFKFFAIANAIACGFCLLSVCF-VFISTRQLALGSRQRNFF--FFF--HDLL 123
           DARY+YSSAF+FFA ANAIA  FC LS+CF +F STR  +  S   NF+  FFF  HDLL
Sbjct: 67  DARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSS--STPPNFYILFFFRLHDLL 126

Query: 124 MMGLVLSGCAAATAIGFVG 130
           MMGLVLSGC+AATAIG+VG
Sbjct: 127 MMGLVLSGCSAATAIGYVG 143

[Close]

BLAST of Csor.00g286590 vs. ExPASy TrEMBL
Match: A0A5D3BHA2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00240 PE=3 SV=1)

HSP 1 Score: 143 bits (361), Expect = 1.17e-39
Identity = 88/138 (63.77%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 4   NNVELEAKS------QGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLD 63
           N++ELE+KS      Q    NL+L SQIILR LVISSTLAA W ++TAKQSV++FG   D
Sbjct: 7   NDMELESKSCSHRHDQPTITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFD 66

Query: 64  ARYSYSSAFKFFAIANAIACGFCLLSVCF-VFISTRQLALGSRQRNFF--FFF--HDLLM 123
           ARY+YSSAF+FFA ANAIA  FC LS+CF +F STR  +  S   NF+  FFF  HDLLM
Sbjct: 67  ARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSS--STPPNFYILFFFRLHDLLM 126

Query: 124 MGLVLSGCAAATAIGFVG 130
           MGLVLSGC+AATAIG+VG
Sbjct: 127 MGLVLSGCSAATAIGYVG 142

[Close]

BLAST of Csor.00g286590 vs. TAIR 10
Match: AT4G25040.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 58.9 bits (141), Expect = 5.3e-09
Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 0


Query: 19  LYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARYSYSSAFKFFAIANAIACG 78
           L L  Q+ +R L I + +A++W ++T ++   ++G   +A+YSYSSAF++   A    C 
Sbjct: 13  LNLGVQVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCA 72

Query: 79  FCLLSVCFVFISTRQLALGSRQRNFFFFFHDLLMMGLVLSGCAAATAIGFVGSEPH-IAT 138
             L ++ +  ++ R+  L      F  FF DLL     +S  +AA A G+VG   +  A 
Sbjct: 73  ATLFTLVWACLAVRRRGL-----VFALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQAG 132

Query: 139 PSPFAPHRHPHCHAHLISL 157
             P   + H +C    ISL
Sbjct: 133 WLPICGYVHGYCSRVTISL 146

[Close]

BLAST of Csor.00g286590 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 46.2 bits (108), Expect = 3.6e-05
Identity = 39/119 (32.77%), Postives = 58/119 (48.74%), Query Frame = 0


Query: 24  QIILRALVISSTLAAIWTLVTAKQSVVI----------FGFTLDARYSYSSAFKFFAIAN 83
           ++ +R L +  T+ A   L  AKQ+ V+             +  A+ SY SAF +   AN
Sbjct: 28  ELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISAN 87

Query: 84  AIACGFCLLSVCFVFISTRQLALGSRQRNFFF--FFHDLLMMGLVLSGCAAATAIGFVG 131
           AIACG+  +S+  V IS      G R ++        DL+M+ L+ S   AA AIG +G
Sbjct: 88  AIACGYTAISIVIVMISK-----GKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMG 141

The following BLAST results are available for this feature:

BLAST of Csor.00g286590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7PHN8	2.8e-23	51.94	CASP-like protein 1F1 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g00560 PE=2 SV=2	[more]
B9RA90	2.6e-21	48.46	CASP-like protein 1F1 OS=Ricinus communis OX=3988 GN=RCOM_1504680 PE=2 SV=1	[more]
B9RH17	2.9e-20	45.54	CASP-like protein 1F2 OS=Ricinus communis OX=3988 GN=RCOM_1446020 PE=2 SV=1	[more]
B9IFI5	5.5e-19	41.98	CASP-like protein 1F1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_824792 PE=2 S...	[more]
A7PA04	4.7e-18	45.95	CASP-like protein 1F2 OS=Vitis vinifera OX=29760 GN=VIT_14s0068g01400 PE=2 SV=1	[more]

BLAST of Csor.00g286590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589353.1	2.93e-137	100.00	CASP-like protein 1F1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022921629.1	9.91e-79	98.46	CASP-like protein 1F1 [Cucurbita moschata]	[more]
XP_022987446.1	5.13e-74	93.85	CASP-like protein 1F1 [Cucurbita maxima]	[more]
XP_023516133.1	2.32e-71	90.37	CASP-like protein 1F1 [Cucurbita pepo subsp. pepo]	[more]
XP_022134667.1	3.93e-41	58.62	CASP-like protein 1F2 [Momordica charantia] >XP_022134668.1 CASP-like protein 1F...	[more]

BLAST of Csor.00g286590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E119	4.80e-79	98.46	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429832 PE=3 SV=1	[more]
A0A6J1JE80	2.48e-74	93.85	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484991 PE=3 SV=1	[more]
A0A6J1C084	1.90e-41	58.62	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006880 PE=3 SV=1	[more]
A0A5A7UPF9	4.24e-40	63.31	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00...	[more]
A0A5D3BHA2	1.17e-39	63.77	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00...	[more]

BLAST of Csor.00g286590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25040.1	5.3e-09	30.94	Uncharacterised protein family (UPF0497)	[more]
AT4G15630.1	3.6e-05	32.77	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 25..131 e-value: 1.8E-22 score: 77.8
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 23..131 e-value: 2.3E-23 score: 82.6
None	No IPR available	PANTHER	PTHR11615:SF264	CASP-LIKE PROTEIN 1F1	coord: 16..131
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 16..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g286590.m01	Csor.00g286590.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding