Csor.00g284360 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g284360
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein MIS12 homolog
Location	Csor_Chr10: 1227905 .. 1230579 (+)
RNA-Seq Expression	Csor.00g284360
Synteny	Csor.00g284360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAGTAAAGGCGAGGAGGTATTCGATTCATTGAATCTGAATCCACAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGGTTGATGACGCTTTCGATTTTTATCAGACGTAGTGTCTCTCTTCTCATCTCTTCTACTTGAGGTTTTCAATTTTGTTTGGTTAATTTTATGCCTGACAATTCGTTTTCCTTTTTTTCCCTTCAGACAAGCATCGGCCTCCTTGAAGACCGAGGGCTCGGATAGATCCCAAGATCTTATCCTGGTAAGGTTTATGTTGTATTACTGACATTTTCTTATCAGCAGTTCATTTCCGATTTTTTAGTTTGGAATTGTTCCTGTTTTCCTTGAATAAATTGTTTATCTGTCTTACCTGTAGGGAATATCGCGGGTCCGAACGTTCGTCCAATCGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAATACTGTCTCAATCACTGTTTTTCAGTCCCTGAAGGTTTTTCTTTACCCTCAAATGTAGGTTCTTCTTCTACACTGTCTCTGATGAGGCTCTTGTCCTCTGGATATCGATATCCAAATTTTAATTTTATGGATATAGATAAAATAAAAATTAATAATTGAGTTGTTTTTGTTCCAAATTATAAATCTTATTGTTAGTGTTTGTATTCGTATTTTCATTGAGAGTAATCGATAAGATTTCGAATGTTTCTATAAACTCTTAATATCGATATCAAATCTTCATATTTACGGATATAGCGACATATCAACAAATATTTGTGAACTTACTCTATTGTTGTGTGTGTATATGACTTCAGAGCTTCCTCAATTTGTTTATTCTGGGACAAACAAATTTTGAAATTTTGGACAAAGCCCTATTACTGTGCATCATCAAGTTTCAATCTTTTTCAGGATATATTCATCGCTACTTTCAGATTCAGTCTCGAGTTTCCATATCTTTTGACCTTAGAGCTTCCTCATTTTGCTATGACTGTATTAGATTCTTTTTTATTCTAAAAGGAATGTTAGCAAATGTCGGCTGCATTTTCTACAAAATCTCTGTCATTGGTGCGTCACGTCTTTTCTTTCTCGACCATGTTTTAAGTTGCGAGATCTCACATCAGTTGAAGAGGAAAACGAAACATTCCTTATAAGGATGTGGAAACCTCTCCCTAGCAGACACATTTTAAAAATGTGAGGCTGACGGCATTACATAACGAGCTAAAACGGACAATATTTGCTAGCGGTAGGATTGAGCTGTTACAAATGGAGAGCCAATCACTTGACGGTATGAAGCACTGGTCGGAGTAGGGCTAGACCCTCTCCATAGTAGATGCATTTTAAAACCGTGAGGCTGACGACTATACATAACGAGCCAAAGTGGATAATATCAATGGGATTGTTAGAGAAGTCTAATCTAGTGGTATCTTGCACCCATACAGTTACTTGAGATTGGCAATTTCTGCTGTTTTACTGGTATCTTATTGGAAGCAGCAATATCTTATCGTCAAGTTGCTAAATTATCAATGATTCCCATATCTTGGTTGATAATTTTGAGATGTGGTTAATTGAATCTATGTATTCTCTTACTAGTTTTTCTTCTTCTAATGCAATAAATATATTTCTAATTCAGATTTAAATATTTTCTTTAAGTTGTCTTAGGATGAATCACCTGTTGTCACTTCAGTAAGTCGTGACTGCCTCTATGATGTGGATCTGGATACAGAGTTAGATTTTTTGAGGAATAAGCTCTCTGAGGTATTGAGTGTGTCGTATATTTATTACTTCTGTTGTTTATGTATATCATATTTCATGAAGAAATATGTTTTTCAGGTCAGAAAAGAGAATGTTGTATTGAACCAAGAACTACAAGCTTTAGAAAGACAAACTGCTTCCAGTAACTCCCAAGTCAATCGTTTCAACGAAGCCTTACAATTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGGTAATTAAGATGTGCTTAAAATCGATTGTTTCTTTCTGCATTTCTGGGATTACATGCGCACTACTCTACTAGTATACTCATGAAGGCATACTCAAAATGAAATATACAAATCTTTTCCTCCGATAGGTAGTCCTGGCCTGCATATCCCATGGTGACACAAACTCTAATACATCCAAATGATATTTAGTGAACACCTGCAAGATCATTTCATTTTAGGCAATGTTTATATTATATGGCTAGTGGGTATCTCTCTTTGATTCCCATTTTCTGTTCATTCCATAAAAGAGGAACTCCAGTCTGTGAATAAGGCCATTTCCTTGCTTTTTTTTTAGATTTAAAGGCCACTTGCACAAAGTCTATTCATTGGCAGAAAAAAGCTGTTCCTGAGTTTAGGATTCAGACTTCTAACATATTTCAATTTGTAGCAGAAATGATGGGAACTGCATCTGAGCTGCGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAATCCAAGCTCACTAAAGTAGAGAAGATTCATACAAACGGAGATATCTCTCACCATCACAAGGGTAGGATTTTGAAGCTACTCCATGATCAATCAAGCTGGTTTTAGCTTTCTGGAGGATGCTCACATACTCGTTCATGCTTGTTTCTGTTCTGCAGGTTTCTCTAACGCTAAGCTGGATGACATTCAAGAATTTTTAGCTGATTTGAAGGCCCTTTGA

mRNA sequence

ATGGAAGGAAGTAAAGGCGAGGAGGTATTCGATTCATTGAATCTGAATCCACAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGGTTGATGACGCTTTCGATTTTTATCAGACACAAGCATCGGCCTCCTTGAAGACCGAGGGCTCGGATAGATCCCAAGATCTTATCCTGGGAATATCGCGGGTCCGAACGTTCGTCCAATCGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAATACTGTCTCAATCACTGTTTTTCAGTCCCTGAAGGTTTTTCTTTACCCTCAAATGATGAATCACCTGTTGTCACTTCAGTAAGTCGTGACTGCCTCTATGATGTGGATCTGGATACAGAGTTAGATTTTTTGAGGAATAAGCTCTCTGAGGTCAGAAAAGAGAATGTTGTATTGAACCAAGAACTACAAGCTTTAGAAAGACAAACTGCTTCCAGTAACTCCCAAGTCAATCGTTTCAACGAAGCCTTACAATTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCTGAGCTGCGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAATCCAAGCTCACTAAAGTAGAGAAGATTCATACAAACGGAGATATCTCTCACCATCACAAGGGTTTCTCTAACGCTAAGCTGGATGACATTCAAGAATTTTTAGCTGATTTGAAGGCCCTTTGA

Coding sequence (CDS)

ATGGAAGGAAGTAAAGGCGAGGAGGTATTCGATTCATTGAATCTGAATCCACAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGGTTGATGACGCTTTCGATTTTTATCAGACACAAGCATCGGCCTCCTTGAAGACCGAGGGCTCGGATAGATCCCAAGATCTTATCCTGGGAATATCGCGGGTCCGAACGTTCGTCCAATCGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAATACTGTCTCAATCACTGTTTTTCAGTCCCTGAAGGTTTTTCTTTACCCTCAAATGATGAATCACCTGTTGTCACTTCAGTAAGTCGTGACTGCCTCTATGATGTGGATCTGGATACAGAGTTAGATTTTTTGAGGAATAAGCTCTCTGAGGTCAGAAAAGAGAATGTTGTATTGAACCAAGAACTACAAGCTTTAGAAAGACAAACTGCTTCCAGTAACTCCCAAGTCAATCGTTTCAACGAAGCCTTACAATTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCTGAGCTGCGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAATCCAAGCTCACTAAAGTAGAGAAGATTCATACAAACGGAGATATCTCTCACCATCACAAGGGTTTCTCTAACGCTAAGCTGGATGACATTCAAGAATTTTTAGCTGATTTGAAGGCCCTTTGA

Protein sequence

MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLILGISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLDTELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKAL

Homology

[Close]

BLAST of Csor.00g284360 vs. ExPASy Swiss-Prot
Match: Q2V0Z5 (Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.7e-57
Identity = 126/247 (51.01%), Postives = 174/247 (70.45%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSD--RSQDL 60
           MEGSK E VFDS+NLNPQ+FINEA+N V+D VD AFDFY   AS SLK +GSD  +SQ L
Sbjct: 1   MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60

Query: 61  ILGISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVD 120
             GI+RVR  + S +D RL +WE Y L  CF+VP+GF LP ++ES   +SV +D LYD++
Sbjct: 61  SNGIARVRGLLLSVIDNRLKLWESYSLRFCFAVPDGFVLPKSEES---SSVHQDGLYDLE 120

Query: 121 LDTELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQ 180
           LD ELD LR+KL+ V K +V L+ ELQALER + S    +   NEAL+LY+++S++E+F+
Sbjct: 121 LDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIFK 180

Query: 181 EMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFS----NAKLDDIQEF 240
           EM   ASELRA + +LK RRM+ S+  KV++      + +H K FS    + KL+D+++F
Sbjct: 181 EMTKMASELRASVERLKTRRMKASESAKVKR------LKNHGKEFSAMTFDGKLEDLEKF 238

Query: 241 LADLKAL 242
            A+L+ +
Sbjct: 241 QAELRKM 238

[Close]

BLAST of Csor.00g284360 vs. NCBI nr
Match: KAG6589575.1 (Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 460 bits (1184), Expect = 4.93e-163
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
           MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
           GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180
           TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240
           MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240

[Close]

BLAST of Csor.00g284360 vs. NCBI nr
Match: KAG7023263.1 (Protein MIS12-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 457 bits (1175), Expect = 1.16e-161
Identity = 239/241 (99.17%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
           MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
           GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180
           TELDFLRNKLSEVRKENVVLNQELQALERQ ASSNSQVNRFNEALQLYE+NSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240
           MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240

[Close]

BLAST of Csor.00g284360 vs. NCBI nr
Match: XP_023515499.1 (protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456 bits (1174), Expect = 1.65e-161
Identity = 239/241 (99.17%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
           MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDL L
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLSL 60

Query: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
           GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180
           TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240
           MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKT 240

[Close]

BLAST of Csor.00g284360 vs. NCBI nr
Match: XP_022921372.1 (protein MIS12 homolog [Cucurbita moschata])

HSP 1 Score: 454 bits (1169), Expect = 9.55e-161
Identity = 237/241 (98.34%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
           MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
           GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180
           TELDFLRNKLSEVRKEN+VLNQELQALERQ ASSNSQVNRFNEALQLYE+NSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENIVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240
           MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGD SHHHKGFSNAKLDDIQEFLADLKA
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDASHHHKGFSNAKLDDIQEFLADLKA 240

[Close]

BLAST of Csor.00g284360 vs. NCBI nr
Match: XP_023515498.1 (protein MIS12 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452 bits (1162), Expect = 1.16e-159
Identity = 239/242 (98.76%), Postives = 239/242 (98.76%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
           MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDL L
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLSL 60

Query: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
           GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQ-E 180
           TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQ E
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQAE 180

Query: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240
           MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240

[Close]

BLAST of Csor.00g284360 vs. ExPASy TrEMBL
Match: A0A6J1E0A1 (protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1)

HSP 1 Score: 454 bits (1169), Expect = 4.62e-161
Identity = 237/241 (98.34%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
           MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
           GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180
           TELDFLRNKLSEVRKEN+VLNQELQALERQ ASSNSQVNRFNEALQLYE+NSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENIVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240
           MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGD SHHHKGFSNAKLDDIQEFLADLKA
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDASHHHKGFSNAKLDDIQEFLADLKA 240

[Close]

BLAST of Csor.00g284360 vs. ExPASy TrEMBL
Match: A0A6J1JME3 (protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)

HSP 1 Score: 451 bits (1160), Expect = 1.09e-159
Identity = 236/241 (97.93%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
           MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
           GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180
           TELDFLR  LSEVRKEN+VLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM
Sbjct: 121 TELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240
           MGTASELRAKIGKLKKRRMEESKLTKVEKIHTN DISHHHKGFSNAKLDDIQEFLADLK 
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADLKT 240

[Close]

BLAST of Csor.00g284360 vs. ExPASy TrEMBL
Match: A0A6J1JD43 (protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)

HSP 1 Score: 446 bits (1148), Expect = 7.62e-158
Identity = 236/242 (97.52%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
           MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
           GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQ-E 180
           TELDFLR  LSEVRKEN+VLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQ E
Sbjct: 121 TELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQAE 180

Query: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240
           MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTN DISHHHKGFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADLK 240

[Close]

BLAST of Csor.00g284360 vs. ExPASy TrEMBL
Match: A0A6J1C2Q6 (protein MIS12 homolog OS=Momordica charantia OX=3673 GN=LOC111006900 PE=3 SV=1)

HSP 1 Score: 409 bits (1050), Expect = 6.32e-143
Identity = 210/241 (87.14%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
           MEGSKGE VFDSLNLNPQLFINEALN+VDDLVDDAFDFYQ QASA+LKTEG D+SQDLI+
Sbjct: 1   MEGSKGEAVFDSLNLNPQLFINEALNLVDDLVDDAFDFYQLQASATLKTEGVDKSQDLIM 60

Query: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
           GISRVR+FV S LDKRLAMWEKYCLNHCF+VPEGFSLPSNDESP  TS+S DCLYDV LD
Sbjct: 61  GISRVRSFVHSVLDKRLAMWEKYCLNHCFAVPEGFSLPSNDESPADTSISHDCLYDVGLD 120

Query: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180
           TELD LRN+LSEVR+ENVVLNQELQALERQTASSNSQ+N FNEAL+LYE+ SVNE FQE+
Sbjct: 121 TELDSLRNRLSEVREENVVLNQELQALERQTASSNSQINHFNEALELYEETSVNERFQEV 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240
           M TASELRAKIGKLKKRR+EESKLTKVEK+HTNGD+SHHHKGFSNAKLDDIQEFLADLK 
Sbjct: 181 MNTASELRAKIGKLKKRRIEESKLTKVEKVHTNGDMSHHHKGFSNAKLDDIQEFLADLKT 240

[Close]

BLAST of Csor.00g284360 vs. ExPASy TrEMBL
Match: A0A5A7US57 (Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00040 PE=3 SV=1)

HSP 1 Score: 395 bits (1016), Expect = 8.91e-138
Identity = 206/241 (85.48%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
           MEGSKGE VF+SLNLNPQLFINEALN VDDLVDDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1   MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASAALKTEGSDRSQDLTL 60

Query: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
           GIS+VR  VQ GLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP VTS++ D   DVDLD
Sbjct: 61  GISQVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSINHD--QDVDLD 120

Query: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180
           TELD LRNKLSEVRKEN+VLNQELQALERQTASSNSQ++ FNEALQLYEQ+SVN+MFQEM
Sbjct: 121 TELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240
           + TASELRAKIGK+KKRR EE+KL KVEK+HTNGDISHHH GFSNAKLDDIQEFL+DLK 
Sbjct: 181 IKTASELRAKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKK 239

[Close]

BLAST of Csor.00g284360 vs. TAIR 10
Match: AT5G35520.1 (minichromosome instability 12 (mis12)-like )

HSP 1 Score: 222.6 bits (566), Expect = 3.3e-58
Identity = 126/247 (51.01%), Postives = 174/247 (70.45%), Query Frame = 0


Query: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSD--RSQDL 60
           MEGSK E VFDS+NLNPQ+FINEA+N V+D VD AFDFY   AS SLK +GSD  +SQ L
Sbjct: 1   MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60

Query: 61  ILGISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVD 120
             GI+RVR  + S +D RL +WE Y L  CF+VP+GF LP ++ES   +SV +D LYD++
Sbjct: 61  SNGIARVRGLLLSVIDNRLKLWESYSLRFCFAVPDGFVLPKSEES---SSVHQDGLYDLE 120

Query: 121 LDTELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQ 180
           LD ELD LR+KL+ V K +V L+ ELQALER + S    +   NEAL+LY+++S++E+F+
Sbjct: 121 LDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIFK 180

Query: 181 EMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFS----NAKLDDIQEF 240
           EM   ASELRA + +LK RRM+ S+  KV++      + +H K FS    + KL+D+++F
Sbjct: 181 EMTKMASELRASVERLKTRRMKASESAKVKR------LKNHGKEFSAMTFDGKLEDLEKF 238

Query: 241 LADLKAL 242
            A+L+ +
Sbjct: 241 QAELRKM 238

The following BLAST results are available for this feature:

BLAST of Csor.00g284360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V0Z5	4.7e-57	51.01	Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1	[more]

BLAST of Csor.00g284360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589575.1	4.93e-163	100.00	Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7023263.1	1.16e-161	99.17	Protein MIS12-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023515499.1	1.65e-161	99.17	protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022921372.1	9.55e-161	98.34	protein MIS12 homolog [Cucurbita moschata]	[more]
XP_023515498.1	1.16e-159	98.76	protein MIS12 homolog isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g284360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0A1	4.62e-161	98.34	protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1	[more]
A0A6J1JME3	1.09e-159	97.93	protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=...	[more]
A0A6J1JD43	7.62e-158	97.52	protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=...	[more]
A0A6J1C2Q6	6.32e-143	87.14	protein MIS12 homolog OS=Momordica charantia OX=3673 GN=LOC111006900 PE=3 SV=1	[more]
A0A5A7US57	8.91e-138	85.48	Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Csor.00g284360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35520.1	3.3e-58	51.01	minichromosome instability 12 (mis12)-like	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 123..164
IPR008685	Centromere protein Mis12	PFAM	PF05859	Mis12	coord: 11..141 e-value: 1.7E-20 score: 73.5
IPR008685	Centromere protein Mis12	PANTHER	PTHR14527	PROTEIN MIS12 HOMOLOG	coord: 1..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g284360.m01	Csor.00g284360.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0051382	kinetochore assembly
biological_process	GO:0000070	mitotic sister chromatid segregation
biological_process	GO:0034501	protein localization to kinetochore
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0000818	nuclear MIS12/MIND complex
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0005634	nucleus