Csor.00g284030 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTGGGTTATGCCTGTTTTAGCTATTGGGCTTCTTATTCTGGCCATGACTGGCCATTCAAGTAAGCTCCTTGCGTTTCTATACTGGGTTTTCTTTTACTCCTTTTAGTTTGACTTCTCAATAATCTTTTCGCTGATTCGAGCCTTTTGCTTGTCAGCCATCTTTAAAGGCTATTCAAATGTGCATTAACCATCTCTACAGATATGTGTCTATAGATCTTCTAGTTATGGTCATCTTTATGTAGTCATTGTTCTTTTGTTTAAAAGAGAGCTTTCTTTTTTAGTTTGAAATTTGTGGTTCTTTTTGGATGGATAAGGGGCTTAAAAGTTCTGGGAGTGAGTTTCCAGTACTTTTGAAGTTTCTTATAGATGTGTAGATCTCGTTGTGTTTCGTTTATTTTCTTCTGTTTCTTCGTAAGTTCTTTGTTCCTTCGGCTCTCTCTTGAAATGGTGGCTTCTGGAACTTGTAGGTGCAACATGGTGCGTTTGCAAGGACGGAATAGGTGATACTGCTCTCCAGAAGACAATTGACTATGCTTGTGGAGCTGGGGCTGACTGTCTCCCTATTCATCAAAAGGGGGGCTGTTTCGCTCCCGACACGGTCAAGGCCCATTGTTCCTATGCTGCTAACAGCTACTTTCAGAGGAAGGGTCAAGCTCCTGGTTCCTGTGATTTTTCTGGCACAGCCATGGTCACCACTACTGACCCCAGTAAGATTTCGCTGTCTACAACCACATGTTTTTCTCTAGTTCCTTCTAAATAAGAGAAGGTTCAGTCAGTTATGATCTGATTAACTTTTAAGAAAGGAAAAAATGGAAACAAACACCTCACAGAACTTACTCGGATTCTAGTATATGCCACAAATTTGAACATTTTTGGCAATCTATCGAAGTTCCTTGGCCATCTATTTCACTTCTAAATTAATATGTTTTGTTTTCATATTTCTTATCATGTTCAGAAATGGAATCTGATTCTTTTTATTTTTTTATTTATAAATTTCTTGGTGTTTTCTCAGGCATTACAGGCTGCGTTTATCCTTCTAGCGCCAGGTATACTTCTGCACCTACTTCCACCATGTTTGAAAAAAAGAAAAAAAAAAAAAAGAATGGTAGGAATAGTAATAATTTCTTCCCATTTCAATATCTGGCAATCGCTTTATTAGAATAAGATTTTCTCTGATTTCTCCCAAATCCATGGCTAGACTCAAAATCTTATTCTTATTTTCTTATTTAGTGAACTCCATCTCTTTGAAATGAAATAACAGCATGATTTTTTTGTGAGTTTCACTTGGATTTCTTATCCACTTTAATCTTGTACGTGAGCATAATATTAAGAGTATTTTTACTTCATTTTGTGTTTTATTTTCATTTGAATAGAACTTTGAGCCTTTTTACTTTAACTGGATTAGAGCATCTTGTTAGTCAGAAACTTAACAAAAGATAAAGTTGGCTTCCGATAGTCATAGATAGATACTATTGGAAAATAGACTTTTGCAATTAGATTCGCCATCATCCCATTGTGCCGTAATTATAGATACTCTTTTCGTCAATTGACTATTTGTAGTTTCATGATCCTTTTTTCTGGCTTCTTCCCTGCCTGCGTTTTTCAACTTTTCACTTTCACTCAAGATGTGATAATTGTCACCGTCACATATAATTACTCCACACTGGTAAATACATCTATCCGAAAGTAAATGCTCGGATGAAAATGGAGTTTTTTCATAGTGATGATCAGATTTATGTTGCTCCTCGAGATGGGTAAATTATTGAGATTTGAGCCACATTTTAATGCCTCGAAAGCCAAGCCTAGGCAGACCATGATTTTTGGAAAAAGGGTTTCACATGTGGGTGAAGAAGCAGTTCATTTTCTTGGGGGAGGAACACTTTGTCTTCTCTCTTGAATCTAATTTGAAATGCTCTAGTCGAAAACTGGTCACTTGATGAGATTATCTCTAGATCCTTAACAAATGATGACAACTTTTCTTCATCTTCATTATGGATTGGAAAACGAAAAGCTGACCATTACTACATTAATGAATCCAAACCTTTCAGAACTGATTAACATTATGTTTCTGAAATTTGGCATAGAATTCAACAGATCGTGAGTAAACTAAAAACCAATGTGTTATCTGCTGTTGTAATATCTTTATCTAAAATGGGATTCATCTTATTTTTGGTAATCTGCTGTTGCAGCCCCGTAAACAGTGGCACTGTTCCAGTAACTGGAACACCAACCACCACCAGCCCGGGCACTGGATCAACTCCCACAACCAATACTCCATTTGGTTCTACAACCCCCACCGGCGTCATCGGAGGGAATGGCTACAGCAGTGGAAGCAACAGTTTAGGACCATCAGGCGTCGGCGGGATGAACTCCGACTACAGTGACAGTGGATCAAGACTCAAACTCACTCTAATTGCCAATGCAGTAGCTTATTTGTTCACTCTCTTGTTCTGTGGGCATATGGCTTGA ATGTCTTGGGTTATGCCTGTTTTAGCTATTGGGCTTCTTATTCTGGCCATGACTGGCCATTCAAGTGCAACATGGTGCGTTTGCAAGGACGGAATAGGTGATACTGCTCTCCAGAAGACAATTGACTATGCTTGTGGAGCTGGGGCTGACTGTCTCCCTATTCATCAAAAGGGGGGCTGTTTCGCTCCCGACACGGTCAAGGCCCATTGTTCCTATGCTGCTAACAGCTACTTTCAGAGGAAGGGTCAAGCTCCTGGTTCCTGTGATTTTTCTGGCACAGCCATGGTCACCACTACTGACCCCAGCATTACAGGCTGCGTTTATCCTTCTAGCGCCAGCCCCGTAAACAGTGGCACTGTTCCAGTAACTGGAACACCAACCACCACCAGCCCGGGCACTGGATCAACTCCCACAACCAATACTCCATTTGGTTCTACAACCCCCACCGGCGTCATCGGAGGGAATGGCTACAGCAGTGGAAGCAACAGTTTAGGACCATCAGGCGTCGGCGGGATGAACTCCGACTACAGTGACAGTGGATCAAGACTCAAACTCACTCTAATTGCCAATGCAGTAGCTTATTTGTTCACTCTCTTGTTCTGTGGGCATATGGCTTGA ATGTCTTGGGTTATGCCTGTTTTAGCTATTGGGCTTCTTATTCTGGCCATGACTGGCCATTCAAGTGCAACATGGTGCGTTTGCAAGGACGGAATAGGTGATACTGCTCTCCAGAAGACAATTGACTATGCTTGTGGAGCTGGGGCTGACTGTCTCCCTATTCATCAAAAGGGGGGCTGTTTCGCTCCCGACACGGTCAAGGCCCATTGTTCCTATGCTGCTAACAGCTACTTTCAGAGGAAGGGTCAAGCTCCTGGTTCCTGTGATTTTTCTGGCACAGCCATGGTCACCACTACTGACCCCAGCATTACAGGCTGCGTTTATCCTTCTAGCGCCAGCCCCGTAAACAGTGGCACTGTTCCAGTAACTGGAACACCAACCACCACCAGCCCGGGCACTGGATCAACTCCCACAACCAATACTCCATTTGGTTCTACAACCCCCACCGGCGTCATCGGAGGGAATGGCTACAGCAGTGGAAGCAACAGTTTAGGACCATCAGGCGTCGGCGGGATGAACTCCGACTACAGTGACAGTGGATCAAGACTCAAACTCACTCTAATTGCCAATGCAGTAGCTTATTTGTTCACTCTCTTGTTCTGTGGGCATATGGCTTGA MSWVMPVLAIGLLILAMTGHSSATWCVCKDGIGDTALQKTIDYACGAGADCLPIHQKGGCFAPDTVKAHCSYAANSYFQRKGQAPGSCDFSGTAMVTTTDPSITGCVYPSSASPVNSGTVPVTGTPTTTSPGTGSTPTTNTPFGSTTPTGVIGGNGYSSGSNSLGPSGVGGMNSDYSDSGSRLKLTLIANAVAYLFTLLFCGHMA Homology
BLAST of Csor.00g284030 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.5e-40 Identity = 96/185 (51.89%), Postives = 121/185 (65.41%), Query Frame = 0
BLAST of Csor.00g284030 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.0e-40 Identity = 94/188 (50.00%), Postives = 119/188 (63.30%), Query Frame = 0
BLAST of Csor.00g284030 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.0e-40 Identity = 101/195 (51.79%), Postives = 124/195 (63.59%), Query Frame = 0
BLAST of Csor.00g284030 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27 Identity = 89/219 (40.64%), Postives = 121/219 (55.25%), Query Frame = 0
BLAST of Csor.00g284030 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22 Identity = 65/146 (44.52%), Postives = 87/146 (59.59%), Query Frame = 0
BLAST of Csor.00g284030 vs. NCBI nr
Match: XP_022922094.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata] >KAG6589608.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 400 bits (1027), Expect = 2.69e-140 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Csor.00g284030 vs. NCBI nr
Match: XP_023515396.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 392 bits (1008), Expect = 2.12e-137 Identity = 201/205 (98.05%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Csor.00g284030 vs. NCBI nr
Match: XP_022988617.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita maxima]) HSP 1 Score: 384 bits (985), Expect = 6.82e-134 Identity = 197/205 (96.10%), Postives = 201/205 (98.05%), Query Frame = 0
BLAST of Csor.00g284030 vs. NCBI nr
Match: XP_038878558.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]) HSP 1 Score: 360 bits (925), Expect = 1.14e-124 Identity = 178/205 (86.83%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of Csor.00g284030 vs. NCBI nr
Match: KAG7023299.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 344 bits (883), Expect = 4.07e-118 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Csor.00g284030 vs. ExPASy TrEMBL
Match: A0A6J1E2D5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430147 PE=4 SV=1) HSP 1 Score: 400 bits (1027), Expect = 1.30e-140 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Csor.00g284030 vs. ExPASy TrEMBL
Match: A0A6J1JDI8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita maxima OX=3661 GN=LOC111485814 PE=4 SV=1) HSP 1 Score: 384 bits (985), Expect = 3.30e-134 Identity = 197/205 (96.10%), Postives = 201/205 (98.05%), Query Frame = 0
BLAST of Csor.00g284030 vs. ExPASy TrEMBL
Match: A0A5A7US74 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002920 PE=4 SV=1) HSP 1 Score: 337 bits (863), Expect = 1.34e-115 Identity = 170/205 (82.93%), Postives = 187/205 (91.22%), Query Frame = 0
BLAST of Csor.00g284030 vs. ExPASy TrEMBL
Match: A0A1S3BVT1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103494037 PE=4 SV=1) HSP 1 Score: 337 bits (863), Expect = 1.43e-114 Identity = 170/205 (82.93%), Postives = 187/205 (91.22%), Query Frame = 0
BLAST of Csor.00g284030 vs. ExPASy TrEMBL
Match: A0A0A0LSF3 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G013210 PE=4 SV=1) HSP 1 Score: 333 bits (853), Expect = 4.33e-114 Identity = 168/205 (81.95%), Postives = 188/205 (91.71%), Query Frame = 0
BLAST of Csor.00g284030 vs. TAIR 10
Match: AT5G08000.1 (glucan endo-1,3-beta-glucosidase-like protein 3 ) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41 Identity = 96/185 (51.89%), Postives = 121/185 (65.41%), Query Frame = 0
BLAST of Csor.00g284030 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 ) HSP 1 Score: 167.2 bits (422), Expect = 1.4e-41 Identity = 101/195 (51.79%), Postives = 124/195 (63.59%), Query Frame = 0
BLAST of Csor.00g284030 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 ) HSP 1 Score: 167.2 bits (422), Expect = 1.4e-41 Identity = 94/188 (50.00%), Postives = 119/188 (63.30%), Query Frame = 0
BLAST of Csor.00g284030 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 152.9 bits (385), Expect = 2.8e-37 Identity = 91/176 (51.70%), Postives = 111/176 (63.07%), Query Frame = 0
BLAST of Csor.00g284030 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32 Identity = 76/148 (51.35%), Postives = 101/148 (68.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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