Csor.00g285780 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g285780
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	short-chain dehydrogenase TIC 32, chloroplastic
Location	Csor_Chr10: 512195 .. 515113 (+)
RNA-Seq Expression	Csor.00g285780
Synteny	Csor.00g285780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGATACTCTAAGATACTTGGCAGGAATCGCCGGCCCCAGCGGCTATGGCTCCAAATCCACCGCTGAACAAGTCACTCAATGTTCCTCTTTCTCTTCCACTTCTCAACTCACTGCCATTATCACCGGTAATTCTCATCAATTTCAATCATAATCTCTCTAATTATATATATATATATATATATGTTTCCATGAAAGGCTAACGTTTGAACTCCGATAATTTCATCTAATTCTTGAAGTTTGGAGCCCAAAATTAATAGATTATATTGGGATTAATTCGTGTATGGGATAGCTGTTGGATGATAAAAGTCCCACGTCTGCTAATTTAAAGAATAATCATAAGTTTATAAACAAAGAATACTCTCTCTATTGTTTGTTTTGGGATTGTATTTTGGAACACACATGAAAAGAATATTCAAATTATAAATGAAAATATTTTGATTTTGATTTTGAAAAGGAGCAACTTCAGGAATTGGGGCGGAAACAGCGAGAGTATTGGCAAAGAGAGGAGTGAGAATAGTGATGCCTGCAAGAGACATGAAAAAGGCAGCCCAAGTGAAAGAAGCAATTCAAAGGGAGAGCCCTGAGGCTGAGATTATTGTGTGCGAGATTGATCTCAGCTCCTTGGCTTCTGTCCAAAGCTTCTGTAATCACTTTCTTGCTCTTCGTCTCCCACTCAACATTCTCATGTAATTATTCTCTCTCCATTTTTTCATCTCTTTATAAATATATATATTTTCAATTTTTTTTTTTTAAAAAAAGAAAATTAATTTTTATATGCAGAAATAATGCAGGAGTCTTCTCTAAGAATTTGGAGTTCTCTGAAGACAAAGTTGAGTTGACATTTGCTACAAATTATTTGGGTATTCTACTAAGTCTTCATCTATGTTTATATGTATATTTTTTCTTTTAACATAATCTAAAATATTATTTTTTGTGTGAATATGAACATAGTCTAATTAATTTAGATATATATCAAGATTAATTAGAATTAGTTAATCATCTCAGTTAATTGTGATGAATTAGGGTTAATTAAGTCCATTGAAATTATATATATATATATATATATATATATATTTTTTTCGCCGGAGGAGGGGAGAAAAAAGGAAGAAGACAAACCGACCAGGTGTAAAACTGAATATTTAGGAGGGCAACAATGTATGGTGGCGTATCTGGCGGTGGGGCCCGACTTGAGAAAATATGCACCAAACACAAATGAGTGTAGAGACAAGTGCAACCCGGGGCCCCTCCACCTGCCCACCCGATCCACCAACCCGCTCCACCCGTCTCCCTTGGTCTCCCTGGGTTTCTGCACTTTAAATGAAATTTTAGGTTCAAATTGTAATTTAACCTATAATTTCTTTTAAACATTTTCTATTTTATCAATGAATTTTTTAAAATTTAAAGCATATTAGACTATTTTTAAAAAAATTTATAGACCAAATACACATAAATTTAAAAAAATATAATTTAACTAAATTATTTGCTGTAAAAACTTTATAATCATAAATGAGATCGACAACTTTTAACAAGCTTGGTAGATGCTTCAAACTTTTTGGAAAGCATCTTCCCCACGTGAATGTGAAATATTTATTAACGTAAAATGAAAAAAGAAATGATGGAATTCAAATTCTTGAATTTCTACTATGTTAATTTATTATTATTTAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCTTTTTTTGATGGCAGGACATTATTTTCTGACGGAGACCCTGTTAGAGAAAATGATAGAAACAGCGGCCAAGACGGGCATCGAAGGAAGGATTATCAACGTCTCTTCGGTGGTGCATGGCTGGGTGAAGAAAGACGGTTTAAACTTTGGTCAAATGCTCAACCCAAACAAGTTCGGGCCTTATTTATACTGAGAATTGTTAGGAGGGAGTCACACATAGACTAATTAAGTAGATAATGGTGGATTTATAACTAAATACATTTTCATTGATATGAGTCTTTTTTAGAAAATCAAAAGTTAAGCTATGAGTTTATGTTCAAAGTTGACAATATCATACCATTATAAAGGAATCGTAATTTTTGACGATTTACGTATCGTGTTTATTTGCAGTTACAATGGGACTCGTGCATATGCACAGTCAAAACTGGCCAATATTTTGCATGCCAAGGAAGTGTCAAGACAGCTTCAGGTAGAGGTTCTTCTAGTAGCATTGGGCATTCTTCTCTTAAATAGAAGAGCCCTCAACAATATTATTCCCAGCTACCTAGCTAACAGTTCAAATGAGAAATGGAAAAGGTTTGAATGACTCACCCGAGTTCTTTGTTTGTGGGATGGCAGGGAAGAAATGCCAGAGTGACCATAAATGCAGTACATCCAGGAATTGTAAAAACTGCTATCATAAGAGCTCACAAGGGCTTTATCACAGGTATGGACTATATTACTACCTGCAACTTCGCTGTTACTTAGTTCATATGCATATGAATCATGTCAAGTTCATCCTTCAACACGAGCAGGACAGAACCTGACTTCTCAAACTTTTCTGTGCAGATTCTTTGTTTTTTATGGCATCAAAGTTGCTAAAAACTACAAGTCAGGTGTGATTAAGCAGAAGCAATAAATAAATCTACTCCCCTCTTCCCCACAAAAAGAACAAAAAAAACACCATTCATGATTGATTTAACTCACAAAATACATAAATGGCTATGCAGGGAGCATCAACAACATGCTATGTAGCACTGAGTTCGCAAACAGAAGGAAAGAGTGGAAAATTTTATGCAGATTGTAACGAGACAAACTGCTCATCCCTGGCCAATGATGAGTTAGAAGCACAAAAGCTTTGGACTCGAACTCGCAACTTAATCAATAAACAACTAAGCAAACTTTCCACTTAA

