Csor.00g285460 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g285460
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	LIM domain-containing protein WLIM1-like
Location	Csor_Chr10: 699360 .. 706130 (-)
RNA-Seq Expression	Csor.00g285460
Synteny	Csor.00g285460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTTTGCTCACCAAAACCTCTCTTGCGTCTCACTTCCGATCTCAATCTCAGGTTCTTTCTCATTCAATCGCCTCTTTGTTTCTCTTTTTTAATCGTTTTTTCGTTCTCTCGCTCAATCTTTTGAGTTTTTGGTTGACGGGTAGGTGGATCCTTCGTCACCCTCGCGCCGTGGATTCCACGTCGAACCAGGGACTCGTGAAAAGGCTGTAAGCATATCTAACTTCTTGTTATTTTCTATCTTTAATTGCCAGTGTAGTGGTCTATTCCATCGTTTGGACATTTAGTTCCTTATAGCTTACCGCTGCTCCATTAAGTTAATTGATATCTCGTATGATTGTCAATCTAGTTCATTTCGCTTTATCGTTGTTCAATCTTTCGACGCCATTATAGATGAAAGCTTTTCGAATCTGTTCAGATCAAATTGCTTGAACTCCTGTATTTAGGTCTATGAAATTAGAGGGAAGGTTTCCGTGTTGTTTTCTACACTAATCTGTTGCCATGCTATGCCATGAAACCCTGGTGAAATCTGTTAAGTTCCTTATATTGGTGTATAGTGCGGGTTTGCTTTGCATGCGTGTTCTCAAACTCCGCAAGTATAGTTTCCACTCCAATATTGAACTATTTTCGAAAATATTTATTACTTACATTTCACGAAGGACTTTTCAATACTTGGCTCACCTCTTGCATTTTGTTGATGCAGTTTAGTTGCTAAGTATGTGATTGCAATGATTTATTGTTGAATTGAGTTTCACTATGTTGAAATCTGGCAGTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCGCTCGAATCAAAAAAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGTATTAGTCTTTTTTTCATTAATAAAATACTTTTCTCTTTGTCCTGTGGGTCCTAGCTCTGCCATTTACCATTATAGCAACATTGATGTAAATTATGTGCGGTTGAATCTTTTTGATGATGTATGTTTCTATACCGATACAAGTTTGTCAAATTTTTACAAGCTTCTTAGAGGTGAAAATTGGCTTCATACACTTCGAATGAAAACAAGCATATGGCATATGCTTGTTTTTTTGGTTGATTCTTAGTAATACGTTAGATGAAAAGTATCTTAAACTTAGAAGGCAAAATAATGCTACTGAAATGGAAGATTGGGGTAGCGGCTGTATTGTATGGTTTGTTTTTAGTAGTCTCACCGGGTATCAATGACTGCAAAAGAAGGAACTTGAGATTCAAAAGAAGAACAACGTTGTCTTTGTTCAAATAAACGCTAATGCTTAAGTTGATTGAAATTGTAGACCACCTCTGAACTCCATCATATTCCCCAACTAAACAGGCAACTCTCTGTTTCCAGAGTTCGATACAACAATATTATTAGATTAGTTTTGTTTTTGGGGGTAAAGAATTGGGCTTTCATTGATAAGAAATGGAAGAAAAAGAAAGGGAGCATTAAAAAAAACAGGCCACAAAAAAGGGAGGTGTCCCAACTAACTACAAAAAGAGCTCCAATCCAATAAAATCGAGCCAGGATCATAATTACAAAAGAGTGTTGATAGACACCCACAAAGAGGCTTAAATCGAGTTCCCTACCTCTCCTCACTGGATCTTCCAACCTCTCTAAAAATCCTATTATTTCCCTCTAGCCAAATACTCAAAACAATAGCAAAAAAGCTCTTTTGCCGCAACATAAGGCCATGCTCACGAAAGGGCGAACTCAAAAGGACTTCCTTAATCACAGAGAAACAAACTCTCCACACCGAAAGTCCTCAACCATCTAGTCTGAATAGACTGCGCAAAGTTAATAATGCTAGAGCCCTCATCCCCAAAAGAATTCATGTCTTTCGTTTATATTCAACAAGGGCTAACAATGCTTCTCTATCATTCTAAACTTCTCCCAAAATGATAATCCAAATTAGTTGAAAATGAACGTTTTACCTGTTAGTTCAGTGAAGGAGCAATCAATTTTGAGTTCTTCACATGTGCATCGGGCTATGTTAAGTGAATTGGCATGTTGCCAGGTAACGTAATTGATTTCTTTTCTTTTTATTTAAATTTCTACAATGTTACCATCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTAAGAAACAAAACATTTATTATTGAAAGGGATATAGAAAAAGATGGGAGAGATGCGATTTATCCACACACCGAGTTTCTGTCCAGCTTGGCCACTGAAAACATCTTTGAACTTTATTATTGGTTCAATTCAATGCCCTCTTACTTTAATTCAATGACCAAGAAGGACGGGCACTTGACTAGGCAGATTTGGAAGACGAGAACTCCTTGTACCCTAGTCTACTAGAACATCAACACTCAAAAAAGTATTTAAAAGGAAAACCCACTCTACGTGCTATACCCCCAAGCATGCCAAAACTAGTCTCTTCTATGAAGAGACCTTTCATAATGTTTTTAATTTTCCAGCTACTTTTCTCTAGCAGATTATTGGTTTCAGTAATGTAATATGTTCAACATAGAATGGTGCTTCCAAAAGGATCCAATTATACTTCCTGAGATTATTTTGGTTTAGTGGTTAAGTGGAAAGCAAAGATTATTGGTAATGAAGGCTTCATGAGCTATTTGTGGGTCATTGGGTTATAAAGAAATGACAGAATTTCAAACCACATTCATAGAAATTCTAGAGAAATTTGAGAGAATGTAAGGCCACAGAGCCTCCCTTTGGTCGAAGTCTTACAAATGTTTTGATAATTTATCTTCTTTCGTCAAGAGGACTCTTTTTCTTCATCTCATCATGCCTGATGGTGGGAAGAATATCTCTTTGTGTATGTTTATTAGTTCCTTTGGAATGAAATTTTTTCGTCCCGAAGAAAAGAAAAACTTTAATCCTTGTCATTATACTTTTTTTTCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCAAAGGCAGCTAGCGAAAGTACATGATGGAATTTGTATCCAGTGACTAATAAAATGTCTCACAAAGGTTTTTAATGCTTTCAGCTAAATAAAGGTTTTGAAGCACCCAGTTCTATTTCCCCCATTTCTTGTAGGTTGGTTTTAATCATCAATAATTTCTTCCTGATACTTCAATTGGCATGCGAAACCGAGAAGGAACTTCCTTATTCACTCAAATTTCTGCGTGAAATAGATGCAGTGGCGTAGGCGTTGCGAGGCTCATGGTTGAGCACAACCACTTTTTTCTAGAACCGTATACTTTGTCTCATAATCAGTGAACTTCTTGTAGATCTCAGTTAGCTCATCATAAATAGATTAACCGACGAGTTCATGGCAGAAAATTCTCCACGGAAGGGAAACATCTCGAGGTTTTGAAGCTTAACATTGCCTGCTTTTACGCTTGAAATAGAACTTACATGGTGGGGGATGGGATTTTTAATTTACCTATAAAACTTATTCTGAACTTGCTTTGTAGGTCAGTTTTTCTTTTTCATGTGGCTGAAATCGTTTGAAGAGAAGATGATGATTAACCCTGAAAATTTCGCAATCCATCTGTATTTATTTTGAAATTTATCCAAAGGTTTATTTATTTATTTTGAAATTATAGAATCTATAATATTTCATGCACAAAGTAGAGCAATGAACGTGGTAACGTAATTAATATGGATCCATAGTAACACAACACCCACATGAAGGAAACTAAAAAAATAAATTGGAAATACAAGTAAGATTGGCTGGTGTTTATTATTGACACGATTTGAAGTATAAATAATGCTTTTATTTATTTGTTGGTATCATTATTTAAACGCATGCATATACCCAGAGGATTAGGTGGTTTTCTTTTATATTTTTTTTAGTGGGGGGTTGATTTTCTTTTTTATAATATTCATTATAAAACATTTAAAGAGAAAAAGAAAGGGAATAATTCGAATTTATTGTAGCCTTATTTATATTGGTGAGGACAACAAGGATGGTGGGTGGGACAGATCAATTCAATCGCTCTTCCAAGTCGGCGCCTAAAAAGGAGAATGAGAAAAGATGTAAAGCTAAATTGAAAAGAAAAAAAAGAACCAACAAAACAATCACAGCATTGAAATTGTTCCATTTCCACTTCAAATGTTGTGTGAAGAACAAAAAACAGTATAGGATGTAATTGTAAATGATTGAATAAAGGCTCGATCGCCAAACGTTTGATTTGTAAAGCAAAATATATCCTAATGTAAAAAAAAAAAAGAAATCATTTGGGATCGAATTTTCCCCTAAAGAAAAAGAGCTCGAGAATAGATATTGAATTTGACACAATAATTAGTTCGAACACTTAGTGATACATCAAATCATGAATTCATACAAATTAAAATGTGTATAGTATTTCTTGTATATGCATTTCTTATCTGTCACACATTTGATTATGCAAAGACATTGATTTTTTTTTTTTTTTTTTTTTATTTATTTATTTATTGAAAAAGTCTTCATCTTTCATCATTACTCTGCTTGATCTAACTATATTCTATATTTCATTCTACAGATCATCTTTCAGCTTTGTAACTGAGCCGACCACTTCCCATTAAAATAAACTTGGTTCTGTTACTTCCATGGCTGTGCTGAAACATAACGTATATGGTCATAAAATTGCATTAAAACACAACATTAATCCACTTCTTGGGACATTATTTTCGCTTTATGTGATCAAATAAGGAGATGACACGTGGAAAATGAAGTAGTTAATGGGTGTCTAGATGGGGAATTATGTTGGTCAAATTTTCAAATTGCTCATTACTGGAAATTTGTCAGCTTGTTTGAATGTGTCTGAGCTGTAATCTCTGACTCTAAGAGGGAAATTTGCCGGACACTTAGACGACATAAAAAGGGCGAAGGAAAGATCTTCTGCCTCCTCTTCTTCCCTTCCCTTCCCTTCCCTTCCCTTCTTCTCAACTTGGCAGTTCAGTTTAGTTTTGTTCTGTTTCTGTTCATATTCTTCCTTGAATCCTAAAGATTTTTTGAAGATGGCGTTTTTAGGGACAACCCAAAAGTGCAAGGCCTGTGACAAAACTGTTTACTTGGTTGATCAGCTCACTGCTGATAACAAAATCTACCACAAGGCCTGTTTCAGGTGCTACCATTGCAAGAGCACTCTAAAGGTAACTCTTTTGAATCTTACACACGTATATTTCTTTCTTATATGGATCTTCCTTCAGCTGAGAGCCTTGTTGTGAATGGAATAGATGCATGCTGCTCAAGATATGCCTATTTCCAGATCCTATCCATCATATTCAGTATCTCAAACTGATATAAAATGATCGTATTTCCAATTCTATCTGCACTTTTGGCTAAAATTTTCATGTTGTAATAGTTGAATGATTCCATATCTCATAAGTATCTGATTCCACTCGAGTTTGTCTTTATCTCCAGGTTGAAACTTATTCGACAATGAATTTTGCTATCTTAGATGTTGTGTTTGTTAAGATTCTGCTTGTTACTGTACAAGGATCATAGTTTGTCTTTAAGATCATAACTTTCAACCTTTGGATCGTAGAGATATTCCTTAACCAGTAGAGCTATGTTTAGGTTAGCTTGGTTCCCATAGTTCGAACATTATCACCGGTACTGATTCTATTTTTTTATGTCACTGCAGTTGTTCAATTACTCCTCCTTTGAAGGTGTATTATATTGTAAACCCCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTGGAAAAAAGTTTTGAAGGTAATTGGTTGTTGTTGAGTCTTTTTCCGCCTTCAATGACTTCTGCTTGTTTAGTCTATTATCTTCTTCTTTCTTCTCTTTAGGTACTCCAAGAACCATTAGAACAGACAGATCTACCAATCAGGTTTTTCTTTTCTTTATTCATTTTTTGGAAGCTTATCTGCTAAAATCAATACTTATGCTCTGATTCCTGACTACTAGTTGTTGTTATTAACATTTGAAAGGTCCAATCCAACAGCAAAGTGTCGAGTTTATTTGCTGGAACTCAAGATAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTAAATGGCCATTATACAGTTTAAAAGCCTCTAGTTTTTTACTTTCTTCCTGTGGCTATTCTATGAATCATTCACTCAAGTTGTCATCACATTTACAACCCAAACATTCAAATGCTAAAAGGGTACAAAACCTTCCTAATCACCTGTTTTTCTCGAGAGAGAATCAACTATATCATGCAAAAGGAAGAGCTACAGTTCAAGAAATTTCCTTATAATACAACTCGAAATGGTATGACATTAGGAAGTTACAAACTAGGATAGTTGAATGTTGTCCTAAACTAGCTTTCTTTTCATCCCTTCGTGTTGCGTTGATTCAGACTCGAACCTAACCACCCCACTTTTGGAGATGACGGTCTCCTTGATCTAAGGCAATGGAATCTTTGAAGAACTTCTGAACCTTTTAATGGAGGATATAATGTGCTAACCAATCGAGTGATGCTCAATTTGCGCAAAAACTAGTTGGCATAATATTAAGAAAGGCTGTTTTTTTTTTTTTTTTGCTTCCACAGGTGGCAGTAGATAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGATGTGTGATTAGCCCATCAAACTACATAGCACACGAACATCGACTGTACTGTAGGCATCATCATAACCAACTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGGAGTGACTGA

mRNA sequence

ATGGCGTTTTTGCTCACCAAAACCTCTCTTGCGTCTCACTTCCGATCTCAATCTCAGGTGGATCCTTCGTCACCCTCGCGCCGTGGATTCCACGTCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCGCTCGAATCAAAAAAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCAAAGGCAGCTAGCGAAAGGACAACCCAAAAGTGCAAGGCCTGTGACAAAACTGTTTACTTGGTTGATCAGCTCACTGCTGATAACAAAATCTACCACAAGGCCTGTTTCAGGTGCTACCATTGCAAGAGCACTCTAAAGTTGTTCAATTACTCCTCCTTTGAAGGTGTATTATATTGTAAACCCCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTGGAAAAAAGTTTTGAAGGTACTCCAAGAACCATTAGAACAGACAGATCTACCAATCAGGTCCAATCCAACAGCAAAGTGTCGAGTTTATTTGCTGGAACTCAAGATAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTGGCAGTAGATAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGATGTGTGATTAGCCCATCAAACTACATAGCACACGAACATCGACTGTACTGTAGGCATCATCATAACCAACTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGGAGTGACTGA

Coding sequence (CDS)

ATGGCGTTTTTGCTCACCAAAACCTCTCTTGCGTCTCACTTCCGATCTCAATCTCAGGTGGATCCTTCGTCACCCTCGCGCCGTGGATTCCACGTCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCGCTCGAATCAAAAAAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCAAAGGCAGCTAGCGAAAGGACAACCCAAAAGTGCAAGGCCTGTGACAAAACTGTTTACTTGGTTGATCAGCTCACTGCTGATAACAAAATCTACCACAAGGCCTGTTTCAGGTGCTACCATTGCAAGAGCACTCTAAAGTTGTTCAATTACTCCTCCTTTGAAGGTGTATTATATTGTAAACCCCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTGGAAAAAAGTTTTGAAGGTACTCCAAGAACCATTAGAACAGACAGATCTACCAATCAGGTCCAATCCAACAGCAAAGTGTCGAGTTTATTTGCTGGAACTCAAGATAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTGGCAGTAGATAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGATGTGTGATTAGCCCATCAAACTACATAGCACACGAACATCGACTGTACTGTAGGCATCATCATAACCAACTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGGAGTGACTGA

Protein sequence

MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASERTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD

Homology

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BLAST of Csor.00g285460 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.2e-69
Identity = 122/180 (67.78%), Postives = 147/180 (81.67%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           TTQKC ACDKTVYLVD+LTADN++YHKACFRC+HCK TLKL NY+SFEGVLYC+PHFDQ 
Sbjct: 6   TTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQN 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRS-TNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAV 219
           FK TGSLEKSFEGTP+  + DR    +  + +KVS++F GT++KCV C KTVYPIEKV+V
Sbjct: 66  FKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIEKVSV 125

Query: 220 DSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 279
           +   YH++CF+C+HGGC ISPSNYIAHE +LYC+HHH QL K+KGN SQL+   E    D
Sbjct: 126 NGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGENAAKD 185

[Close]

BLAST of Csor.00g285460 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 9.9e-67
Identity = 114/175 (65.14%), Postives = 141/175 (80.57%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           TTQKC  C+KTVYLVD+L A+ ++YHKACFRC+HC STLKL N++SF+GV+YC+ HFDQL
Sbjct: 7   TTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHHFDQL 66

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD 219
           FK TGSLEKSF+GTP+       + + QS +++SS F GT+DKC  C K VYPIE+V VD
Sbjct: 67  FKRTGSLEKSFDGTPKFKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIERVKVD 126

Query: 220 SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 275
             +YHRACF+C HGGC ISPSNYIAHE RLYC+HHH QLFK+KGN+SQL+  E +
Sbjct: 127 GTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVEETV 181

[Close]

BLAST of Csor.00g285460 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.4e-57
Identity = 106/179 (59.22%), Postives = 139/179 (77.65%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           T QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKPHF+QL
Sbjct: 6   TQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQL 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAV 219
           FK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPIEKV V
Sbjct: 66  FKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTV 125

Query: 220 DSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGS 278
           +S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   IK S
Sbjct: 126 ESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRS 182

[Close]

