Csor.00g284080 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g284080
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionglycine-rich RNA-binding protein 3, mitochondrial-like
LocationCsor_Chr10: 1381774 .. 1384803 (+)
RNA-Seq ExpressionCsor.00g284080
SyntenyCsor.00g284080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAAATTATAAATTATACAAATTTAGGGTACAAATTAGTAATGTTTAGAAAATTAGGGTGAAATTTATAATTTGTCGAAAAGTTTTGAAATTCGCCTCCGAAGATATTTTTTCGTGTCGTTTTGTGCACCGTCATCGATCCATCTGACGGTCAGGATTTCTCCTGCTTTGCTCCATAAATTCTTTTTTTCACTTCTCATATTCGTTAAAAACCCCAGCTGTTCGCAAGTCATCCTAGGGTTTTAGCATCGCAACGAGAGAGAAGAAGAACAAGGTTCGTTCTCTAATTACCCGATCTTCTCTGTCTGTGATTTTCCATTACATGTTCTTTTGCCTTCTGTATGTGCTTTGATGTTTGAATTACTTACGAAATCGTTGGAAATGTTCGTATCAAGTGTGTTGGACTTTTGATTGATGATCTCTTACTATCCTCCGCGTTATTTTTCCGGTGTATTAGATTTAGGAACTGGAAGAAATGATAGCCGCAAATAGGCGATGAGTCTTGTCTCTTTCTCGTGTTACGTATTCGAGCTTTTCATCACGGCCTCTTTTTCGTTCGCGTCTTGTTTTGGTTACTGGCTTTGATTTTATATCTCAACATGTTATGGTATACGAACGAGTGTTGGTGGTAAGGATCATATTGTTGAGTTTGAAATGTTCTTATCAACCACCAAAATCGAGCTTATGCTCGTTGGCGCTTAAAGGGATACTTATGAACGTTATTACGTACACAAGTGCCGCATTTCACTCCTTGCGAGTGTTCTATTTTTTTACTCTCTCCTGTTCAGTTGTTTTGTAGTATGTTCTGGTGATGAGTTTGTGAAGTGTGTTGCGACAGTGGTCTGTGTACTCTAATTTGTCGAAAATCAAAGTGGAACATAATTTTAGGCTAACGGAAAAGCTTTCATTGCTGCCTCTGATGTTGAATCTTCGCCACTAATCTCTTTCAGGGTGCTTCAAAATGGCTTTCCTAAGTAAGGTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGACTGGATTAAATTTGCAGGCGCCCAGCTTGTCTATCTTTCAAGCTGTACGATGGATGTCTTCAATGCAGAGTTCAAAAGTTTTTATCGGAGGTTCTATGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTAAGAACATGTAGACGCCAATTTCTTTTTCTTTATCTCGTATTCATATGCATGTTTATGATGACAGGTATTTCATACAGCACTGATGATCAAAGTCTGAGGGAAGCCTTTACTAAATATGGGGAAGTTATTGAAGGTATATCGCCATTCAACTGACTCATTTACAAGTTAAGTGTTGAAAACTATCTTAGAAGTATGTTCCCAATTACTATCATACCTTTACGCAACAAAAATGATATATTTAATAAACGCACTTTTGGAACCCGCATGGTCGAATCTGCCTGAGGAATTCTGTCCCTTTCAAATATTTTCTGAAATTATGGCCGAGCAGGTGGCCTTGGGGAGGGGTGGAGCTAGTGGATAGTGTCAAATCTGAAGTTTAGTAAAAATGTTGGTTTCCTTGTTTACCCTTCTTTTCTTTGCCCCCGTGACAGCTAGGGTCATTGTAGACCGCGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCACTGGATGGACAGGTAATGATTCTGCTGTCAGCTTATTGTGATTAAAAAGGATAAAACATCATGTTATACTCATATGCCAAAGTATACTATTGAGTTAATGCATCTCCGCATATAAAATGCTTCATGTCATTTGTCTGCTTTATTTCCTGTTTGACGATCGTGTCATTGTGTCAGTTGCATGAACATTGTATCTTATGAATGCATTATGAGAGCTTGAAATTGCGGAGATATTAAAGCTAATATCTGAGGCCATTCTCTATAATATTCTCAACAATTAAATTGTGTACTAATGTGAAGTGTTCTAGGAGCTGTCACGTTGATTGGTTATTTATTCTCAAAGTACATATATATGTATATGTATATTTCTGAATGTTGTGTGATTAAGGCGAGTTGTATATTGGAAACTTGTCCCAATTTCTGTTATAATGCTGGCAGTCACTCCTCGTTCATGTTTTGGCACAGCTGTTCCTCTTTTATATTATCAAGGAAGCTGGCATCTTATGGTACAAAGTTAATTAAAAAATTTTAGACAAAAAAATAAAAAAAGAGGAAAAAATAACGTTTCAAAGAAAGATGAGTGATTATGTTGATTGTAATTTGGAGGCTTGTTCCATCTCCAAATCTATGAGAATGAATCAAATTTGAAATTAACTGGCTAATTAATGGCTTAGTTTATTATTGTTCACTTTTTCCCTTTCAAACAGGACCTTCATGGTCGTCGTGTGAGAGTGAATTATGCTAATGATAGAAGTCGTGGTATGGGTGGTGGCGGCTATGGCGGTGGCGGTGGTGGCTATGGTGGTGGCGGCTATGGTGGCGGTGGTGGTGGCTATGGTGGCGGTGGCTATGGCGGCGGCGGTGGCTATGGCGGCGGCGGTAGCTATGGTGGCGGTGGCGGTAGCTATGGTGGTGGGGCTTATGGCGGTGGTGTCTCTGGTGGTGGAGGCTATGGCGGTGAGAGTGGAGGAGGTTTTGGGTCAGGATTTAGTGCTGGAGACAACTATTCAAGCAGTTTTGGCAGTGGTAGCCAAGGAAGCGGAGGAAATTATGGTACAGGTGGGAATGATGCTGGCTCCAACGCTGCTAGCAATTTTGCTAGTGGAAACACATTCGGCAGTGGAACTAGCGCTGATTTTGATACCAATGTCAGCAACGGTGGTGGCGACTATTTTGCCAACAGTGGGTCTGATGCAAGCTCTGGGTTTGGAGGATACACTGGCGGGGATCAACTTGGCAGCAACGAAGCTAACACCCTGAATGCATCCGGAGATCAAGGCCTAGGGGAGCAACTGGAAGGCAATGATAGGGATGAAGATGACAACGCAGACGACTTCGCTAAAAGAGCCTAA

mRNA sequence

ATGCATCGCAACGAGAGAGAAGAAGAACAAGGGTGCTTCAAAATGGCTTTCCTAAGTAAGGTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGACTGGATTAAATTTGCAGGCGCCCAGCTTGTCTATCTTTCAAGCTGTACGATGGATGTCTTCAATGCAGAGTTCAAAAGTTTTTATCGGAGGTATTTCATACAGCACTGATGATCAAAGTCTGAGGGAAGCCTTTACTAAATATGGGGAAGTTATTGAAGCTAGGGTCATTGTAGACCGCGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCACTGGATGGACAGGACCTTCATGGTCGTCGTGTGAGAGTGAATTATGCTAATGATAGAAGTCGTGGTATGGGTGGTGGCGGCTATGGCGGTGGCGGTGGTGGCTATGGTGGTGGCGGCTATGGTGGCGGTGGTGGTGGCTATGGTGGCGGTGGCTATGGCGGCGGCGGTGGCTATGGCGGCGGCGGTAGCTATGGTGGCGGTGGCGGTAGCTATGGTGGTGGGGCTTATGGCGGTGGTGTCTCTGGTGGTGGAGGCTATGGCGGTGAGAGTGGAGGAGGTTTTGGGTCAGGATTTAGTGCTGGAGACAACTATTCAAGCAGTTTTGGCAGTGGTAGCCAAGGAAGCGGAGGAAATTATGGTACAGGTGGGAATGATGCTGGCTCCAACGCTGCTAGCAATTTTGCTAGTGGAAACACATTCGGCAGTGGAACTAGCGCTGATTTTGATACCAATGTCAGCAACGGTGGTGGCGACTATTTTGCCAACAGTGGGTCTGATGCAAGCTCTGGGTTTGGAGGATACACTGGCGGGGATCAACTTGGCAGCAACGAAGCTAACACCCTGAATGCATCCGGAGATCAAGGCCTAGGGGAGCAACTGGAAGGCAATGATAGGGATGAAGATGACAACGCAGACGACTTCGCTAAAAGAGCCTAA

Coding sequence (CDS)

ATGCATCGCAACGAGAGAGAAGAAGAACAAGGGTGCTTCAAAATGGCTTTCCTAAGTAAGGTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGACTGGATTAAATTTGCAGGCGCCCAGCTTGTCTATCTTTCAAGCTGTACGATGGATGTCTTCAATGCAGAGTTCAAAAGTTTTTATCGGAGGTATTTCATACAGCACTGATGATCAAAGTCTGAGGGAAGCCTTTACTAAATATGGGGAAGTTATTGAAGCTAGGGTCATTGTAGACCGCGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCACTGGATGGACAGGACCTTCATGGTCGTCGTGTGAGAGTGAATTATGCTAATGATAGAAGTCGTGGTATGGGTGGTGGCGGCTATGGCGGTGGCGGTGGTGGCTATGGTGGTGGCGGCTATGGTGGCGGTGGTGGTGGCTATGGTGGCGGTGGCTATGGCGGCGGCGGTGGCTATGGCGGCGGCGGTAGCTATGGTGGCGGTGGCGGTAGCTATGGTGGTGGGGCTTATGGCGGTGGTGTCTCTGGTGGTGGAGGCTATGGCGGTGAGAGTGGAGGAGGTTTTGGGTCAGGATTTAGTGCTGGAGACAACTATTCAAGCAGTTTTGGCAGTGGTAGCCAAGGAAGCGGAGGAAATTATGGTACAGGTGGGAATGATGCTGGCTCCAACGCTGCTAGCAATTTTGCTAGTGGAAACACATTCGGCAGTGGAACTAGCGCTGATTTTGATACCAATGTCAGCAACGGTGGTGGCGACTATTTTGCCAACAGTGGGTCTGATGCAAGCTCTGGGTTTGGAGGATACACTGGCGGGGATCAACTTGGCAGCAACGAAGCTAACACCCTGAATGCATCCGGAGATCAAGGCCTAGGGGAGCAACTGGAAGGCAATGATAGGGATGAAGATGACAACGCAGACGACTTCGCTAAAAGAGCCTAA

Protein sequence

MHRNEREEEQGCFKMAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGGAYGGGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSNEANTLNASGDQGLGEQLEGNDRDEDDNADDFAKRA
Homology
BLAST of Csor.00g284080 vs. ExPASy Swiss-Prot
Match: Q9FNR1 (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG3 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-41
Identity = 186/340 (54.71%), Postives = 215/340 (63.24%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSK GNIL+Q  NK+    +   S S+FQA+R MS   SSK+FIGG++YS D+ SLR
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEV++ RVI+DRETGRSRGFGFVT+TSSE ASSAIQALDG+DLHGR V+VNYAN
Sbjct: 61  EAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 120

Query: 135 DRSR--GMGGGGYGGGGGGYGG-GGYGGGGGGYGG-GGYGGG-GGYGGGGSYGGGGGSYG 194
           DR+   G GGGGYGGGGGGYGG GGYGGG GGYGG GGYGGG GGYG     G  GG YG
Sbjct: 121 DRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYG-----GNSGGGYG 180

Query: 195 GGAYGG-GVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGN-DAGS-- 254
           G A GG G SG GGYGG++ G  G    AG  Y SS G GS  SG  YG G +  AG+  
Sbjct: 181 GNAAGGYGGSGAGGYGGDATGHGG----AGGGYGSSGGFGS--SGNTYGEGSSASAGAVG 240

Query: 255 --NAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGG----YTGGDQLGS 314
             N +S + S NT+GS       +N    G   F  S    SS FGG    +T G Q G 
Sbjct: 241 DYNGSSGYGSANTYGS-------SNGGFAGDSQFGGSPVGNSSQFGGDNTQFTAGGQFG- 300

Query: 315 NEANTLNASGDQGLGEQLEGNDRDED----DNADDFAKRA 336
                    G+   G   +   + ED       +D AKRA
Sbjct: 301 ---------GEDQFGSMEKSETKMEDGPIGGEFEDVAKRA 309

BLAST of Csor.00g284080 vs. ExPASy Swiss-Prot
Match: Q9C909 (Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG5 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.2e-30
Identity = 149/305 (48.85%), Postives = 180/305 (59.02%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVG +  Q ++  T       S S+ Q++R MS   SSK+F+GGISYSTD+  LR
Sbjct: 1   MAFLSKVGRLFSQTSSHVTA------SSSMLQSIRCMS---SSKIFVGGISYSTDEFGLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAF+KYGEV++A++IVDRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGRR+RVNYA 
Sbjct: 61  EAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYAT 120

Query: 135 DRSRGMGGGGYGGGGGGYG---------GGGYGGGGGGYGG-----GGYGGGGGYGGGGS 194
           +R  G GG G+GG GGGYG          GGYGGG GGYGG     G  GGGGGYGG  S
Sbjct: 121 ERGSGFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYGGNSS 180

Query: 195 YGGGGGSYGGGA--YGGGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGT 254
           YGG  G YGG     G  V GGGGYG   GGG G G + G   S +F  GS  + G    
Sbjct: 181 YGGNAGGYGGNPPYSGNAVGGGGGYGSNFGGGGGYGVAGGVGGSENFAQGSSTNAG---- 240

Query: 255 GGNDAGSNAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLG 304
                       F S    G+ T  D  T    GG + F  S +       G T    +G
Sbjct: 241 --------FDDKFESNQPLGNDT--DHQTESGLGGDEQFGGSDNQFGDAENGNTENGPVG 281

BLAST of Csor.00g284080 vs. ExPASy Swiss-Prot
Match: Q43472 (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.7e-23
Identity = 97/157 (61.78%), Postives = 116/157 (73.89%), Query Frame = 0

Query: 58  KVFIGGISYSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 117
           + F+GG+ ++TDDQSL+ AF+KYG+VI++++I DRETGRSRGFGFVT+ S E    AI+A
Sbjct: 7   RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66

Query: 118 LDGQDLHGRRVRVNYANDRSRGMGGGGYGGGGGGY-------GGGGYGGGGGGYGGGGYG 177
           ++GQDL GR + VN A  R R  GGGG+GGGGGGY       GGGGYGGGGGGYGGG  G
Sbjct: 67  MNGQDLDGRNITVNEAQSR-RSDGGGGFGGGGGGYGGQRREGGGGGYGGGGGGYGGGRSG 126

Query: 178 GGGGY----GGGGSYGGGGGSYGGGAYGGGVSGGGGY 204
           GGGGY    GGGG YGGGGG YGG     G SGGG +
Sbjct: 127 GGGGYGSRDGGGGGYGGGGGGYGGSR---GGSGGGNW 159

BLAST of Csor.00g284080 vs. ExPASy Swiss-Prot
Match: Q99070 (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.4e-21
Identity = 94/159 (59.12%), Postives = 120/159 (75.47%), Query Frame = 0

Query: 58  KVFIGGISYSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 117
           + F+GG++++T++++L +AF  +G+VI+++VI DRETGRSRGFGFVT++S +    AI+ 
Sbjct: 9   RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68

Query: 118 LDGQDLHGRRVRVNYANDRSRGMGGGGYGGGGGGYG---GGGYGGGGGGYGGGGYGGGGG 177
           ++G++L GR + VN A  R  G GGGGYGGGGGGYG   GGGYGGGGGGY GG   GGGG
Sbjct: 69  MNGKELDGRNITVNQAQSRGGGGGGGGYGGGGGGYGGREGGGYGGGGGGY-GGRREGGGG 128

Query: 178 YGGGGSYGGGGGSYGGGAYGGGVSGGGGYGGESGGGFGS 214
           YGGGG YGGGGG YGG   GGG  GGGGYGG  G   G+
Sbjct: 129 YGGGG-YGGGGGGYGGREGGGGYGGGGGYGGNRGDSGGN 165

BLAST of Csor.00g284080 vs. ExPASy Swiss-Prot
Match: P49311 (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.4e-20
Identity = 93/164 (56.71%), Postives = 117/164 (71.34%), Query Frame = 0

Query: 58  KVFIGGISYSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 117
           + F+GG++++TD++SL  AF+++GE++++++I DRETGRSRGFGFVT+   +    AI+ 
Sbjct: 9   RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68

Query: 118 LDGQDLHGRRVRVNYANDRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGG 177
           ++GQDL GR + VN A  R  G GGGG GGGGG  GGGGYGGGGGGYGGG   GGG  GG
Sbjct: 69  MNGQDLDGRSITVNEAQSRGSGAGGGGRGGGGGYRGGGGYGGGGGGYGGGRREGGGYSGG 128

Query: 178 GGSY---GGGGGSYGGGAYGGGVSGGGGYGGESGGGFGSGFSAG 219
           GG Y   GGGGG YG    GGG   GGGYGG  GGG+G G   G
Sbjct: 129 GGGYSSRGGGGGGYG----GGGRRDGGGYGGGEGGGYGGGGGGG 168

BLAST of Csor.00g284080 vs. NCBI nr
Match: KAG6589603.1 (Glycine-rich RNA-binding protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 551 bits (1421), Expect = 5.10e-196
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0

Query: 1   MHRNEREEEQGCFKMAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVF 60
           MHRNEREEEQGCFKMAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVF
Sbjct: 1   MHRNEREEEQGCFKMAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVF 60

Query: 61  IGGISYSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDG 120
           IGGISYSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDG
Sbjct: 61  IGGISYSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDG 120

Query: 121 QDLHGRRVRVNYANDRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGS 180
           QDLHGRRVRVNYANDRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGS
Sbjct: 121 QDLHGRRVRVNYANDRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGS 180

Query: 181 YGGGGGSYGGGAYGGGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGG 240
           YGGGGGSYGGGAYGGGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGG
Sbjct: 181 YGGGGGSYGGGAYGGGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGG 240

Query: 241 NDAGSNAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSN 300
           NDAGSNAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSN
Sbjct: 241 NDAGSNAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSN 300

Query: 301 EANTLNASGDQGLGEQLEGNDRDEDDNADDFAKRA 335
           EANTLNASGDQGLGEQLEGNDRDEDDNADDFAKRA
Sbjct: 301 EANTLNASGDQGLGEQLEGNDRDEDDNADDFAKRA 335

BLAST of Csor.00g284080 vs. NCBI nr
Match: KAG7023294.1 (Glycine-rich RNA-binding protein 3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 509 bits (1310), Expect = 1.96e-179
Identity = 314/321 (97.82%), Postives = 314/321 (97.82%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 135 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGGAYG 194
           DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYG      GGGYGG GSYGGGGGSYGGGAYG
Sbjct: 121 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYG------GGGYGGSGSYGGGGGSYGGGAYG 180

Query: 195 GGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASG 254
           GGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASG
Sbjct: 181 GGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASG 240

Query: 255 NTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSNEANTLNASGDQGLG 314
           NTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSNEANTLNASGDQGLG
Sbjct: 241 NTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSNEANTLNASGDQGLG 300

Query: 315 EQLEGNDRDEDDNADDFAKRA 335
           EQLEGNDRDEDDNADDFAKRA
Sbjct: 301 EQLEGNDRDEDDNADDFAKRA 315

BLAST of Csor.00g284080 vs. NCBI nr
Match: XP_022921902.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 497 bits (1280), Expect = 7.52e-175
Identity = 311/321 (96.88%), Postives = 312/321 (97.20%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVGNILRQGANKRTGLN QAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNFQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 135 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGGAYG 194
           DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGG    GGGYGGG SYGGGGGSYGGG+YG
Sbjct: 121 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGG----GGGYGGG-SYGGGGGSYGGGSYG 180

Query: 195 GGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASG 254
           GG SGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASG
Sbjct: 181 GGGSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASG 240

Query: 255 NTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSNEANTLNASGDQGLG 314
           NTFGSGTSA FDTNVSNGGGDYFANSGSDASSGFGGYTGGDQ GSNEANTLNASGDQGLG
Sbjct: 241 NTFGSGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNEANTLNASGDQGLG 300

Query: 315 EQLEGNDRDEDDNADDFAKRA 335
           EQLEGNDRDEDDNADDFAKRA
Sbjct: 301 EQLEGNDRDEDDNADDFAKRA 316

BLAST of Csor.00g284080 vs. NCBI nr
Match: XP_023516049.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479 bits (1232), Expect = 1.58e-167
Identity = 303/327 (92.66%), Postives = 306/327 (93.58%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVF+GGISY+TDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFVGGISYNTDDQSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 135 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGGAYG 194
           DRSRGMGGGGYGGGGGGYGGGG     GGYGGG YG     GGGGSYGGGGGSYGGGAYG
Sbjct: 121 DRSRGMGGGGYGGGGGGYGGGG-----GGYGGGSYG-----GGGGSYGGGGGSYGGGAYG 180

Query: 195 GGV------SGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAA 254
           GG       SGGGGYGGESGGGFGS FSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAA
Sbjct: 181 GGGAYGGGGSGGGGYGGESGGGFGSVFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAA 240

Query: 255 SNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSNEANTLNAS 314
           SNFASGNTFGSGTSA FDTNVSNGGGDYFANSGSDASSGFGGYTGGDQ GSNEA+TLNAS
Sbjct: 241 SNFASGNTFGSGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNEADTLNAS 300

Query: 315 GDQGLGEQLEGNDRDEDDNADDFAKRA 335
           GDQGLGEQLEGNDRDEDDNADDFAKRA
Sbjct: 301 GDQGLGEQLEGNDRDEDDNADDFAKRA 317

BLAST of Csor.00g284080 vs. NCBI nr
Match: XP_022987968.1 (glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_022987969.1 glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 461 bits (1186), Expect = 1.47e-160
Identity = 299/325 (92.00%), Postives = 301/325 (92.62%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVGNILRQ ANKRTGLNLQAPSLSI QAVRWMSSMQSSKVF+GGISYSTDDQSLR
Sbjct: 1   MAFLSKVGNILRQSANKRTGLNLQAPSLSICQAVRWMSSMQSSKVFVGGISYSTDDQSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 135 DRSRGMGGG---GYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGG 194
           DRSRGMGGG   GYGGGGGGYGGGGYGGGG  YGGGGYG     GG G YGGGGGSY GG
Sbjct: 121 DRSRGMGGGYGGGYGGGGGGYGGGGYGGGG--YGGGGYG-----GGSGGYGGGGGSYSGG 180

Query: 195 AYGGGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNF 254
           AYGGG SGGGGYGGESGGGFGSGFS GDNYSSSFG GSQGSGGNYGTGGNDAGSN+ASNF
Sbjct: 181 AYGGGGSGGGGYGGESGGGFGSGFSTGDNYSSSFGGGSQGSGGNYGTGGNDAGSNSASNF 240

Query: 255 ASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSN-EANTLNASGD 314
           ASGN   SGTSA FDTNVSNGGGDYFANSGSDASSGFGGYTGGDQ GSN EANTLNASGD
Sbjct: 241 ASGN---SGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNDEANTLNASGD 300

Query: 315 QGLGEQLEGNDRDEDDNADDFAKRA 335
           QGLGEQLEGNDRDEDDNADDFAKRA
Sbjct: 301 QGLGEQLEGNDRDEDDNADDFAKRA 315

BLAST of Csor.00g284080 vs. ExPASy TrEMBL
Match: A0A6J1E1P2 (glycine-rich RNA-binding protein 3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111430026 PE=4 SV=1)

HSP 1 Score: 497 bits (1280), Expect = 3.64e-175
Identity = 311/321 (96.88%), Postives = 312/321 (97.20%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVGNILRQGANKRTGLN QAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNFQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 135 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGGAYG 194
           DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGG    GGGYGGG SYGGGGGSYGGG+YG
Sbjct: 121 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGG----GGGYGGG-SYGGGGGSYGGGSYG 180

Query: 195 GGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASG 254
           GG SGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASG
Sbjct: 181 GGGSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASG 240

Query: 255 NTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSNEANTLNASGDQGLG 314
           NTFGSGTSA FDTNVSNGGGDYFANSGSDASSGFGGYTGGDQ GSNEANTLNASGDQGLG
Sbjct: 241 NTFGSGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNEANTLNASGDQGLG 300

Query: 315 EQLEGNDRDEDDNADDFAKRA 335
           EQLEGNDRDEDDNADDFAKRA
Sbjct: 301 EQLEGNDRDEDDNADDFAKRA 316

BLAST of Csor.00g284080 vs. ExPASy TrEMBL
Match: A0A6J1JKW7 (glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485357 PE=4 SV=1)

HSP 1 Score: 461 bits (1186), Expect = 7.10e-161
Identity = 299/325 (92.00%), Postives = 301/325 (92.62%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVGNILRQ ANKRTGLNLQAPSLSI QAVRWMSSMQSSKVF+GGISYSTDDQSLR
Sbjct: 1   MAFLSKVGNILRQSANKRTGLNLQAPSLSICQAVRWMSSMQSSKVFVGGISYSTDDQSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 135 DRSRGMGGG---GYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGG 194
           DRSRGMGGG   GYGGGGGGYGGGGYGGGG  YGGGGYG     GG G YGGGGGSY GG
Sbjct: 121 DRSRGMGGGYGGGYGGGGGGYGGGGYGGGG--YGGGGYG-----GGSGGYGGGGGSYSGG 180

Query: 195 AYGGGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNF 254
           AYGGG SGGGGYGGESGGGFGSGFS GDNYSSSFG GSQGSGGNYGTGGNDAGSN+ASNF
Sbjct: 181 AYGGGGSGGGGYGGESGGGFGSGFSTGDNYSSSFGGGSQGSGGNYGTGGNDAGSNSASNF 240

Query: 255 ASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSN-EANTLNASGD 314
           ASGN   SGTSA FDTNVSNGGGDYFANSGSDASSGFGGYTGGDQ GSN EANTLNASGD
Sbjct: 241 ASGN---SGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNDEANTLNASGD 300

Query: 315 QGLGEQLEGNDRDEDDNADDFAKRA 335
           QGLGEQLEGNDRDEDDNADDFAKRA
Sbjct: 301 QGLGEQLEGNDRDEDDNADDFAKRA 315

BLAST of Csor.00g284080 vs. ExPASy TrEMBL
Match: A0A6J1JIA1 (glycine-rich RNA-binding protein 2, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485357 PE=4 SV=1)

HSP 1 Score: 443 bits (1139), Expect = 3.19e-154
Identity = 272/322 (84.47%), Postives = 274/322 (85.09%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVGNILRQ ANKRTGLNLQAPSLSI QAVRWMSSMQSSKVF+GGISYSTDDQSLR
Sbjct: 1   MAFLSKVGNILRQSANKRTGLNLQAPSLSICQAVRWMSSMQSSKVFVGGISYSTDDQSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 135 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGGAYG 194
           DRSRGMGGGGYGGGGG                                    SY GGAYG
Sbjct: 121 DRSRGMGGGGYGGGGG------------------------------------SYSGGAYG 180

Query: 195 GGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASG 254
           GG SGGGGYGGESGGGFGSGFS GDNYSSSFG GSQGSGGNYGTGGNDAGSN+ASNFASG
Sbjct: 181 GGGSGGGGYGGESGGGFGSGFSTGDNYSSSFGGGSQGSGGNYGTGGNDAGSNSASNFASG 240

Query: 255 NTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSN-EANTLNASGDQGL 314
           N   SGTSA FDTNVSNGGGDYFANSGSDASSGFGGYTGGDQ GSN EANTLNASGDQGL
Sbjct: 241 N---SGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNDEANTLNASGDQGL 283

Query: 315 GEQLEGNDRDEDDNADDFAKRA 335
           GEQLEGNDRDEDDNADDFAKRA
Sbjct: 301 GEQLEGNDRDEDDNADDFAKRA 283

BLAST of Csor.00g284080 vs. ExPASy TrEMBL
Match: A0A6J1EZK6 (glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440991 PE=4 SV=1)

HSP 1 Score: 350 bits (897), Expect = 4.56e-117
Identity = 241/337 (71.51%), Postives = 262/337 (77.74%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVGNILRQGANKR G +LQAPSLSI QAVRWMSSMQSSK+F+GGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRIGSDLQAPSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEV+EAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 135 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGGAYG 194
           DRSRG+GGGGYGGGGG             YGGGGYGGGGGYGGGG YG      G G YG
Sbjct: 121 DRSRGVGGGGYGGGGG-------------YGGGGYGGGGGYGGGGGYG----DGGAGGYG 180

Query: 195 GGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGT---------------- 254
           GG SGG  YG  SGG   +G+S+G NYS++FG GSQGSGGNYG                 
Sbjct: 181 GGGSGG--YGDGSGGFSTTGYSSGGNYSNNFGGGSQGSGGNYGNEFASDSRGSVSTGGGF 240

Query: 255 GGNDAGSNAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLG 314
           GGNDAG NA SNF+ G++         + NVS GGGDYF+N GS+ SSGFGGYTGGDQ  
Sbjct: 241 GGNDAGYNA-SNFSGGDSG--------NYNVSGGGGDYFSNRGSEESSGFGGYTGGDQFS 300

Query: 315 SNEANTLNASGDQGLGEQLEGNDRDEDDNADDFAKRA 335
           S E +T+NA G  GLGEQLEGNDRDEDD+ADDFAKRA
Sbjct: 301 SKETDTMNAPG-SGLGEQLEGNDRDEDDDADDFAKRA 308

BLAST of Csor.00g284080 vs. ExPASy TrEMBL
Match: A0A6J1I7Z2 (glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470449 PE=4 SV=1)

HSP 1 Score: 341 bits (875), Expect = 1.18e-113
Identity = 235/345 (68.12%), Postives = 262/345 (75.94%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVGNILRQGANK+ G +LQA SLSI QAVRWMSSMQSSK+F+GGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKKIGSDLQASSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEV+EAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 135 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGGAYG 194
           DRSRG+GGGGYGGGGG                  YGGGGGYGGGG YGGGG  YGGG YG
Sbjct: 121 DRSRGVGGGGYGGGGG------------------YGGGGGYGGGGGYGGGG--YGGGGYG 180

Query: 195 GGVSGGGGYGGESGGGFG--------SGFSAGDNYSSSFGSGSQGSGGNYGT-------- 254
           GG  GG  YGG   GG+G        +G+S+G NY+++FG GSQG+GGNYG         
Sbjct: 181 GGGPGG--YGGGGSGGYGDGSGGFSTTGYSSGGNYTNNFGGGSQGTGGNYGNEFASDSRG 240

Query: 255 --------GGNDAGSNAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGG 314
                   GGNDAG NA SNF+ G++         + NVS GGGDYF+N GS+ SSGFGG
Sbjct: 241 SVSTGGGFGGNDAGYNA-SNFSGGDSG--------NYNVSGGGGDYFSNRGSEESSGFGG 300

Query: 315 YTGGDQLGSNEANTLNASGDQGLGEQLEGNDRDEDDNADDFAKRA 335
           YTGGDQ  S E +++NA G  GLGEQLEGNDRDEDD+A+DFAKRA
Sbjct: 301 YTGGDQFSSKETDSMNAPG-SGLGEQLEGNDRDEDDDANDFAKRA 313

BLAST of Csor.00g284080 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 171.8 bits (434), Expect = 9.4e-43
Identity = 186/340 (54.71%), Postives = 215/340 (63.24%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSK GNIL+Q  NK+    +   S S+FQA+R MS   SSK+FIGG++YS D+ SLR
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAFTKYGEV++ RVI+DRETGRSRGFGFVT+TSSE ASSAIQALDG+DLHGR V+VNYAN
Sbjct: 61  EAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 120

Query: 135 DRSR--GMGGGGYGGGGGGYGG-GGYGGGGGGYGG-GGYGGG-GGYGGGGSYGGGGGSYG 194
           DR+   G GGGGYGGGGGGYGG GGYGGG GGYGG GGYGGG GGYG     G  GG YG
Sbjct: 121 DRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYG-----GNSGGGYG 180

Query: 195 GGAYGG-GVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGN-DAGS-- 254
           G A GG G SG GGYGG++ G  G    AG  Y SS G GS  SG  YG G +  AG+  
Sbjct: 181 GNAAGGYGGSGAGGYGGDATGHGG----AGGGYGSSGGFGS--SGNTYGEGSSASAGAVG 240

Query: 255 --NAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGG----YTGGDQLGS 314
             N +S + S NT+GS       +N    G   F  S    SS FGG    +T G Q G 
Sbjct: 241 DYNGSSGYGSANTYGS-------SNGGFAGDSQFGGSPVGNSSQFGGDNTQFTAGGQFG- 300

Query: 315 NEANTLNASGDQGLGEQLEGNDRDED----DNADDFAKRA 336
                    G+   G   +   + ED       +D AKRA
Sbjct: 301 ---------GEDQFGSMEKSETKMEDGPIGGEFEDVAKRA 309

BLAST of Csor.00g284080 vs. TAIR 10
Match: AT1G74230.1 (glycine-rich RNA-binding protein 5 )

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-31
Identity = 149/305 (48.85%), Postives = 180/305 (59.02%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAFLSKVG +  Q ++  T       S S+ Q++R MS   SSK+F+GGISYSTD+  LR
Sbjct: 1   MAFLSKVGRLFSQTSSHVTA------SSSMLQSIRCMS---SSKIFVGGISYSTDEFGLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           EAF+KYGEV++A++IVDRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGRR+RVNYA 
Sbjct: 61  EAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYAT 120

Query: 135 DRSRGMGGGGYGGGGGGYG---------GGGYGGGGGGYGG-----GGYGGGGGYGGGGS 194
           +R  G GG G+GG GGGYG          GGYGGG GGYGG     G  GGGGGYGG  S
Sbjct: 121 ERGSGFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYGGNSS 180

Query: 195 YGGGGGSYGGGA--YGGGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGT 254
           YGG  G YGG     G  V GGGGYG   GGG G G + G   S +F  GS  + G    
Sbjct: 181 YGGNAGGYGGNPPYSGNAVGGGGGYGSNFGGGGGYGVAGGVGGSENFAQGSSTNAG---- 240

Query: 255 GGNDAGSNAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLG 304
                       F S    G+ T  D  T    GG + F  S +       G T    +G
Sbjct: 241 --------FDDKFESNQPLGNDT--DHQTESGLGGDEQFGGSDNQFGDAENGNTENGPVG 281

BLAST of Csor.00g284080 vs. TAIR 10
Match: AT4G13850.1 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-29
Identity = 93/165 (56.36%), Postives = 118/165 (71.52%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAF +K+G +LRQ  +     N   P  S+  ++R M    S+K+FIGG+S+ TDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISS----NGNVPVTSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           +AF  +G+V++A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 135 DRSRGM----GGGGYGGGGGGY--GGGGYGGGGGGYGGGGYGGGG 174
           DR        GGGGY GGGGGY  GGGGYGGGGGGYGGGG GGGG
Sbjct: 121 DRPSAPRAYGGGGGYSGGGGGYGGGGGGYGGGGGGYGGGGDGGGG 157

BLAST of Csor.00g284080 vs. TAIR 10
Match: AT4G13850.2 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 116.7 bits (291), Expect = 3.6e-26
Identity = 89/162 (54.94%), Postives = 114/162 (70.37%), Query Frame = 0

Query: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74
           MAF +K+G +LRQ  +     N   P  S+  ++R M    S+K+FIGG+S+ TDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISS----NGNVPVTSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134
           +AF  +G+V++A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 135 DRSRGMGGGGYGGGGG---GYGGGGYGGGGGGYGGGGYGGGG 174
           DR        YGGGGG   G GGGGYGGGGGGYGGGG GGGG
Sbjct: 121 DRP--SAPRAYGGGGGYSYGGGGGGYGGGGGGYGGGGDGGGG 152

BLAST of Csor.00g284080 vs. TAIR 10
Match: AT2G21660.1 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 96.3 bits (238), Expect = 5.0e-20
Identity = 96/170 (56.47%), Postives = 117/170 (68.82%), Query Frame = 0

Query: 58  KVFIGGISYSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 117
           + F+GG++++TDD++L  AF +YG+VI++++I DRETGRSRGFGFVT+   +    AI+ 
Sbjct: 9   RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68

Query: 118 LDGQDLHGRRVRVNYANDRSRGMGGGGYGGGGGGY---GGGGYGGGGGGYGGGG---YGG 177
           ++GQDL GR + VN A  R  G GGG  GGGGGGY   GGGGY GGGG YGGGG    GG
Sbjct: 69  MNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGGGGGRREGG 128

Query: 178 GGGYGGGGSY---GGGGGSYGGGAYGGGVSGGGGYGGESGGGFGSGFSAG 219
           GG  GGGG Y   GGGGGSYGGG       GGGGYGG  GGG+G     G
Sbjct: 129 GGYSGGGGGYSSRGGGGGSYGGGRR----EGGGGYGGGEGGGYGGSGGGG 174

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FNR11.3e-4154.71Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Q9C9095.2e-3048.85Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Q434724.7e-2361.78Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=... [more]
Q990704.4e-2159.12Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1[more]
P493116.4e-2056.71Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
KAG6589603.15.10e-196100.00Glycine-rich RNA-binding protein 3, mitochondrial, partial [Cucurbita argyrosper... [more]
KAG7023294.11.96e-17997.82Glycine-rich RNA-binding protein 3, mitochondrial [Cucurbita argyrosperma subsp.... [more]
XP_022921902.17.52e-17596.88glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita moschata][more]
XP_023516049.11.58e-16792.66glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita pepo subsp. pe... [more]
XP_022987968.11.47e-16092.00glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita max... [more]
Match NameE-valueIdentityDescription
A0A6J1E1P23.64e-17596.88glycine-rich RNA-binding protein 3, mitochondrial-like OS=Cucurbita moschata OX=... [more]
A0A6J1JKW77.10e-16192.00glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita m... [more]
A0A6J1JIA13.19e-15484.47glycine-rich RNA-binding protein 2, mitochondrial-like isoform X2 OS=Cucurbita m... [more]
A0A6J1EZK64.56e-11771.51glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucurbita moschata OX=... [more]
A0A6J1I7Z21.18e-11368.12glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita m... [more]
Match NameE-valueIdentityDescription
AT5G61030.19.4e-4354.71glycine-rich RNA-binding protein 3 [more]
AT1G74230.13.7e-3148.85glycine-rich RNA-binding protein 5 [more]
AT4G13850.13.5e-2956.36glycine-rich RNA-binding protein 2 [more]
AT4G13850.23.6e-2654.94glycine-rich RNA-binding protein 2 [more]
AT2G21660.15.0e-2056.47cold, circadian rhythm, and rna binding 2 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 53..69
score: 25.0
coord: 188..198
score: 42.05
coord: 159..174
score: 60.16
coord: 233..251
score: 34.21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..313
NoneNo IPR availablePANTHERPTHR48027:SF1GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIALcoord: 15..180
NoneNo IPR availablePANTHERPTHR48027HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATEDcoord: 15..180
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 58..131
e-value: 6.3E-30
score: 115.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 59..129
e-value: 1.8E-22
score: 78.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 57..135
score: 22.298967
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 30..153
e-value: 1.6E-33
score: 117.6
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 33..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g284080.m01Csor.00g284080.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding