Csor.00g285060 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAAGGGTGGTGGTGGTGAAGAAATCCGATGGGTCTGGGGGGCGAGGAAACCGGTCTGGTTCGGGCTCGGTCGTGCGCTACGCCGAGTGCCAGAAGAATCACGCGGCGAAGCTCGGTGGGTTCGCGGTGGACGGTTGCCGTGAGTTCATGGCCAGAGGCGAGGAGGGGACTGAGGAGGCTCTCAGCTGCGCTGCTTGTGGCTGCCACCGGAATTTTCATAGAAGAGAGGTGGATGCTGAAGTTGTTTTCGAGTATTCTCCTCCAAACTCCGATCATCATTGA ATGAAGAAAAGGGTGGTGGTGGTGAAGAAATCCGATGGGTCTGGGGGGCGAGGAAACCGGTCTGGTTCGGGCTCGGTCGTGCGCTACGCCGAGTGCCAGAAGAATCACGCGGCGAAGCTCGGTGGGTTCGCGGTGGACGGTTGCCGTGAGTTCATGGCCAGAGGCGAGGAGGGGACTGAGGAGGCTCTCAGCTGCGCTGCTTGTGGCTGCCACCGGAATTTTCATAGAAGAGAGGTGGATGCTGAAGTTGTTTTCGAGTATTCTCCTCCAAACTCCGATCATCATTGA ATGAAGAAAAGGGTGGTGGTGGTGAAGAAATCCGATGGGTCTGGGGGGCGAGGAAACCGGTCTGGTTCGGGCTCGGTCGTGCGCTACGCCGAGTGCCAGAAGAATCACGCGGCGAAGCTCGGTGGGTTCGCGGTGGACGGTTGCCGTGAGTTCATGGCCAGAGGCGAGGAGGGGACTGAGGAGGCTCTCAGCTGCGCTGCTTGTGGCTGCCACCGGAATTTTCATAGAAGAGAGGTGGATGCTGAAGTTGTTTTCGAGTATTCTCCTCCAAACTCCGATCATCATTGA MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH Homology
BLAST of Csor.00g285060 vs. ExPASy Swiss-Prot
Match: Q9CA51 (Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.2e-27 Identity = 64/101 (63.37%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of Csor.00g285060 vs. ExPASy Swiss-Prot
Match: Q2Q493 (Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.4e-27 Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 0
BLAST of Csor.00g285060 vs. ExPASy Swiss-Prot
Match: Q9LJW5 (Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23 Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 0
BLAST of Csor.00g285060 vs. ExPASy Swiss-Prot
Match: Q9SB61 (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.8e-20 Identity = 44/71 (61.97%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of Csor.00g285060 vs. ExPASy Swiss-Prot
Match: B8BIU8 (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.4e-20 Identity = 46/71 (64.79%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of Csor.00g285060 vs. NCBI nr
Match: XP_022921765.1 (mini zinc finger protein 3-like [Cucurbita moschata] >KAG6589505.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 199 bits (507), Expect = 1.42e-64 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of Csor.00g285060 vs. NCBI nr
Match: XP_022987207.1 (mini zinc finger protein 3-like [Cucurbita maxima]) HSP 1 Score: 198 bits (504), Expect = 4.07e-64 Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of Csor.00g285060 vs. NCBI nr
Match: KAG7023191.1 (Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 197 bits (502), Expect = 8.21e-64 Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of Csor.00g285060 vs. NCBI nr
Match: XP_023516615.1 (mini zinc finger protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 196 bits (499), Expect = 2.36e-63 Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of Csor.00g285060 vs. NCBI nr
Match: XP_022135253.1 (mini zinc finger protein 3-like [Momordica charantia]) HSP 1 Score: 177 bits (450), Expect = 6.64e-56 Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Csor.00g285060 vs. ExPASy TrEMBL
Match: A0A6J1E6Q9 (mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429921 PE=4 SV=1) HSP 1 Score: 199 bits (507), Expect = 6.86e-65 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of Csor.00g285060 vs. ExPASy TrEMBL
Match: A0A6J1J9R5 (mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484829 PE=4 SV=1) HSP 1 Score: 198 bits (504), Expect = 1.97e-64 Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of Csor.00g285060 vs. ExPASy TrEMBL
Match: A0A6J1C4B2 (mini zinc finger protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007261 PE=4 SV=1) HSP 1 Score: 177 bits (450), Expect = 3.22e-56 Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Csor.00g285060 vs. ExPASy TrEMBL
Match: A0A0A0LSA6 (ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009710 PE=4 SV=1) HSP 1 Score: 171 bits (432), Expect = 1.91e-53 Identity = 83/95 (87.37%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of Csor.00g285060 vs. ExPASy TrEMBL
Match: A0A5A7UWS7 (Mini zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002440 PE=4 SV=1) HSP 1 Score: 170 bits (431), Expect = 2.79e-53 Identity = 83/96 (86.46%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of Csor.00g285060 vs. TAIR 10
Match: AT1G74660.1 (mini zinc finger 1 ) HSP 1 Score: 123.6 bits (309), Expect = 8.3e-29 Identity = 64/101 (63.37%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of Csor.00g285060 vs. TAIR 10
Match: AT1G18835.1 (mini zinc finger ) HSP 1 Score: 122.1 bits (305), Expect = 2.4e-28 Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 0
BLAST of Csor.00g285060 vs. TAIR 10
Match: AT3G28917.1 (mini zinc finger 2 ) HSP 1 Score: 109.8 bits (273), Expect = 1.2e-24 Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 0
BLAST of Csor.00g285060 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 ) HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21 Identity = 44/71 (61.97%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of Csor.00g285060 vs. TAIR 10
Match: AT2G02540.1 (homeobox protein 21 ) HSP 1 Score: 92.4 bits (228), Expect = 2.1e-19 Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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