BLAST of Csor.00g285460 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.2e-57
Identity = 105/177 (59.32%), Postives = 138/177 (77.97%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           T QKC+AC+KTVY V+ L+AD   YHKACF+C HCKS L+L NYSS EGV+YC+PHF+QL
Sbjct: 6   TQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPHFEQL 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAV 219
           FK +GS  K+F+ +P    TD+ T ++ ++ S+++ +F+GTQDKC TC KTVYPIEKV V
Sbjct: 66  FKESGSFSKNFQ-SPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTV 125

Query: 220 DSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIK 276
           +S+ YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   IK
Sbjct: 126 ESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 181

[Close]

BLAST of Csor.00g285460 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.6e-51
Identity = 92/169 (54.44%), Postives = 123/169 (72.78%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           T  KCKACDKTVY++D LT +   YHK+CFRC HCK TL + NYSS +GVLYCKPHF+QL
Sbjct: 6   TLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPHFEQL 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD 219
           FK +G+  K+F+        D  T   ++ SK+SS F+GTQDKC TCKKTVYP+EKV ++
Sbjct: 66  FKESGNYSKNFQAGKTEKPNDHLT---RTPSKLSSFFSGTQDKCATCKKTVYPLEKVTME 125

Query: 220 SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQL 269
            +SYH+ CFRC+H GC ++ S+Y +    LYC+ H NQLF +KG+++ +
Sbjct: 126 GESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 171

[Close]

BLAST of Csor.00g285460 vs. NCBI nr
Match: KAG6589465.1 (LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 570 bits (1469), Expect = 3.05e-205
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVAR 60
           MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVAR
Sbjct: 1   MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVAR 60

Query: 61  IKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASERTTQKCKACDKTVYLVDQLTAD 120
           IKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASERTTQKCKACDKTVYLVDQLTAD
Sbjct: 61  IKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASERTTQKCKACDKTVYLVDQLTAD 120

Query: 121 NKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRTIRTD 180
           NKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRTIRTD
Sbjct: 121 NKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRTIRTD 180

Query: 181 RSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPS 240
           RSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPS
Sbjct: 181 RSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPS 240

Query: 241 NYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 278
           NYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD
Sbjct: 241 NYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 278

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BLAST of Csor.00g285460 vs. NCBI nr
Match: PQM43126.1 (hypothetical protein Pyn_23032 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 447 bits (1149), Expect = 1.55e-156
Identity = 223/279 (79.93%), Postives = 245/279 (87.81%), Query Frame = 0


Query: 1   MAFLLTKTSLASHFRSQSQV---DPSSPSRRGFHVEPGTREKALLAEDPSLRRFRSHKKG 60
           MAFLL + S+ SHF+S SQ    D  S SRR FHVEPG REKALLAEDPSL+RF+SHKKG
Sbjct: 1   MAFLL-RNSITSHFQSHSQRAQNDSLSQSRRQFHVEPGPREKALLAEDPSLKRFKSHKKG 60

Query: 61  VARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASERTTQKCKACDKTVYLVDQL 120
           VARIK++GDVLT+VVVA CCYEIYV+A MREEAR+   AS  TTQKCKAC+KTVYLVDQL
Sbjct: 61  VARIKRLGDVLTVVVVASCCYEIYVRAVMREEARKQAGASG-TTQKCKACEKTVYLVDQL 120

Query: 121 TADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRTI 180
           TADNK+YHKACFRC+HCK TLKL NYSSFEGVLYCKPHFDQLFKMTGSL+KSFEG P+T+
Sbjct: 121 TADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGIPKTV 180

Query: 181 RTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVI 240
           R DRS  QV  NSKVSSLFAGTQDKCV CKKTVYPIEKVAVD  SYH+ CFRCSHGGCVI
Sbjct: 181 R-DRS-EQVN-NSKVSSLFAGTQDKCVACKKTVYPIEKVAVDGTSYHKPCFRCSHGGCVI 240

Query: 241 SPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKG 276
           SPSNY+AHEHRLYCRHHH+QLFK+KGNFSQL K EE++G
Sbjct: 241 SPSNYVAHEHRLYCRHHHSQLFKEKGNFSQLSKQEEVQG 274

[Close]

BLAST of Csor.00g285460 vs. NCBI nr
Match: KAF9667830.1 (hypothetical protein SADUNF_Sadunf15G0064100 [Salix dunnii])

HSP 1 Score: 447 bits (1151), Expect = 4.95e-156
Identity = 217/276 (78.62%), Postives = 244/276 (88.41%), Query Frame = 0


Query: 1   MAFLLTK--TSLASHFRSQSQV--DPSSPSRRGFHVEPGTREKALLAEDPSLRRFRSHKK 60
           MAFLL    +S++SHFRS+SQ   D  S SRRGFHVEPG REKALLA DP+L+ F+SHKK
Sbjct: 41  MAFLLKNCSSSISSHFRSKSQKTQDALSISRRGFHVEPGPREKALLAADPALKWFKSHKK 100

Query: 61  GVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASERTTQKCKACDKTVYLVDQ 120
            V R+K+ GDVLTI+VVAGCCYEIYVKA MREEAR  K A +RTTQKCKAC+KTVYLVDQ
Sbjct: 101 SVWRLKRAGDVLTILVVAGCCYEIYVKAVMREEAR--KEAKKRTTQKCKACEKTVYLVDQ 160

Query: 121 LTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRT 180
           LTAD+K+YHKACFRC+HCK TLKL NYSSFEGVLYCKPHFDQLFKMTGSL+KSFEGT +T
Sbjct: 161 LTADDKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGTRKT 220

Query: 181 IRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCV 240
           +R DRS +QV  NSKVSS+FAGTQ+KCV CKKTVYPIEKVAVD  SYHRACFRC+HGGC+
Sbjct: 221 VRGDRSADQVLGNSKVSSMFAGTQEKCVACKKTVYPIEKVAVDGTSYHRACFRCAHGGCI 280

Query: 241 ISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 272
           ISPSN++AH+HRLYCRHHHNQLFK+KGNFSQL KHE
Sbjct: 281 ISPSNFVAHDHRLYCRHHHNQLFKEKGNFSQLGKHE 314

[Close]

BLAST of Csor.00g285460 vs. NCBI nr
Match: KAG5046276.1 (hypothetical protein JHK86_015682 [Glycine max] >KAG5148775.1 hypothetical protein JHK82_015656 [Glycine max])

HSP 1 Score: 404 bits (1038), Expect = 4.09e-139
Identity = 206/300 (68.67%), Postives = 233/300 (77.67%), Query Frame = 0


Query: 1   MAFLLTKTSLASHFRSQSQVDPSSPS--RRGFHVEPGTREKALLAEDPSLRRFRSHKKGV 60
           MAFL  KTS+ASHFRS SQ      S  RR FHVEPG REKALLAED +L+ F+S+KK V
Sbjct: 1   MAFLWNKTSIASHFRSHSQKTEGLASFPRRRFHVEPGAREKALLAEDATLKPFKSYKKSV 60

Query: 61  ARIKKIGDVLTIVVVAG--------CCYEI------YVKATMREEARQ----AKAASE-- 120
            +++KIG+ LT+VVVAG         C  +      Y+   ++E   +     K   E  
Sbjct: 61  KQLRKIGNALTVVVVAGPVCDRVNSVCLALKDAVTKYMSELLQERKLRNCNVLKVLDEAN 120

Query: 121 --RTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHF 180
             RTTQKCKAC+KTVYLVDQLTADNKIYHK+CFRCYHCK TLKL NY SFEGVLYCKPHF
Sbjct: 121 IGRTTQKCKACEKTVYLVDQLTADNKIYHKSCFRCYHCKGTLKLSNYCSFEGVLYCKPHF 180

Query: 181 DQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKV 240
           DQLFK TGSL+KSFEG PRT R +RST+QVQ+NSKVS+LFAGTQ+KCV CKKTVYPIEKV
Sbjct: 181 DQLFKKTGSLDKSFEGIPRTARLERSTDQVQTNSKVSNLFAGTQEKCVACKKTVYPIEKV 240

Query: 241 AVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKG 276
           AVD  SYH+ACFRC+HGGCVISPSNY+AHEHRLYCRHHH QLFKQKGNFSQLDK E  +G
Sbjct: 241 AVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQLDKQENDEG 300

[Close]

BLAST of Csor.00g285460 vs. NCBI nr
Match: XP_022921693.1 (LIM domain-containing protein WLIM1-like [Cucurbita moschata] >XP_022988414.1 LIM domain-containing protein WLIM1-like [Cucurbita maxima] >XP_023516337.1 LIM domain-containing protein WLIM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377 bits (969), Expect = 1.60e-130
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL
Sbjct: 6   TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD 219
           FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD
Sbjct: 66  FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD 125

Query: 220 SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 278
           SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD
Sbjct: 126 SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 184

[Close]

BLAST of Csor.00g285460 vs. ExPASy TrEMBL
Match: A0A314V1K9 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_23032 PE=4 SV=1)

HSP 1 Score: 447 bits (1149), Expect = 7.49e-157
Identity = 223/279 (79.93%), Postives = 245/279 (87.81%), Query Frame = 0


Query: 1   MAFLLTKTSLASHFRSQSQV---DPSSPSRRGFHVEPGTREKALLAEDPSLRRFRSHKKG 60
           MAFLL + S+ SHF+S SQ    D  S SRR FHVEPG REKALLAEDPSL+RF+SHKKG
Sbjct: 1   MAFLL-RNSITSHFQSHSQRAQNDSLSQSRRQFHVEPGPREKALLAEDPSLKRFKSHKKG 60

Query: 61  VARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASERTTQKCKACDKTVYLVDQL 120
           VARIK++GDVLT+VVVA CCYEIYV+A MREEAR+   AS  TTQKCKAC+KTVYLVDQL
Sbjct: 61  VARIKRLGDVLTVVVVASCCYEIYVRAVMREEARKQAGASG-TTQKCKACEKTVYLVDQL 120

Query: 121 TADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRTI 180
           TADNK+YHKACFRC+HCK TLKL NYSSFEGVLYCKPHFDQLFKMTGSL+KSFEG P+T+
Sbjct: 121 TADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGIPKTV 180

Query: 181 RTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVI 240
           R DRS  QV  NSKVSSLFAGTQDKCV CKKTVYPIEKVAVD  SYH+ CFRCSHGGCVI
Sbjct: 181 R-DRS-EQVN-NSKVSSLFAGTQDKCVACKKTVYPIEKVAVDGTSYHKPCFRCSHGGCVI 240

Query: 241 SPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKG 276
           SPSNY+AHEHRLYCRHHH+QLFK+KGNFSQL K EE++G
Sbjct: 241 SPSNYVAHEHRLYCRHHHSQLFKEKGNFSQLSKQEEVQG 274

[Close]

BLAST of Csor.00g285460 vs. ExPASy TrEMBL
Match: A0A6J1JLG7 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111485663 PE=4 SV=1)

HSP 1 Score: 377 bits (969), Expect = 7.73e-131
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL
Sbjct: 6   TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD 219
           FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD
Sbjct: 66  FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD 125

Query: 220 SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 278
           SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD
Sbjct: 126 SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 184

[Close]

BLAST of Csor.00g285460 vs. ExPASy TrEMBL
Match: A0A6J1E4K3 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111429864 PE=4 SV=1)

HSP 1 Score: 377 bits (969), Expect = 7.73e-131
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL
Sbjct: 6   TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD 219
           FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD
Sbjct: 66  FKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVD 125

Query: 220 SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 278
           SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD
Sbjct: 126 SKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 184

[Close]

BLAST of Csor.00g285460 vs. ExPASy TrEMBL
Match: A0A0A0LNY7 (Pollen-specific protein SF3 OS=Cucumis sativus OX=3659 GN=Csa_1G005660 PE=4 SV=1)

HSP 1 Score: 370 bits (951), Expect = 4.58e-128
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 94  KAASERTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCK 153
           K A   TTQKCKACDKTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYCK
Sbjct: 2   KMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCK 61

Query: 154 PHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPI 213
           PHFDQLFKMTGSLEKSFE TPRT+RTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYPI
Sbjct: 62  PHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPI 121

Query: 214 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 273
           EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE
Sbjct: 122 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 181

Query: 274 IKGSD 278
           IKGSD
Sbjct: 182 IKGSD 186

[Close]

BLAST of Csor.00g285460 vs. ExPASy TrEMBL
Match: A0A1S3BVF2 (LIM domain-containing protein WLIM1-like OS=Cucumis melo OX=3656 GN=LOC103493931 PE=4 SV=1)

HSP 1 Score: 369 bits (948), Expect = 1.31e-127
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 94  KAASERTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCK 153
           K A   TTQKCKACDKTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYCK
Sbjct: 2   KMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCK 61

Query: 154 PHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPI 213
           PHFDQLFKMTGSLEKSFEGTPRT+RTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYPI
Sbjct: 62  PHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPI 121

Query: 214 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 273
           EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE
Sbjct: 122 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 181

Query: 274 IKGSD 278
           IK SD
Sbjct: 182 IKVSD 186

[Close]

BLAST of Csor.00g285460 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 264.6 bits (675), Expect = 8.9e-71
Identity = 122/180 (67.78%), Postives = 147/180 (81.67%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           TTQKC ACDKTVYLVD+LTADN++YHKACFRC+HCK TLKL NY+SFEGVLYC+PHFDQ 
Sbjct: 6   TTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQN 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRS-TNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAV 219
           FK TGSLEKSFEGTP+  + DR    +  + +KVS++F GT++KCV C KTVYPIEKV+V
Sbjct: 66  FKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIEKVSV 125

Query: 220 DSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 279
           +   YH++CF+C+HGGC ISPSNYIAHE +LYC+HHH QL K+KGN SQL+   E    D
Sbjct: 126 NGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGENAAKD 185

[Close]

BLAST of Csor.00g285460 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.7e-58
Identity = 106/179 (59.22%), Postives = 139/179 (77.65%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           T QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKPHF+QL
Sbjct: 6   TQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQL 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAV 219
           FK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPIEKV V
Sbjct: 66  FKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTV 125

Query: 220 DSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGS 278
           +S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   IK S
Sbjct: 126 ESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRS 182

[Close]

BLAST of Csor.00g285460 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.7e-58
Identity = 106/179 (59.22%), Postives = 139/179 (77.65%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           T QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKPHF+QL
Sbjct: 6   TQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQL 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAV 219
           FK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPIEKV V
Sbjct: 66  FKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTV 125

Query: 220 DSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGS 278
           +S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   IK S
Sbjct: 126 ESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRS 182

[Close]

BLAST of Csor.00g285460 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.7e-58
Identity = 106/179 (59.22%), Postives = 139/179 (77.65%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           T QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKPHF+QL
Sbjct: 6   TQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQL 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAV 219
           FK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPIEKV V
Sbjct: 66  FKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTV 125

Query: 220 DSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGS 278
           +S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   IK S
Sbjct: 126 ESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRS 182

[Close]

BLAST of Csor.00g285460 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.7e-58
Identity = 106/179 (59.22%), Postives = 139/179 (77.65%), Query Frame = 0


Query: 100 TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQL 159
           T QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKPHF+QL
Sbjct: 6   TQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQL 65

Query: 160 FKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAV 219
           FK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPIEKV V
Sbjct: 66  FKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTV 125

Query: 220 DSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGS 278
           +S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   IK S
Sbjct: 126 ESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRS 182

The following BLAST results are available for this feature:

BLAST of Csor.00g285460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	1.2e-69	67.78	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	9.9e-67	65.14	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
Q9M047	2.4e-57	59.22	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	3.2e-57	59.32	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
O80839	2.6e-51	54.44	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]

BLAST of Csor.00g285460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589465.1	3.05e-205	100.00	LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. soro...	[more]
PQM43126.1	1.55e-156	79.93	hypothetical protein Pyn_23032 [Prunus yedoensis var. nudiflora]	[more]
KAF9667830.1	4.95e-156	78.62	hypothetical protein SADUNF_Sadunf15G0064100 [Salix dunnii]	[more]
KAG5046276.1	4.09e-139	68.67	hypothetical protein JHK86_015682 [Glycine max] >KAG5148775.1 hypothetical prote...	[more]
XP_022921693.1	1.60e-130	100.00	LIM domain-containing protein WLIM1-like [Cucurbita moschata] >XP_022988414.1 LI...	[more]

BLAST of Csor.00g285460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A314V1K9	7.49e-157	79.93	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_230...	[more]
A0A6J1JLG7	7.73e-131	100.00	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1E4K3	7.73e-131	100.00	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LNY7	4.58e-128	94.59	Pollen-specific protein SF3 OS=Cucumis sativus OX=3659 GN=Csa_1G005660 PE=4 SV=1	[more]
A0A1S3BVF2	1.31e-127	94.59	LIM domain-containing protein WLIM1-like OS=Cucumis melo OX=3656 GN=LOC103493931...	[more]

BLAST of Csor.00g285460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	8.9e-71	67.78	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	1.7e-58	59.22	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	1.7e-58	59.22	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	1.7e-58	59.22	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.4	1.7e-58	59.22	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 83..103
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 197..267 e-value: 3.8E-18 score: 67.4 coord: 98..168 e-value: 4.8E-19 score: 70.3
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 98..275
None	No IPR available	PANTHER	PTHR24206:SF63	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 98..275
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 203..263 e-value: 1.73452E-37 score: 124.89
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 100..161 e-value: 1.46041E-38 score: 127.966
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 99..129
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 229..267
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 130..170
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 195..228
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 103..155 e-value: 1.8E-12 score: 57.4 coord: 202..254 e-value: 1.0E-11 score: 55.0
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 203..258 e-value: 6.7E-10 score: 39.1 coord: 104..158 e-value: 5.4E-10 score: 39.4
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 104..138
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 102..162 score: 13.1473
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 201..261 score: 12.0484

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g285460.m01	Csor.00g285460.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding