Csor.00g285410 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATACATAAGTTCTCTGGAAATGTTAGGATGTATGCCATTTTGGATTCAATAGCATCTGGGCCAATTGAAGCTCGTTGCAGTCCATACTCGACTGTGGTAAGTTCATCATCTACCATTATTTGATATCAACCCCAATAAGTTTTTGGTGCTCACTTTCTCTCATCCATCAGTACCTTTGCTTAGATTTCGAGTATATAATGTATAAGGATTTCTGTAATTCTTAAGAGATGAACTGAAAAGGCGATGGAAGATTAGGGTATTTAGTCTTGCTCATTCTTTAAATTTCTTGTACAAACCGTAGTAACGAAGGATTGTATCTGTCACGTATTTAAATCGTTCGATAATGCTCATTTTTCATTTGAAGGTCGGGATGGGAGTGTCCATGAAAGGAATAGAACAGAATCCTGTTGTCTACGATCTTGTGTCTGAAATGGCTTTTCAACGCAACAAAGCCGATGTCAAGGTACACATATTTTATTATGATTTATAAATATGATGACCCATTTACTTGGTTGCCAGTTGTATTCATGTTCCATCTGCGGAAAGCTGACAATTGACACCAAATAGATTAAATTAAATATAGTTTAGAGCCGAACACCCGAATGAATTGTTCTTTAGAATTGTCAAAGCATATCCCTTATATGATGCGCAAAGAATGGCCCCATTCTACCAATTGTATGCTGACTAATCTCAAATTATTACCTTACGAGTGAAATGCAAAAACTGAAATAACCATGTGATTTGACAGCTCAGATGAGGAATATGAGGTGTTCAAAACTTTCTCTAATAGAAATCTTTTAAAACATTTAAGGAAAGTCGGGAAGGAAAAACTCAAAAAAAGATAATATTTGCTAACGGTTGGCACTTTTTCCTAATAGACGTGTTTTTAAACTTTTCGGGGAAGTACAAAAGGGAAAGCCCAAAAAAGAGCGGTAGCACTTCTCCCTAGTAGATGTGTTTTTAAACCTTTAGGGGGAAGCACAAAAGGGAAAGCCCAAAGGTGGGCACCTCTCCCTTACAGAAGCGTTTTAAAACCTTGAGGAGAAGTTCGAAAGGGAAAGCTCAAAAGTGGACACCTCTCCCTTGCAGATCCGTTTTAAAACTTTGAGGGAAAGTCTTAAGAGGACACTATCGACTTGGGTATTAAGAATGAAGCTCTGATATCATGTTAAGAACGAGAAATAGAAGGAGTATTGAAAATCAAAGAAACAAGAATGGAGTTGAAGTGAGATTGAAAGTCAAAGAAATAAGAGTGGAATTGGAAGGCCAAGGAAGATTGAAGTCCCAGAAACATTAGATAAAAAATTCGATATTCATGGATTTCATTTAAATAGAATACAAACTACCAACTAAATTTTAGAAATAAGTTAAAAAATTATAATTGATTACGGTTATAGAAAATATATTCTAATTTATCGTACACATTTGGTTCAGAGTTATGATAATGATTATTGATTCAATACACTAATATTGACAATGAGGGAGATTAGAGGATCAACATAACACATGTGATTTGAATGGCTACGATCAAATCCTATAAATTATTAGAAATTTAGAAAAATAGAAAGAAGACAAAATTTAAATTTGTTAATATTGAGAAGTCAAAGCTTTCCCGGCCTTCCTTGCTTGACCAGGATATACATATTCCTTAGTTTAAAAAGCATGAAAAGAGCATACCTCTGCTTCCAAGAAATGGCCCAACTCTGATGGCGTAGGCGGTGACCGACTGTAAGGTAAGGTTGGCGGTGATTAGTTAACGACTTAATGCTTTAGAACCTTCCCGAATCTCCATTATCCTGTACCCACGTGGACCAACCCTAAAAGTAAAAACCTAGTAGATAGACAATTTGGTAGAAAGCTAAAACAAAATATTTATTACCATTTTCAGAACAAACCATTCAATTTACAAAATTAATTAAAAAATTAATTTTCACATACAAAGGAAGAAAAATATAAAAGTAGTTTAGCGGGTAAGTATTTGGATATATTCCATTTCCACGGTAGGAATGCAAAATTTGTATGACTTGTAATCGCAACCCACACGGCACGCGCTTCGGCTTCGAATCGGATTCTCCGTGGCTATAAAACCCTGTTTCGTCTCATAACTTTTTCGTCGATTCATCTCGATTCTCTCTTCTCTTTGCTATCAGATTCTTCATCTTCTTTCTCCGAGATTTCTTTGTAGCAGAGATTTTCAGAGCCAGAATCACTCAATCGATCAGTCAAATCCATGGCGGGAAACGGCTCGTACGATTGGGCGGACCAGTGGGATTACAGCGACTCGAAGGACGTAGTCACGGAGAACACGAAGAAGAGCGGCGGCGGAAACACTACGACTAAGTATAAACAGAAGGTCGGCGAAGGCCTTGGGAAGACCAAAGCTGTGGCCTCCAATGGCGTTAAAAAGGTCAAAGAAGGAACCTCTCTCGGCTTCCAATGGATCAAAGATAAATATAACAAAACCGCTCATAAGAAGTAG ATGATACATAAGTTCTCTGGAAATGTTAGGATGTATGCCATTTTGGATTCAATAGCATCTGGGCCAATTGAAGCTCGTTGCAGTCCATACTCGACTGTGGTCGGGATGGGAGTGTCCATGAAAGGAATAGAACAGAATCCTGTTGTCTACGATCTTGTGTCTGAAATGGCTTTTCAACGCAACAAAGCCGATGTCAAGCAGAGATTTTCAGAGCCAGAATCACTCAATCGATCAGTCAAATCCATGGCGGGAAACGGCTCGTACGATTGGGCGGACCAGTGGGATTACAGCGACTCGAAGGACGTAGTCACGGAGAACACGAAGAAGAGCGGCGGCGGAAACACTACGACTAAGTATAAACAGAAGGTCGGCGAAGGCCTTGGGAAGACCAAAGCTGTGGCCTCCAATGGCGTTAAAAAGGTCAAAGAAGGAACCTCTCTCGGCTTCCAATGGATCAAAGATAAATATAACAAAACCGCTCATAAGAAGTAG ATGATACATAAGTTCTCTGGAAATGTTAGGATGTATGCCATTTTGGATTCAATAGCATCTGGGCCAATTGAAGCTCGTTGCAGTCCATACTCGACTGTGGTCGGGATGGGAGTGTCCATGAAAGGAATAGAACAGAATCCTGTTGTCTACGATCTTGTGTCTGAAATGGCTTTTCAACGCAACAAAGCCGATGTCAAGCAGAGATTTTCAGAGCCAGAATCACTCAATCGATCAGTCAAATCCATGGCGGGAAACGGCTCGTACGATTGGGCGGACCAGTGGGATTACAGCGACTCGAAGGACGTAGTCACGGAGAACACGAAGAAGAGCGGCGGCGGAAACACTACGACTAAGTATAAACAGAAGGTCGGCGAAGGCCTTGGGAAGACCAAAGCTGTGGCCTCCAATGGCGTTAAAAAGGTCAAAGAAGGAACCTCTCTCGGCTTCCAATGGATCAAAGATAAATATAACAAAACCGCTCATAAGAAGTAG MIHKFSGNVRMYAILDSIASGPIEARCSPYSTVVGMGVSMKGIEQNPVVYDLVSEMAFQRNKADVKQRFSEPESLNRSVKSMAGNGSYDWADQWDYSDSKDVVTENTKKSGGGNTTTKYKQKVGEGLGKTKAVASNGVKKVKEGTSLGFQWIKDKYNKTAHKK Homology
BLAST of Csor.00g285410 vs. ExPASy Swiss-Prot
Match: Q9FNA3 (Alpha-N-acetylglucosaminidase OS=Arabidopsis thaliana OX=3702 GN=NAGLU PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17 Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Csor.00g285410 vs. ExPASy Swiss-Prot
Match: P54802 (Alpha-N-acetylglucosaminidase OS=Homo sapiens OX=9606 GN=NAGLU PE=1 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07 Identity = 25/61 (40.98%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of Csor.00g285410 vs. NCBI nr
Match: KAG6589470.1 (Alpha-N-acetylglucosaminidase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 326 bits (835), Expect = 2.09e-112 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Csor.00g285410 vs. NCBI nr
Match: XP_023516550.1 (uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 187 bits (474), Expect = 5.12e-58 Identity = 98/120 (81.67%), Postives = 100/120 (83.33%), Query Frame = 0
BLAST of Csor.00g285410 vs. NCBI nr
Match: XP_022921775.1 (uncharacterized protein LOC111429929 [Cucurbita moschata]) HSP 1 Score: 166 bits (420), Expect = 2.60e-50 Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Csor.00g285410 vs. NCBI nr
Match: XP_022988421.1 (uncharacterized protein LOC111485668 [Cucurbita maxima] >XP_022988422.1 uncharacterized protein LOC111485668 [Cucurbita maxima]) HSP 1 Score: 165 bits (417), Expect = 2.48e-49 Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Csor.00g285410 vs. NCBI nr
Match: XP_038879790.1 (uncharacterized protein LOC120071534 [Benincasa hispida]) HSP 1 Score: 154 bits (390), Expect = 9.56e-46 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Csor.00g285410 vs. ExPASy TrEMBL
Match: A0A6J1E6S2 (uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC111429929 PE=4 SV=1) HSP 1 Score: 166 bits (420), Expect = 1.26e-50 Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Csor.00g285410 vs. ExPASy TrEMBL
Match: A0A6J1JCZ5 (uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668 PE=4 SV=1) HSP 1 Score: 165 bits (417), Expect = 1.20e-49 Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Csor.00g285410 vs. ExPASy TrEMBL
Match: A0A0A0LUC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005770 PE=4 SV=1) HSP 1 Score: 142 bits (358), Expect = 3.61e-41 Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of Csor.00g285410 vs. ExPASy TrEMBL
Match: A0A6J1C2W0 (uncharacterized protein LOC111007442 OS=Momordica charantia OX=3673 GN=LOC111007442 PE=4 SV=1) HSP 1 Score: 139 bits (351), Expect = 3.83e-40 Identity = 69/81 (85.19%), Postives = 72/81 (88.89%), Query Frame = 0
BLAST of Csor.00g285410 vs. ExPASy TrEMBL
Match: A0A5A7UUQ6 (Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002040 PE=4 SV=1) HSP 1 Score: 137 bits (346), Expect = 2.55e-39 Identity = 69/85 (81.18%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of Csor.00g285410 vs. TAIR 10
Match: AT5G13690.1 (alpha-N-acetylglucosaminidase family / NAGLU family ) HSP 1 Score: 90.9 bits (224), Expect = 1.0e-18 Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Csor.00g285410 vs. TAIR 10
Match: AT3G48180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.8 bits (203), Expect = 2.8e-16 Identity = 43/73 (58.90%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of Csor.00g285410 vs. TAIR 10
Match: AT1G19020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48180.1); Has 88 Blast hits to 88 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 81.3 bits (199), Expect = 8.1e-16 Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|