mRNA sequence

ATGAAGGATACTCTAAGATACTTGGCAGGAATCGCCGGCCCCAGCGGCTATGGCTCCAAATCCACCGCTGAACAAGTCACTCAATGTTCCTCTTTCTCTTCCACTTCTCAACTCACTGCCATTATCACCGGAGCAACTTCAGGAATTGGGGCGGAAACAGCGAGAGTATTGGCAAAGAGAGGAGTGAGAATAGTGATGCCTGCAAGAGACATGAAAAAGGCAGCCCAAGTGAAAGAAGCAATTCAAAGGGAGAGCCCTGAGGCTGAGATTATTGTGTGCGAGATTGATCTCAGCTCCTTGGCTTCTGTCCAAAGCTTCTGTAATCACTTTCTTGCTCTTCGTCTCCCACTCAACATTCTCATAAATAATGCAGGAGTCTTCTCTAAGAATTTGGAGTTCTCTGAAGACAAAGTTGAGTTGACATTTGCTACAAATTATTTGGGACATTATTTTCTGACGGAGACCCTTTACAATGGGACTCGTGCATATGCACAGTCAAAACTGGCCAATATTTTGCATGCCAAGGAAGTGTCAAGACAGCTTCAGGGAAGAAATGCCAGAGTGACCATAAATGCAGTACATCCAGGAATTGTAAAAACTGCTATCATAAGAGCTCACAAGGGCTTTATCACAGATTCTTTGTTTTTTATGGCATCAAAGTTGCTAAAAACTACAAGTCAGGGAGCATCAACAACATGCTATGTAGCACTGAGTTCGCAAACAGAAGGAAAGAGTGGAAAATTTTATGCAGATTGTAACGAGACAAACTGCTCATCCCTGGCCAATGATGAGTTAGAAGCACAAAAGCTTTGGACTCGAACTCGCAACTTAATCAATAAACAACTAAGCAAACTTTCCACTTAA

Coding sequence (CDS)

ATGAAGGATACTCTAAGATACTTGGCAGGAATCGCCGGCCCCAGCGGCTATGGCTCCAAATCCACCGCTGAACAAGTCACTCAATGTTCCTCTTTCTCTTCCACTTCTCAACTCACTGCCATTATCACCGGAGCAACTTCAGGAATTGGGGCGGAAACAGCGAGAGTATTGGCAAAGAGAGGAGTGAGAATAGTGATGCCTGCAAGAGACATGAAAAAGGCAGCCCAAGTGAAAGAAGCAATTCAAAGGGAGAGCCCTGAGGCTGAGATTATTGTGTGCGAGATTGATCTCAGCTCCTTGGCTTCTGTCCAAAGCTTCTGTAATCACTTTCTTGCTCTTCGTCTCCCACTCAACATTCTCATAAATAATGCAGGAGTCTTCTCTAAGAATTTGGAGTTCTCTGAAGACAAAGTTGAGTTGACATTTGCTACAAATTATTTGGGACATTATTTTCTGACGGAGACCCTTTACAATGGGACTCGTGCATATGCACAGTCAAAACTGGCCAATATTTTGCATGCCAAGGAAGTGTCAAGACAGCTTCAGGGAAGAAATGCCAGAGTGACCATAAATGCAGTACATCCAGGAATTGTAAAAACTGCTATCATAAGAGCTCACAAGGGCTTTATCACAGATTCTTTGTTTTTTATGGCATCAAAGTTGCTAAAAACTACAAGTCAGGGAGCATCAACAACATGCTATGTAGCACTGAGTTCGCAAACAGAAGGAAAGAGTGGAAAATTTTATGCAGATTGTAACGAGACAAACTGCTCATCCCTGGCCAATGATGAGTTAGAAGCACAAAAGCTTTGGACTCGAACTCGCAACTTAATCAATAAACAACTAAGCAAACTTTCCACTTAA

Protein sequence

MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKRGVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTRTRNLINKQLSKLST

Homology

[Close]

BLAST of Csor.00g285780 vs. ExPASy Swiss-Prot
Match: A0A078ISJ6 (Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=TIC32B PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.4e-52
Identity = 134/315 (42.54%), Postives = 172/315 (54.60%), Query Frame = 0


Query: 8   LAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKRGVRIVMP 67
           + G AG SGYGS STAE VT          LTAIITG TSGIG E ARVL  RG  +++ 
Sbjct: 7   VTGKAGKSGYGSASTAEDVTHS---IDAKHLTAIITGGTSGIGLEAARVLGMRGAHVIIA 66

Query: 68  ARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNILINNAGVF 127
           AR+ K A   KE I +  P A I   ++DLSS+ SV+SF + FLAL +PLNILINNAGV 
Sbjct: 67  ARNTKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILINNAGVM 126

Query: 128 SKNLEFSEDKVELTFATNYLGHYFLTETL------------------------------- 187
               + SED +E  FATN++GH+ LT  L                               
Sbjct: 127 FCPFQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHTYTYTE 186

Query: 188 ------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGIVKTAIIR 247
                       Y+  +AY QSKLAN+LH+  +SR+LQ     +TIN+VHPG++ T + R
Sbjct: 187 GIMFDYINDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVHPGLITTNLFR 246

Query: 248 AHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNCSSLANDE 280
            H G     L  M+  L K   QGA+TTCYVAL    +G +GK++ DCN T  S+ A D 
Sbjct: 247 -HSGLGMAVLKAMSFFLWKNIPQGAATTCYVALHPDLKGVTGKYFTDCNVTTPSNFAIDT 306

[Close]

BLAST of Csor.00g285780 vs. ExPASy Swiss-Prot
Match: A0A078IS66 (Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=TIC32A PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-51
Identity = 133/314 (42.36%), Postives = 171/314 (54.46%), Query Frame = 0


Query: 8   LAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKRGVRIVMP 67
           + G AG SGYGS STAE VT          LTAIITG TSGIG E ARVL  RG  +++ 
Sbjct: 7   VTGKAGKSGYGSASTAEDVTHS---IDAKHLTAIITGGTSGIGLEAARVLGMRGAHVIIA 66

Query: 68  ARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNILINNAGVF 127
           +R+ K A   KE I +  P A I   ++DLSS+ SV+SF + FLAL +PLNILINNAGV 
Sbjct: 67  SRNTKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILINNAGVM 126

Query: 128 SKNLEFSEDKVELTFATNYLGHYFLTETL------------------------------- 187
               + SED +E  FATN++GH+ LT  L                               
Sbjct: 127 FCPFQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHTYTYTE 186

Query: 188 ------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGIVKTAIIR 247
                       Y+  +AY QSKLAN+LH+  +SR+LQ     +TIN+VHPG++ T + R
Sbjct: 187 GIMFDYINDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVHPGLITTNLFR 246

Query: 248 AHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNCSSLANDE 279
            H G     L  M+  L K   QGA+TTCYVAL    +  +GK++ADCN T  S+ A D 
Sbjct: 247 -HSGLGMAVLKAMSFFLWKNIPQGAATTCYVALHPDLKDVTGKYFADCNVTTPSNFAIDT 306

[Close]

BLAST of Csor.00g285780 vs. ExPASy Swiss-Prot
Match: A2RVM0 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.3e-49
Identity = 124/321 (38.63%), Postives = 180/321 (56.07%), Query Frame = 0


Query: 10  GIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKRGVRIVMPAR 69
           G  G SG+ S+STAE+VT       T  LTAI+TGA+SGIG ETARVL+ RGV +VM  R
Sbjct: 5   GSKGASGFSSRSTAEEVTH--GVDGTG-LTAIVTGASSGIGVETARVLSLRGVHVVMAVR 64

Query: 70  DMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNILINNAGVFSK 129
           +    A+VKE I ++ P A++ V E+DLSS+ SV+ F + + +  LPLN+LINNAG+ + 
Sbjct: 65  NTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMAC 124

Query: 130 NLEFSEDKVELTFATNYLGHYFLTETL--------------------------------- 189
               S+D +EL FATN+LGH+ LT+ L                                 
Sbjct: 125 PFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGV 184

Query: 190 ----------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGIVKTAIIRAH 249
                     Y+  RAY QSKL N+LHA E+++QL+     +T N++HPG + T + R  
Sbjct: 185 RFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRYF 244

Query: 250 KGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNCSSLANDELE 288
             ++  ++  +A  +LK+  QGA+TTCYVAL+ Q  G SG+++ D N      L  D   
Sbjct: 245 NPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTEL 304

[Close]

BLAST of Csor.00g285780 vs. ExPASy Swiss-Prot
Match: Q6RVV4 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.2e-48
Identity = 121/312 (38.78%), Postives = 172/312 (55.13%), Query Frame = 0


Query: 13  GPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKRGVRIVMPARDMK 72
           G SG+   STAEQVT      +T  LTAI+TGA+SGIGAET RVLA RG  ++M  R+M 
Sbjct: 9   GVSGFSGSSTAEQVTH--GIDATG-LTAIVTGASSGIGAETTRVLALRGAHVIMGVRNMV 68

Query: 73  KAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNILINNAGVFSKNLE 132
            A  VK+ I ++ P A++   E+DLSSL SV+ F + F +   PLNILINNAG+ +   +
Sbjct: 69  AAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIMACPFK 128

Query: 133 FSEDKVELTFATNYLGHYFLTETL------------------------------------ 192
            S+D +EL FATN++GH+ LT  L                                    
Sbjct: 129 LSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRFD 188

Query: 193 -------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGIVKTAIIRAHKGF 252
                  YN  RAY QSKLAN+LHA ++++ L+     +T N++HPG + T + R H   
Sbjct: 189 KINDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFR-HNSA 248

Query: 253 ITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQK 282
           +   +  +   +LK   QGA+TTCYVAL  Q +G SG++++D N    +    D   A+K
Sbjct: 249 VNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDVDLAKK 308

[Close]

BLAST of Csor.00g285780 vs. ExPASy Swiss-Prot
Match: Q9HBH5 (Retinol dehydrogenase 14 OS=Homo sapiens OX=9606 GN=RDH14 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.1e-35
Identity = 103/283 (36.40%), Postives = 147/283 (51.94%), Query Frame = 0


Query: 39  TAIITGATSGIGAETARVLAKRGVRIVMPARDMKKAAQVKEAIQRESPEA---------- 98
           T +ITGA SG+G  TA  L + G R++M  RD  +A +    ++RE  +A          
Sbjct: 45  TVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVS 104

Query: 99  ---EIIVCEIDLSSLASVQSFCNHFLALRLPLNILINNAGVFSKNLEFSEDKVELTFATN 158
              E+IV E+DL+SL SV++FC   L     L++LINNAG+F      +ED  E+ F  N
Sbjct: 105 GVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVN 164

Query: 159 YLGHYFLTETL-----------------------------------YNGTRAYAQSKLAN 218
           +LGH+ LT  L                                   YN +  Y++SKLAN
Sbjct: 165 HLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFDDLNSEQSYNKSFCYSRSKLAN 224

Query: 219 ILHAKEVSRQLQGRNARVTINAVHPGIVKTAIIR-AHKGFITDSLFFMAS-KLLKTTSQG 272
           IL  +E++R+L+G N  VT+N +HPGIV+T + R  H   +   LF + S    KT  +G
Sbjct: 225 ILFTRELARRLEGTN--VTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVSWAFFKTPVEG 284

[Close]

BLAST of Csor.00g285780 vs. NCBI nr
Match: KAG6589433.1 (Short-chain dehydrogenase TIC 32 B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 543 bits (1399), Expect = 2.88e-194
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR
Sbjct: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL
Sbjct: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLYNGTRAYAQSKLANILHAKEVSRQ 180
           INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLYNGTRAYAQSKLANILHAKEVSRQ
Sbjct: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLYNGTRAYAQSKLANILHAKEVSRQ 180

Query: 181 LQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQ 240
           LQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQ
Sbjct: 181 LQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQ 240

Query: 241 TEGKSGKFYADCNETNCSSLANDELEAQKLWTRTRNLINKQLSKLST 287
           TEGKSGKFYADCNETNCSSLANDELEAQKLWTRTRNLINKQLSKLST
Sbjct: 241 TEGKSGKFYADCNETNCSSLANDELEAQKLWTRTRNLINKQLSKLST 287

[Close]

BLAST of Csor.00g285780 vs. NCBI nr
Match: KAG7023113.1 (Short-chain dehydrogenase TIC 32, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 522 bits (1345), Expect = 3.92e-185
Identity = 287/330 (86.97%), Postives = 287/330 (86.97%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR
Sbjct: 15  MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 74

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL
Sbjct: 75  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 134

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL                        
Sbjct: 135 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETAAKTGIEGRIINVSSVV 194

Query: 181 -------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 240
                              YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI
Sbjct: 195 HGWVKKDGLSFGQMLNPNNYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 254

Query: 241 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 287
           VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC
Sbjct: 255 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 314

[Close]

BLAST of Csor.00g285780 vs. NCBI nr
Match: XP_022921530.1 (short-chain dehydrogenase TIC 32, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 522 bits (1345), Expect = 4.21e-185
Identity = 287/330 (86.97%), Postives = 287/330 (86.97%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR
Sbjct: 17  MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 76

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL
Sbjct: 77  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 136

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL                        
Sbjct: 137 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETATKTGIEGRIINISSVV 196

Query: 181 -------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 240
                              YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI
Sbjct: 197 HGWVKKDGLNFGQMLNPNNYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 256

Query: 241 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 287
           VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC
Sbjct: 257 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 316

[Close]

BLAST of Csor.00g285780 vs. NCBI nr
Match: XP_022988395.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 521 bits (1343), Expect = 8.50e-185
Identity = 286/330 (86.67%), Postives = 287/330 (86.97%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR
Sbjct: 17  MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 76

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL
Sbjct: 77  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 136

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL                        
Sbjct: 137 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETAAQTGIEGRIINVSSVV 196

Query: 181 -------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 240
                              YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI
Sbjct: 197 HGWVKKDGLSFGQMLNPNNYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 256

Query: 241 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 287
           VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC
Sbjct: 257 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 316

[Close]

BLAST of Csor.00g285780 vs. NCBI nr
Match: XP_023516084.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520 bits (1340), Expect = 2.43e-184
Identity = 286/330 (86.67%), Postives = 287/330 (86.97%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR
Sbjct: 17  MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 76

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFC+HFLALRLPLNIL
Sbjct: 77  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCSHFLALRLPLNIL 136

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL                        
Sbjct: 137 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETAAKTGIEGRIINVSSVV 196

Query: 181 -------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 240
                              YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI
Sbjct: 197 HGWVKKDGLSFGQMLNPNNYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 256

Query: 241 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 287
           VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC
Sbjct: 257 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 316

[Close]

BLAST of Csor.00g285780 vs. ExPASy TrEMBL
Match: A0A6J1E617 (short-chain dehydrogenase TIC 32, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429765 PE=3 SV=1)

HSP 1 Score: 522 bits (1345), Expect = 2.04e-185
Identity = 287/330 (86.97%), Postives = 287/330 (86.97%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR
Sbjct: 17  MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 76

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL
Sbjct: 77  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 136

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL                        
Sbjct: 137 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETATKTGIEGRIINISSVV 196

Query: 181 -------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 240
                              YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI
Sbjct: 197 HGWVKKDGLNFGQMLNPNNYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 256

Query: 241 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 287
           VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC
Sbjct: 257 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 316

[Close]

BLAST of Csor.00g285780 vs. ExPASy TrEMBL
Match: A0A6J1JJF7 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485650 PE=3 SV=1)

HSP 1 Score: 521 bits (1343), Expect = 4.11e-185
Identity = 286/330 (86.67%), Postives = 287/330 (86.97%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR
Sbjct: 17  MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 76

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL
Sbjct: 77  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 136

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL                        
Sbjct: 137 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETAAQTGIEGRIINVSSVV 196

Query: 181 -------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 240
                              YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI
Sbjct: 197 HGWVKKDGLSFGQMLNPNNYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 256

Query: 241 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 287
           VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC
Sbjct: 257 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 316

[Close]

BLAST of Csor.00g285780 vs. ExPASy TrEMBL
Match: A0A6J1E1M6 (short-chain dehydrogenase TIC 32, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429765 PE=3 SV=1)

HSP 1 Score: 510 bits (1313), Expect = 1.32e-180
Identity = 283/330 (85.76%), Postives = 283/330 (85.76%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITG    IGAETARVLAKR
Sbjct: 17  MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITG----IGAETARVLAKR 76

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL
Sbjct: 77  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 136

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL                        
Sbjct: 137 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETATKTGIEGRIINISSVV 196

Query: 181 -------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 240
                              YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI
Sbjct: 197 HGWVKKDGLNFGQMLNPNNYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 256

Query: 241 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 287
           VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC
Sbjct: 257 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 316

[Close]

BLAST of Csor.00g285780 vs. ExPASy TrEMBL
Match: A0A6J1JH35 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485650 PE=3 SV=1)

HSP 1 Score: 509 bits (1311), Expect = 2.66e-180
Identity = 282/330 (85.45%), Postives = 283/330 (85.76%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITG    IGAETARVLAKR
Sbjct: 17  MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITG----IGAETARVLAKR 76

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL
Sbjct: 77  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 136

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL                        
Sbjct: 137 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETAAQTGIEGRIINVSSVV 196

Query: 181 -------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 240
                              YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI
Sbjct: 197 HGWVKKDGLSFGQMLNPNNYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 256

Query: 241 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 287
           VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC
Sbjct: 257 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 316

[Close]

BLAST of Csor.00g285780 vs. ExPASy TrEMBL
Match: A0A5D3BHM5 (Short-chain dehydrogenase TIC 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001240 PE=3 SV=1)

HSP 1 Score: 476 bits (1225), Expect = 2.15e-167
Identity = 265/328 (80.79%), Postives = 275/328 (83.84%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MKDTLRYLAGI GPSGYGSKSTAEQV+  SS SS+SQLTAIITGATSGIGAETARVLAKR
Sbjct: 1   MKDTLRYLAGIPGPSGYGSKSTAEQVSLFSSSSSSSQLTAIITGATSGIGAETARVLAKR 60

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GV+IVM ARD+KKAAQVKEAIQ+ESPEAEIIV EIDLSSLASVQSFCN FL+L LPLNIL
Sbjct: 61  GVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFCNQFLSLGLPLNIL 120

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFSKNLEFSEDKVELTFATNYLGHY LTE L                        
Sbjct: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKTGIEGRIINVSSVV 180

Query: 181 -------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 240
                              YNGTRAYAQSKLANILHAKE+SRQLQGRNARVTINAVHPGI
Sbjct: 181 HGWVKKDGLSFRQMLNPNRYNGTRAYAQSKLANILHAKELSRQLQGRNARVTINAVHPGI 240

Query: 241 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 285
           VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC
Sbjct: 241 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 300

[Close]

BLAST of Csor.00g285780 vs. TAIR 10
Match: AT5G50130.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 375.2 bits (962), Expect = 4.8e-104
Identity = 214/326 (65.64%), Postives = 241/326 (73.93%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MK TLRYLAGIAGP+G+GS+STAEQVTQ  SF   S LTAIITG TSGIGAETARVLAKR
Sbjct: 1   MKGTLRYLAGIAGPNGFGSRSTAEQVTQ-HSFFPCSHLTAIITGGTSGIGAETARVLAKR 60

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVR+VM  RDMKKA  VKE I RE+PEA+II+ EIDLSSL+SV  FC+ FL+  LPLNIL
Sbjct: 61  GVRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNIL 120

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFS NLEFSE+K+ELTFATN+LGHY LTE L                        
Sbjct: 121 INNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVI 180

Query: 181 --------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPG 240
                               YNGTRAYAQSKLA ILHAK +S+QL+ RNA VTINAVHPG
Sbjct: 181 HNWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKALSKQLKDRNANVTINAVHPG 240

Query: 241 IVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETN 283
           IVKT IIRAHKG  TDSLF +ASKLLK+ SQGA+TTCYVALS++T+G SGK++ADCNETN
Sbjct: 241 IVKTGIIRAHKGLFTDSLFLIASKLLKSISQGAATTCYVALSNETKGLSGKYFADCNETN 300

[Close]

BLAST of Csor.00g285780 vs. TAIR 10
Match: AT5G50130.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 304.3 bits (778), Expect = 1.0e-82
Identity = 177/271 (65.31%), Postives = 195/271 (71.96%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           MK TLRYLAGIAGP+G+GS+STAEQVTQ  SF   S LTAIITG TSGIGAETARVLAKR
Sbjct: 1   MKGTLRYLAGIAGPNGFGSRSTAEQVTQ-HSFFPCSHLTAIITGGTSGIGAETARVLAKR 60

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           GVR+VM  RDMKKA  VKE I RE+PEA+II+ EIDLSSL+SV  FC+ FL+  LPLNIL
Sbjct: 61  GVRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNIL 120

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAGVFS NLEFSE+K+ELTFATN+LGHY LTE L                        
Sbjct: 121 INNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVI 180

Query: 181 --------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPG 228
                               YNGTRAYAQSKLA ILHAK +S+QL+ RNA VTINAVHPG
Sbjct: 181 HNWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKALSKQLKDRNANVTINAVHPG 240

[Close]

BLAST of Csor.00g285780 vs. TAIR 10
Match: AT4G24050.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 268.9 bits (686), Expect = 4.8e-72
Identity = 160/331 (48.34%), Postives = 204/331 (61.63%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           M +T +YL G AG SG+GSKSTAE+VT+     S   +TA+ITGATSGIGAETARVLAKR
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVTENCDLRS---ITAVITGATSGIGAETARVLAKR 60

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           G R++ PAR++K A + KE I  E PE EI+V ++DLSS+ASV++F   F +L LPLN+L
Sbjct: 61  GARLIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLL 120

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLYN---------------------- 180
           INNAG  +     SED +E+TFATNYLGH+ LT  L N                      
Sbjct: 121 INNAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGI 180

Query: 181 -----------------------GTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHP 240
                                   TRAYA SKLAN+LH KE+S +LQ   A VT+N VHP
Sbjct: 181 HGWFSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHP 240

Query: 241 GIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNET 287
           G+V+T + R  +G +TD +FF+ASKL+KT  Q A+TTCYVA + +    SGK++ DCNET
Sbjct: 241 GVVRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTCYVATNPRLVNVSGKYFTDCNET 300

[Close]

BLAST of Csor.00g285780 vs. TAIR 10
Match: AT1G64590.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 4.1e-71
Identity = 158/324 (48.77%), Postives = 201/324 (62.04%), Query Frame = 0


Query: 1   MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 60
           M +T+++L G  GPSG+GS+STA+ VT C+  S    LTAIITGATSGIGAETARVLAKR
Sbjct: 1   MIETVKHLIGSGGPSGFGSRSTADHVT-CN--SDLRSLTAIITGATSGIGAETARVLAKR 60

Query: 61  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 120
           G R+V+PAR +K A + K  I  E P+AEIIV  +DLSSL SV+ F + F +L LPLNIL
Sbjct: 61  GARLVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNIL 120

Query: 121 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETL------------------------ 180
           INNAG ++     SED VE+TFATNYLGH+ LT+ L                        
Sbjct: 121 INNAGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVV 180

Query: 181 ---------------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHP 240
                                Y+ TRAYA SKLAN+LH  E+SR L   +A VT N VHP
Sbjct: 181 HSWFSGDMLQYLADISRNNRNYDATRAYALSKLANVLHTVELSRLLHKMDANVTANCVHP 240

Query: 241 GIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNET 280
           GIVKT + R  +G +TD +FF+ SKLLK+  Q A+TTCYVA S +     GK+++DCNE 
Sbjct: 241 GIVKTRLTRDREGVVTDLVFFLTSKLLKSVPQAAATTCYVATSPRLRNVCGKYFSDCNEA 300

[Close]

BLAST of Csor.00g285780 vs. TAIR 10
Match: AT5G02540.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-59
Identity = 141/320 (44.06%), Postives = 181/320 (56.56%), Query Frame = 0


Query: 8   LAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKRGVRIVMP 67
           + G  GPSG+GS STAE+VTQ       + LTAIITG T GIG ETARVL+KRG  +V+ 
Sbjct: 7   ITGRRGPSGFGSASTAEEVTQ---GIDATNLTAIITGGTGGIGMETARVLSKRGAHVVIG 66

Query: 68  ARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNILINNAGVF 127
           AR+M  A   K  I R++  A + + ++DLSS+ S+++F   F AL LPLN+LINNAGV 
Sbjct: 67  ARNMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVM 126

Query: 128 SKNLEFSEDKVELTFATNYLGHYFLTETL------------------------------- 187
               + SED +EL FATN++GH+ LT  L                               
Sbjct: 127 FCPYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQE 186

Query: 188 ------------YNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGIVKTAIIR 247
                       Y+  RAY QSKLANILHA E+SRQLQ     +T N+VHPG++ T + +
Sbjct: 187 GIQFDSINDICSYSDKRAYGQSKLANILHANELSRQLQEEGVNITANSVHPGLILTNLFQ 246

Query: 248 AHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNCSSLANDE 285
            H   +   L F +  L K   QGA+TTCYVAL    +G +GK++ADCNE   S LA DE
Sbjct: 247 -HTALLMRFLKFFSFYLWKNIPQGAATTCYVALHPSVKGVTGKYFADCNEVTPSKLARDE 306

The following BLAST results are available for this feature:

BLAST of Csor.00g285780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A078ISJ6	2.4e-52	42.54	Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
A0A078IS66	1.2e-51	42.36	Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
A2RVM0	4.3e-49	38.63	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6RVV4	6.2e-48	38.78	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3...	[more]
Q9HBH5	2.1e-35	36.40	Retinol dehydrogenase 14 OS=Homo sapiens OX=9606 GN=RDH14 PE=1 SV=1	[more]

BLAST of Csor.00g285780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589433.1	2.88e-194	100.00	Short-chain dehydrogenase TIC 32 B, chloroplastic, partial [Cucurbita argyrosper...	[more]
KAG7023113.1	3.92e-185	86.97	Short-chain dehydrogenase TIC 32, chloroplastic, partial [Cucurbita argyrosperma...	[more]
XP_022921530.1	4.21e-185	86.97	short-chain dehydrogenase TIC 32, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_022988395.1	8.50e-185	86.67	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita maxim...	[more]
XP_023516084.1	2.43e-184	86.67	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of Csor.00g285780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E617	2.04e-185	86.97	short-chain dehydrogenase TIC 32, chloroplastic isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1JJF7	4.11e-185	86.67	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 OS=Cucurbita max...	[more]
A0A6J1E1M6	1.32e-180	85.76	short-chain dehydrogenase TIC 32, chloroplastic isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1JH35	2.66e-180	85.45	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 OS=Cucurbita max...	[more]
A0A5D3BHM5	2.15e-167	80.79	Short-chain dehydrogenase TIC 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Csor.00g285780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50130.1	4.8e-104	65.64	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G50130.2	1.0e-82	65.31	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G24050.1	4.8e-72	48.34	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G64590.1	4.1e-71	48.77	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G02540.1	1.2e-59	44.06	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 115..126 score: 47.12 coord: 39..56 score: 45.52 coord: 186..203 score: 32.49
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 39..156 e-value: 1.1E-22 score: 80.5
None	No IPR available	GENE3D	3.40.50.720		coord: 25..283 e-value: 1.1E-60 score: 207.2
None	No IPR available	PANTHER	PTHR24320	RETINOL DEHYDROGENASE	coord: 157..282
None	No IPR available	PANTHER	PTHR24320:SF198	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN	coord: 4..156
None	No IPR available	PANTHER	PTHR24320	RETINOL DEHYDROGENASE	coord: 4..156
None	No IPR available	PANTHER	PTHR24320:SF198	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN	coord: 157..282
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 36..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g285780.m01	Csor.00g285780.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity