Csor.00g283420 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g283420
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionSuperoxide dismutase [Cu-Zn]
LocationCsor_Chr10: 9373422 .. 9376339 (-)
RNA-Seq ExpressionCsor.00g283420
SyntenyCsor.00g283420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAATCTCTAAAGATGGTAATGTAAAATTAGAGAGAAGCCATGGCGCTCACGTGACTCACGTGAGTATACCACACTTATGGGGGCGGTTACGGAGAGGGGTTGGTAACTACTCTGAATAGGAAATTACGAAAGTACCCCTTGAAGAATAGTAATGGAGCGAACAACCACACCACCGCTTGTCCTCTATATAAACTTCAAGAGCCCTAAGGCTTTTCAACTTCTAGAGTCTTCTACTGCTTCAATATCTCCCGACCTTTCTTTCAGCCGTTCAAGGGGTGTTCTGAGGTGAGCCTTCCTCTCTTTCTTTCGTTTCTTCTATGATTCTTTGTTTCTCAGATCCATCGCTGTACTGAAATCCGATCTGATTTTTGCTGTATTAGCTCCTTGTTATGATGCTTGGCTGTAATTCTTCCGAAATTCTACCTTAATCCAGTTGTTATTGTGATGATCTTCTTTTGGATGATATGATATCTAGTTTCATCTCAAATTTTGAAATGATTTGATTCATCGCTTGTAACAGTGTGATTTTGTACAATTCGATGCCGATCAAAACTGTGACAGTTGTACCGAATTTTACCTTAATGATTCCATAACGTTGACTATTTGGAACTTTAGATTGCTACTTTACCTGATTTGAGATAGTACGAAACTTGTGGTATTCATCATAATCGGTCGAGATTTTATGTACAGCTCGCATAATTATGAGCTTGTTCTTGTTATTTTGGATTGGAGTCCTTTTCTAAGGTAGGGCTGCACTTCATTCTTTTATTTCTCTCGATGAAGGTGCGGGATTTTTACCCTAAATTATTTGGCCCATTTGTGAAATGTCAAAATGCATGTTTTGCAAGGAGATGGTGATCTGGTGTCGTATCTGAAAGTTTCTGATTTCTTTCGTTGATTTCATGTTTTTCTTAGTTCTTATTTAATTTTGTTAGTGTGTTAGATCACAGGAAAGATGGTGAAGGCTGTGGCTGTTCTTGGAAATAGCGAGTGTGTTGTTGGAACTATCTTTTTCTCCCAAGAAGGAGATGGTAATATGGTGATTGGTTTCATCTGTGCTTGCCATGTTCATTTCTTCTCTGTCTTGTACTTAGACTGAAATTGTTTCAGGTCCAACCACTGTTACGGGCGATGTTTCTGGTCTCAAGGCTGGGCTTCATGGATTCCATGTTCATGCCATGGGTGACACAACTAACGGCTGCATGTCAACTGGTATTGCTATTGACATTTAGGATATTTTCATGACCTCTCTACTTTGAAGTAATTTAGATGTTTGTCAAACAATTGAAAATAGATGCCTTCCTTTATCCAGCATTAATTTTTTTTTTATTAGATCTCGGCAGTAAAATTTCTCAATATACTTACAGGACCACATTTCAACCCTGCTGGAAAACAGCATGGTGCTCCCGAGGATGAGAATCGCCATGCTGGTGATTTAGGGAACATTACTGTTGGTGAAGATGGTACGCTTCACATAGAATAAGTTCAATTCTTGCTGTGTTATGTTCTATTTCCTTTTTGGCATAACCCCCTTATATTATACTTGTTGAGGCTATTTTTGTAAGAATATGTTCTTATCTTAGATTTTCTTTGATATGTACCTAATCTGATGTTGGCTCTGATATCTTGTTCTATTTATTTAGTTGTTGAATACTAACACTTTCAACGTTGTGTACAGGAAAGGCTAGCTTTACCATTACTGATAACCAGGTATTTCCTTCTGCCCCTGTTTAATTAATTTGGTTAGGGAAAAACAATATGGTTCTTCCTCCTTGTGTTAACATTAGATCTTACATGCAGATTCCTCTCTCTGGACCTAACTCCATTATCGGAAGGGCTGTTGTAGTCCATGCTGACCCCGACGATCTTGGCAAGGGTAATTTCTCTAAGCATTTGTTGTTCGATTGTCCTATGAGCTATTCTTGATAGTATCTCATTCTATATCTTCCATATCCCGACTCAAGAAGATTATTGTCAATCAGTAAGGCTGTTCCACAGACAATTATTTATTTTCTTCAAAAAAATTCATAGTGATAATCTCCCATGTTTTGTTTAGTTTCTTTCATCTGCGGGGTTCATGAACAGGCTTATAGAACAGAAGTCTGAACTGGATCAATTATATAATAGAGTTCAAATGATTATTTGGGGGCGGTTAGAACTCAGTTGTTACACAAAACCAATTGTCTATCAATATTCAAAGGGGAAATAACATGGTAGGGATCAATTTTAGGACTCCGTGCTCGAAAACCATGTTAACTATCACTAAACTCTCAAAAGCATAAGCTGATAGGTAAGAGGAAAATAAGTAGGGTATTTTTCACTGAATTTTCTTCATGTTTGGAAGTCTTACTAGGTGCTTTGGAAAAACTTCAAAACATCTAAAAATGCTTTGTGAGAAAGCATTTGGAGAGTGATTGATTGCATTCAAATGTGCTTTTAAGATTGTAAAATATTTTCTATCAAACACTTCTTACTAGTGTCTTTTTGCTTAAAGTATCATGAAGTATTATCTACCATGGGTTGTTGATGGGCCACCTACTTAGGATTTAATATTGTATGTGTTACTCTTATAACCGAAATGTAGTAAAGTCGGATAGTTCTCTCACAAGAATAACGAAAATGTGTGCCAAATGTATCTTGAAGCGTTCCCAAACATGCCTTTTTATGTATTATCTTATCAATTAGGTAATTTTTGATATGTAGGTGGACATGAACTCAGCTTATCTACTGGAAATGCTGGTGCTAGAGTAGCCTGTGGTATGCGAATTCAAACCCTGAAATTTTTATATTCTTCTTCCATCCGGCCTTGCTCTATTAAGGTTATATGCCGTTCACCACATTTCTGAACCGTTAACATCATTTCTTTTGTCTTTTTTTTTTTTTATTTTCAGGCATTATTGGGCTTCAAGGTTGA

mRNA sequence

ATGGTAATCTCTAAAGATGGTAATGTAAAATTAGAGAGAAGCCATGGCGCTCACGTGACTCACCCGTTCAAGGGGTGTTCTGAGATCACAGGAAAGATGGTGAAGGCTGTGGCTGTTCTTGGAAATAGCGAGTGTGTTGTTGGAACTATCTTTTTCTCCCAAGAAGGAGATGGTCCAACCACTGTTACGGGCGATGTTTCTGGTCTCAAGGCTGGGCTTCATGGATTCCATGTTCATGCCATGGGTGACACAACTAACGGCTGCATGTCAACTGGACCACATTTCAACCCTGCTGGAAAACAGCATGGTGCTCCCGAGGATGAGAATCGCCATGCTGGTGATTTAGGGAACATTACTGTTGGTGAAGATGGAAAGGCTAGCTTTACCATTACTGATAACCAGATTCCTCTCTCTGGACCTAACTCCATTATCGGAAGGGCTGTTGTAGTCCATGCTGACCCCGACGATCTTGGCAAGGGTGGACATGAACTCAGCTTATCTACTGGAAATGCTGGTGCTAGAGTAGCCTGTGGCATTATTGGGCTTCAAGGTTGA

Coding sequence (CDS)

ATGGTAATCTCTAAAGATGGTAATGTAAAATTAGAGAGAAGCCATGGCGCTCACGTGACTCACCCGTTCAAGGGGTGTTCTGAGATCACAGGAAAGATGGTGAAGGCTGTGGCTGTTCTTGGAAATAGCGAGTGTGTTGTTGGAACTATCTTTTTCTCCCAAGAAGGAGATGGTCCAACCACTGTTACGGGCGATGTTTCTGGTCTCAAGGCTGGGCTTCATGGATTCCATGTTCATGCCATGGGTGACACAACTAACGGCTGCATGTCAACTGGACCACATTTCAACCCTGCTGGAAAACAGCATGGTGCTCCCGAGGATGAGAATCGCCATGCTGGTGATTTAGGGAACATTACTGTTGGTGAAGATGGAAAGGCTAGCTTTACCATTACTGATAACCAGATTCCTCTCTCTGGACCTAACTCCATTATCGGAAGGGCTGTTGTAGTCCATGCTGACCCCGACGATCTTGGCAAGGGTGGACATGAACTCAGCTTATCTACTGGAAATGCTGGTGCTAGAGTAGCCTGTGGCATTATTGGGCTTCAAGGTTGA

Protein sequence

MVISKDGNVKLERSHGAHVTHPFKGCSEITGKMVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTGPHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSLSTGNAGARVACGIIGLQG
Homology
[Close]
BLAST of Csor.00g283420 vs. ExPASy Swiss-Prot
Match: O22373 (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum OX=4072 GN=SODCC PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.2e-73
Identity = 132/152 (86.84%), Postives = 141/152 (92.76%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVL +SECV GTI FSQ+GD PTTVTG+VSGLK GLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PH+NPAGK+HGAPEDENRHAGDLGNITVGEDG ASFTITD QIPL+GP SIIGR VVVHA
Sbjct: 61  PHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 185
           DPDDLGKGGHEL+ +TGNAG RVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELTKTTGNAGGRVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. ExPASy Swiss-Prot
Match: Q07796 (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2)

HSP 1 Score: 276.9 bits (707), Expect = 1.6e-73
Identity = 134/152 (88.16%), Postives = 141/152 (92.76%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVL +SE V GTIFFSQEGDGPTTVTG+VSGLK GLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNPAGK+HGAP D+NRHAGDLGNITVGEDG ASFTITD QIPL+G NS+IGRAVVVH 
Sbjct: 61  PHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHG 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 185
           DPDDLGKGGHELS STGNAG RVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. ExPASy Swiss-Prot
Match: P23345 (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays OX=4577 GN=SODCC.3 PE=2 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 2.3e-72
Identity = 130/152 (85.53%), Postives = 140/152 (92.11%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLG+SE V GTIFF+QEGDGPTTVTG VSGLK GLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PH+NPA K+HGAPEDENRHAGDLGN+T G DG A+  +TD+QIPL+GPNSIIGRAVVVHA
Sbjct: 61  PHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 185
           DPDDLGKGGHELS STGNAG RVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. ExPASy Swiss-Prot
Match: P27082 (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 SV=2)

HSP 1 Score: 272.3 bits (695), Expect = 4.0e-72
Identity = 131/152 (86.18%), Postives = 141/152 (92.76%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVL +SE V GTIFF+Q+GD PTTVTG+VSGLK GLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PH+NPAGK+HGAPEDE RHAGDLGNITVGEDG ASFT+TD QIPL+GP SIIGRAVVVHA
Sbjct: 61  PHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 185
           DPDDLGKGGHELS +TGNAG RVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. ExPASy Swiss-Prot
Match: P23346 (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays OX=4577 GN=SODCC.2 PE=2 SV=2)

HSP 1 Score: 270.0 bits (689), Expect = 2.0e-71
Identity = 128/152 (84.21%), Postives = 139/152 (91.45%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLG+S+ V GTIFF+QEGDGPT VTG VSGLK GLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PH+NPA K+HGAPEDENRHAGDLGN+T G DG A+  +TD+QIPL+GPNSIIGRAVVVHA
Sbjct: 61  PHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 185
           DPDDLGKGGHELS STGNAG RVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. NCBI nr
Match: KAG6590411.1 (Superoxide dismutase [Cu-Zn]-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378 bits (971), Expect = 1.87e-132
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MVISKDGNVKLERSHGAHVTHPFKGCSEITGKMVKAVAVLGNSECVVGTIFFSQEGDGPT 60
           MVISKDGNVKLERSHGAHVTHPFKGCSEITGKMVKAVAVLGNSECVVGTIFFSQEGDGPT
Sbjct: 1   MVISKDGNVKLERSHGAHVTHPFKGCSEITGKMVKAVAVLGNSECVVGTIFFSQEGDGPT 60

Query: 61  TVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTGPHFNPAGKQHGAPEDENRHAGDLGNITV 120
           TVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTGPHFNPAGKQHGAPEDENRHAGDLGNITV
Sbjct: 61  TVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTGPHFNPAGKQHGAPEDENRHAGDLGNITV 120

Query: 121 GEDGKASFTITDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSLSTGNAGARVACGII 180
           GEDGKASFTITDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSLSTGNAGARVACGII
Sbjct: 121 GEDGKASFTITDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSLSTGNAGARVACGII 180

Query: 181 GLQG 184
           GLQG
Sbjct: 181 GLQG 184

[Close]
BLAST of Csor.00g283420 vs. NCBI nr
Match: XP_022961402.1 (superoxide dismutase [Cu-Zn] isoform X1 [Cucurbita moschata] >XP_022961403.1 superoxide dismutase [Cu-Zn] isoform X1 [Cucurbita moschata] >XP_022961404.1 superoxide dismutase [Cu-Zn] isoform X1 [Cucurbita moschata] >XP_022968807.1 superoxide dismutase [Cu-Zn] [Cucurbita maxima] >XP_022968808.1 superoxide dismutase [Cu-Zn] [Cucurbita maxima] >XP_022968809.1 superoxide dismutase [Cu-Zn] [Cucurbita maxima] >KAG7023960.1 Superoxide dismutase [Cu-Zn] [Cucurbita argyrosperma subsp. argyrosperma] >AHF27437.1 superoxide dismutase [Cucurbita maxima])

HSP 1 Score: 311 bits (798), Expect = 1.46e-106
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 184
           DPDDLGKGGHELSLSTGNAGARVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. NCBI nr
Match: XP_023545334.1 (superoxide dismutase [Cu-Zn] [Cucurbita pepo subsp. pepo] >XP_023545336.1 superoxide dismutase [Cu-Zn] [Cucurbita pepo subsp. pepo] >XP_023545337.1 superoxide dismutase [Cu-Zn] [Cucurbita pepo subsp. pepo] >AWW05328.1 superoxide dismutase [Cu-Zn] 2 [Cucurbita pepo])

HSP 1 Score: 311 bits (797), Expect = 2.08e-106
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLGNSECV+GTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSECVIGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 184
           DPDDLGKGGHELSLSTGNAGARVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. NCBI nr
Match: AHF27434.1 (superoxide dismutase [Cucurbita moschata])

HSP 1 Score: 309 bits (791), Expect = 1.71e-105
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLGNS CVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSVCVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 184
           DPDDLGKGGHELSLSTGNAGARVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. NCBI nr
Match: XP_022158885.1 (superoxide dismutase [Cu-Zn] [Momordica charantia] >XP_022158886.1 superoxide dismutase [Cu-Zn] [Momordica charantia] >XP_022158887.1 superoxide dismutase [Cu-Zn] [Momordica charantia])

HSP 1 Score: 292 bits (747), Expect = 8.72e-99
Identity = 143/152 (94.08%), Postives = 147/152 (96.71%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLG S+ V GTIFFSQEGDGPTTVTG+VSGLKAGLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITD QIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 184
           DPDDLGKGGHELSL+TGNAG RVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLTTGNAGGRVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. ExPASy TrEMBL
Match: W0FVL0 (Superoxide dismutase [Cu-Zn] OS=Cucurbita maxima OX=3661 GN=Cu PE=2 SV=1)

HSP 1 Score: 311 bits (798), Expect = 7.09e-107
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 184
           DPDDLGKGGHELSLSTGNAGARVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. ExPASy TrEMBL
Match: A0A6J1HA41 (Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=LOC111461986 PE=3 SV=1)

HSP 1 Score: 311 bits (798), Expect = 7.09e-107
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 184
           DPDDLGKGGHELSLSTGNAGARVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. ExPASy TrEMBL
Match: A0A2Z4GT65 (Superoxide dismutase [Cu-Zn] OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 311 bits (797), Expect = 1.01e-106
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLGNSECV+GTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSECVIGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 184
           DPDDLGKGGHELSLSTGNAGARVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. ExPASy TrEMBL
Match: W0FW16 (Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=Cu PE=2 SV=1)

HSP 1 Score: 309 bits (791), Expect = 8.28e-106
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLGNS CVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSVCVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 184
           DPDDLGKGGHELSLSTGNAGARVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. ExPASy TrEMBL
Match: A0A6J1DX40 (Superoxide dismutase [Cu-Zn] OS=Momordica charantia OX=3673 GN=LOC111025346 PE=3 SV=1)

HSP 1 Score: 292 bits (747), Expect = 4.22e-99
Identity = 143/152 (94.08%), Postives = 147/152 (96.71%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           MVKAVAVLG S+ V GTIFFSQEGDGPTTVTG+VSGLKAGLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITD QIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 184
           DPDDLGKGGHELSL+TGNAG RVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLTTGNAGGRVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. TAIR 10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 268.1 bits (684), Expect = 5.3e-72
Identity = 129/152 (84.87%), Postives = 138/152 (90.79%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           M K VAVL +SE V GTIFF+QEGDG TTV+G VSGLK GLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNP GK HGAPED NRHAGDLGNITVG+DG A+FTITD QIPL+GPNSI+GRAVVVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 185
           DPDDLGKGGHELSL+TGNAG RVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. TAIR 10
Match: AT1G08830.2 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 268.1 bits (684), Expect = 5.3e-72
Identity = 129/152 (84.87%), Postives = 138/152 (90.79%), Query Frame = 0 

Query: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92
           M K VAVL +SE V GTIFF+QEGDG TTV+G VSGLK GLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152
           PHFNP GK HGAPED NRHAGDLGNITVG+DG A+FTITD QIPL+GPNSI+GRAVVVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 153 DPDDLGKGGHELSLSTGNAGARVACGIIGLQG 185
           DPDDLGKGGHELSL+TGNAG RVACGIIGLQG
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACGIIGLQG 152

[Close]
BLAST of Csor.00g283420 vs. TAIR 10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2 )

HSP 1 Score: 204.5 bits (519), Expect = 7.2e-53
Identity = 98/148 (66.22%), Postives = 112/148 (75.68%), Query Frame = 0 

Query: 35  KAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTGPH 94
           KAVAVL  +  V G +  +Q+  GPTTV   ++GL  G HGFH+H  GDTTNGC+STGPH
Sbjct: 66  KAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPH 125

Query: 95  FNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHADP 154
           FNP    HGAPEDE RHAGDLGNI    DG A  TI DNQIPL+GPNS++GRA VVH   
Sbjct: 126 FNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELK 185

Query: 155 DDLGKGGHELSLSTGNAGARVACGIIGL 183
           DDLGKGGHELSL+TGNAG R+ACG+IGL
Sbjct: 186 DDLGKGGHELSLTTGNAGGRLACGVIGL 213

[Close]
BLAST of Csor.00g283420 vs. TAIR 10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 201.4 bits (511), Expect = 6.1e-52
Identity = 96/150 (64.00%), Postives = 112/150 (74.67%), Query Frame = 0 

Query: 34  VKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTGP 93
           ++AVA++     V G + F Q+  G T VTG +SGL  G HGFH+H+ GDTTNGC+STGP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 94  HFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHAD 153
           HFNP  + HG P +E RHAGDLGNI  G +G A   I D  IPLSG  SI+GRAVVVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

Query: 154 PDDLGKGGHELSLSTGNAGARVACGIIGLQ 184
           PDDLGKGGH+LS STGNAG+RV CGIIGLQ
Sbjct: 128 PDDLGKGGHKLSKSTGNAGSRVGCGIIGLQ 157

[Close]
BLAST of Csor.00g283420 vs. TAIR 10
Match: AT5G18100.2 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-40
Identity = 77/127 (60.63%), Postives = 91/127 (71.65%), Query Frame = 0 

Query: 34  VKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTGP 93
           ++AVA++     V G + F Q+  G T VTG +SGL  G HGFH+H+ GDTTNGC+STGP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 94  HFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHAD 153
           HFNP  + HG P +E RHAGDLGNI  G +G A   I D  IPLSG  SI+GRAVVVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

Query: 154 PDDLGKG 161
           PDDLGKG
Sbjct: 128 PDDLGKG 134

The following BLAST results are available for this feature:
BLAST of Csor.00g283420 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O223731.2e-7386.84Superoxide dismutase [Cu-Zn] OS=Capsicum annuum OX=4072 GN=SODCC PE=2 SV=1[more]
Q077961.6e-7388.16Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2[more]
P233452.3e-7285.53Superoxide dismutase [Cu-Zn] 4A OS=Zea mays OX=4577 GN=SODCC.3 PE=2 SV=2[more]
P270824.0e-7286.18Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 ... [more]
P233462.0e-7184.21Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays OX=4577 GN=SODCC.2 PE=2 SV=2[more]
BLAST of Csor.00g283420 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6590411.11.87e-132100.00Superoxide dismutase [Cu-Zn]-like protein, partial [Cucurbita argyrosperma subsp... [more]
XP_022961402.11.46e-106100.00superoxide dismutase [Cu-Zn] isoform X1 [Cucurbita moschata] >XP_022961403.1 sup... [more]
XP_023545334.12.08e-10699.34superoxide dismutase [Cu-Zn] [Cucurbita pepo subsp. pepo] >XP_023545336.1 supero... [more]
AHF27434.11.71e-10599.34superoxide dismutase [Cucurbita moschata][more]
XP_022158885.18.72e-9994.08superoxide dismutase [Cu-Zn] [Momordica charantia] >XP_022158886.1 superoxide di... [more]
BLAST of Csor.00g283420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
W0FVL07.09e-107100.00Superoxide dismutase [Cu-Zn] OS=Cucurbita maxima OX=3661 GN=Cu PE=2 SV=1[more]
A0A6J1HA417.09e-107100.00Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=LOC111461986 PE=3 ... [more]
A0A2Z4GT651.01e-10699.34Superoxide dismutase [Cu-Zn] OS=Cucurbita pepo OX=3663 PE=2 SV=1[more]
W0FW168.28e-10699.34Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=Cu PE=2 SV=1[more]
A0A6J1DX404.22e-9994.08Superoxide dismutase [Cu-Zn] OS=Momordica charantia OX=3673 GN=LOC111025346 PE=3... [more]
BLAST of Csor.00g283420 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08830.15.3e-7284.87copper/zinc superoxide dismutase 1 [more]
AT1G08830.25.3e-7284.87copper/zinc superoxide dismutase 1 [more]
AT2G28190.17.2e-5366.22copper/zinc superoxide dismutase 2 [more]
AT5G18100.16.1e-5264.00copper/zinc superoxide dismutase 3 [more]
AT5G18100.21.8e-4060.63copper/zinc superoxide dismutase 3 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001424Superoxide dismutase, copper/zinc binding domainPRINTSPR00068CUZNDISMTASEcoord: 75..97
score: 79.25
coord: 111..120
score: 75.15
coord: 155..181
score: 74.91
coord: 130..152
score: 66.74
IPR001424Superoxide dismutase, copper/zinc binding domainPFAMPF00080Sod_Cucoord: 44..180
e-value: 3.4E-49
score: 166.6
IPR001424Superoxide dismutase, copper/zinc binding domainCDDcd00305Cu-Zn_Superoxide_Dismutasecoord: 34..177
e-value: 1.45765E-62
score: 188.238
IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamilyGENE3D2.60.40.200Superoxide dismutase, copper/zinc binding domaincoord: 31..184
e-value: 7.7E-68
score: 229.5
IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamilySUPERFAMILY49329Cu,Zn superoxide dismutase-likecoord: 33..182
NoneNo IPR availablePANTHERPTHR10003:SF83SUPEROXIDE DISMUTASE [CU-ZN] 2coord: 22..184
IPR024134Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperonePANTHERPTHR10003SUPEROXIDE DISMUTASE CU-ZN -RELATEDcoord: 22..184
IPR018152Superoxide dismutase, copper/zinc, binding sitePROSITEPS00332SOD_CU_ZN_2coord: 169..180
IPR018152Superoxide dismutase, copper/zinc, binding sitePROSITEPS00087SOD_CU_ZN_1coord: 75..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g283420.m01Csor.00g283420.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0006801 superoxide metabolic process
molecular_function GO:0005507 copper ion binding
molecular_function GO:0004784 superoxide dismutase activity
molecular_function GO:0046872 metal ion binding