Csor.00g282950 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g282950
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2
Location	Csor_Chr16: 171211 .. 173021 (-)
RNA-Seq Expression	Csor.00g282950
Synteny	Csor.00g282950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACAATTCCATCACTCTCCTTTGCTTCACCTGTAATCACTCCCTCCTTTTCTTTCTCCGTTTGGTTCTTTGGCAAATAATGGCTGAAATATCTGCGTTATGCTTTTGCTCTTTTTTATCTTTAGCATCTTTTCCAAAGCACATTAAATTTTGCTTAATGTTGGCCATTTTTTCTAGTTACAGAGGATAGAGGTGAGGGTTGGAATTTCTCATGGATTTAACTCTCCTCCCCGGCTACAGGTTAAGATTCGACAGATTCTTTCAACAACGAAGCTACCCATGCTCTTCTCGCCCTTCATTCTTCACGTTTTCTTGTTTTAGTTTTCAGGTGGCCGCCAGAAAGCAGGGAAATGGTGAAGCTGTCGGGCCGCGAGTGTGGCGACGAAGAAAATTGGTATCTTAATTTCTCCCTCACCATTTCTTAATTTCTTTTGTCTCATTCATGTCACTCTCTCAAACTGCACCAGTCCAACTCACAATTTAAAAACAAAATCGATGGAAGCATCCAAATTTCCTAACTTGACCTAAAGTTTCTTTAAAGAAACCAAGTTTGTGTAATGATATGCCGTATATTGCAACTGCCTAAAGCACTGGGAGCAGGAATTTCTATCTTTCGTGTCGTCTTTTACCCTTCTTTTGTGGTATAAAAAAGAGAGATTTTGTCGTATAAAAAAGAAGGATTGTAAGCGCCACCTTGTGGTTAGTGTTTCTTTGCTATTAGTATTGATTGGGAACCACAGTTTACAACACAGATTTGTAAACGTTGGAAAAAACAAACATGGGTTATTCGGTGCTTTTGTGACGAAAATTGGAGATGTTTGCTTGTTCTAGCTGCTGCTTTGATTAATGCAACCGAATACATGGTGTTCTATGATAACTATCTAAATGTGGATGTGTCAGAAATGATCCCACTTTTTAATCCATCGAACTTTTGTGATTAATGATGATTAGGACACGAGCACAATGGGTAGTTAAAAACACTCAAAAGAGTATGTGGAGTTGTGGGTTCATGGTGGTATTCAAATCCTACAAGTTTCTTAGTCATCATATATGTTGAACAGGCAGTTGTGTAGATGAAATTAGGCGAGATGTGTATTGGCTCATGTACTTCTAAGGAAAATAATGGTATGAACTGTACACTCAGTATAGGATTAGGTGGAGTGGAGGATAGATTGAGATGATTAATCACTTTAACACATGCGGATTATACTGCTTGCGATTATTGGGATGCGAAGTAAGTAACGTCGCCATGAGAGCTTATCCTCAAAGTGGACAATATCATCTATTGCGGAGAGTCGTGTAGTTTCTCGAAACAAATAGAATATTGAGATGGTTTTGGACTACAGGAGCTGGCTCACATTATTTCTTTTTTAACTTGAAGCCTGAAATCGTTTATGATGAATGATTCTGACTAAAATTCTACCTGTTGTTCTCATTGACATTGAAACATTGAATTTGATTCATTGTGCAGACGAAGAAGGATGAGATGTCGATCTTCAAAATGGATCGAATTCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATCGAAAGACTTCTATTATCAGAGGACAACCGCTTCGATTTTGTGAATGAGGTTGCAGCGGAGGCTAAGGAATACGTGGAGAACAATCGTGACGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTCTATCGGCCGGATGCATATGCAGAAGAGGACCCATTTAAACCCGGACCTCATTACCTCAAACAAGAATTTACTTGA

mRNA sequence

ATGACTACAATTCCATCACTCTCCTTTGCTTCACCTAGGATAGAGGTGAGGGTTGGAATTTCTCATGGATTTAACTCTCCTCCCCGGCTACAGGTGGCCGCCAGAAAGCAGGGAAATGGTGAAGCTGTCGGGCCGCGAGTGTGGCGACGAAGAAAATTGACGAAGAAGGATGAGATGTCGATCTTCAAAATGGATCGAATTCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATCGAAAGACTTCTATTATCAGAGGACAACCGCTTCGATTTTGTGAATGAGGTTGCAGCGGAGGCTAAGGAATACGTGGAGAACAATCGTGACGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTCTATCGGCCGGATGCATATGCAGAAGAGGACCCATTTAAACCCGGACCTCATTACCTCAAACAAGAATTTACTTGA

Coding sequence (CDS)

ATGACTACAATTCCATCACTCTCCTTTGCTTCACCTAGGATAGAGGTGAGGGTTGGAATTTCTCATGGATTTAACTCTCCTCCCCGGCTACAGGTGGCCGCCAGAAAGCAGGGAAATGGTGAAGCTGTCGGGCCGCGAGTGTGGCGACGAAGAAAATTGACGAAGAAGGATGAGATGTCGATCTTCAAAATGGATCGAATTCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATCGAAAGACTTCTATTATCAGAGGACAACCGCTTCGATTTTGTGAATGAGGTTGCAGCGGAGGCTAAGGAATACGTGGAGAACAATCGTGACGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTCTATCGGCCGGATGCATATGCAGAAGAGGACCCATTTAAACCCGGACCTCATTACCTCAAACAAGAATTTACTTGA

Protein sequence

MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT

Homology

[Close]

BLAST of Csor.00g282950 vs. ExPASy Swiss-Prot
Match: Q8VZV9 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-45
Identity = 88/121 (72.73%), Postives = 103/121 (85.12%), Query Frame = 0


Query: 44  GPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVN 103
           G RVWRRR LTKKD+M  +KM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN
Sbjct: 41  GRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVMTMDIEQLLLREDNRFEFVN 100

Query: 104 EVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEF 163
            VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+AY E DP+KPGP YL + +
Sbjct: 101 SVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLEYY 160

Query: 164 T 165
           T
Sbjct: 161 T 161

[Close]

BLAST of Csor.00g282950 vs. NCBI nr
Match: KAG6576645.1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 329 bits (844), Expect = 9.54e-114
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMS 60
           MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMS
Sbjct: 1   MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMS 60

Query: 61  IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY 120
           IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY
Sbjct: 61  IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY 120

Query: 121 GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164
           GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164

[Close]

BLAST of Csor.00g282950 vs. NCBI nr
Match: XP_023553435.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324 bits (831), Expect = 9.16e-112
Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMS 60
           MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKDEMS
Sbjct: 1   MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEGVGRRVWRRRKLTKKDEMS 60

Query: 61  IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY 120
           IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY
Sbjct: 61  IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY 120

Query: 121 GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164
           GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164

[Close]

BLAST of Csor.00g282950 vs. NCBI nr
Match: XP_022923083.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 322 bits (826), Expect = 5.30e-111
Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMS 60
           MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKDEMS
Sbjct: 1   MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEGVGRRVWRRRKLTKKDEMS 60

Query: 61  IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY 120
           IFKM+RIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY
Sbjct: 61  IFKMNRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY 120

Query: 121 GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164
           GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164

[Close]

BLAST of Csor.00g282950 vs. NCBI nr
Match: XP_023553434.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319 bits (817), Expect = 1.39e-109
Identity = 162/167 (97.01%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MTTIPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKD 60
           MTTIPSLSFASP   RIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKD
Sbjct: 1   MTTIPSLSFASPLLQRIEVRVGISHGFNSPPRLQVAARKQGNGEGVGRRVWRRRKLTKKD 60

Query: 61  EMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNR 120
           EMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNR
Sbjct: 61  EMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNR 120

Query: 121 DEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164
           DEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 DEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 167

[Close]

BLAST of Csor.00g282950 vs. NCBI nr
Match: XP_022923082.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 317 bits (812), Expect = 8.04e-109
Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MTTIPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKD 60
           MTTIPSLSFASP   RIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKD
Sbjct: 1   MTTIPSLSFASPLLQRIEVRVGISHGFNSPPRLQVAARKQGNGEGVGRRVWRRRKLTKKD 60

Query: 61  EMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNR 120
           EMSIFKM+RIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNR
Sbjct: 61  EMSIFKMNRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNR 120

Query: 121 DEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164
           DEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 DEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 167

[Close]

BLAST of Csor.00g282950 vs. ExPASy TrEMBL
Match: A0A6J1E8L6 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430858 PE=4 SV=1)

HSP 1 Score: 322 bits (826), Expect = 2.57e-111
Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMS 60
           MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKDEMS
Sbjct: 1   MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEGVGRRVWRRRKLTKKDEMS 60

Query: 61  IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY 120
           IFKM+RIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY
Sbjct: 61  IFKMNRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY 120

Query: 121 GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164
           GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164

[Close]

BLAST of Csor.00g282950 vs. ExPASy TrEMBL
Match: A0A6J1E563 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430858 PE=4 SV=1)

HSP 1 Score: 317 bits (812), Expect = 3.89e-109
Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MTTIPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKD 60
           MTTIPSLSFASP   RIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKD
Sbjct: 1   MTTIPSLSFASPLLQRIEVRVGISHGFNSPPRLQVAARKQGNGEGVGRRVWRRRKLTKKD 60

Query: 61  EMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNR 120
           EMSIFKM+RIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNR
Sbjct: 61  EMSIFKMNRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNR 120

Query: 121 DEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164
           DEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 DEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 167

[Close]

BLAST of Csor.00g282950 vs. ExPASy TrEMBL
Match: A0A6J1J2D6 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482787 PE=4 SV=1)

HSP 1 Score: 306 bits (783), Expect = 9.59e-105
Identity = 152/161 (94.41%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 4   IPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFK 63
           IP+LSFASPRI+ R GISHGFN PPRLQVAARKQ +GE VG RVWRRRKLTKKDEMSIFK
Sbjct: 5   IPTLSFASPRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKKDEMSIFK 64

Query: 64  MDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGS 123
           MDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGS
Sbjct: 65  MDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGS 124

Query: 124 KKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164
           KKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 125 KKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]

BLAST of Csor.00g282950 vs. ExPASy TrEMBL
Match: A0A6J1E8L1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430856 PE=4 SV=1)

HSP 1 Score: 302 bits (774), Expect = 2.26e-103
Identity = 150/163 (92.02%), Postives = 155/163 (95.09%), Query Frame = 0


Query: 2   TTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSI 61
           T IP+LSFASPRI+ R G+SHGFN P RLQVAARKQ +GE VG RVWRRRKLTKKD+MSI
Sbjct: 3   TPIPTLSFASPRIQTRAGLSHGFNFPSRLQVAARKQRDGEGVGRRVWRRRKLTKKDDMSI 62

Query: 62  FKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYG 121
           FKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYG
Sbjct: 63  FKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYG 122

Query: 122 GSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164
           GSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 123 GSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]

BLAST of Csor.00g282950 vs. ExPASy TrEMBL
Match: A0A6J1J5H1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482787 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 1.45e-102
Identity = 152/164 (92.68%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 4   IPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMS 63
           IP+LSFASP   RI+ R GISHGFN PPRLQVAARKQ +GE VG RVWRRRKLTKKDEMS
Sbjct: 5   IPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKKDEMS 64

Query: 64  IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY 123
           IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY
Sbjct: 65  IFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEY 124

Query: 124 GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 164
           GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 125 GGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 168

[Close]

BLAST of Csor.00g282950 vs. TAIR 10
Match: AT5G24314.1 (plastid transcriptionally active7 )

HSP 1 Score: 184.1 bits (466), Expect = 9.0e-47
Identity = 88/121 (72.73%), Postives = 103/121 (85.12%), Query Frame = 0


Query: 44  GPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVN 103
           G RVWRRR LTKKD+M  +KM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN
Sbjct: 41  GRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVMTMDIEQLLLREDNRFEFVN 100

Query: 104 EVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEF 163
            VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+AY E DP+KPGP YL + +
Sbjct: 101 SVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLEYY 160

Query: 164 T 165
           T
Sbjct: 161 T 161

[Close]

BLAST of Csor.00g282950 vs. TAIR 10
Match: AT5G24314.2 (plastid transcriptionally active7 )

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-44
Identity = 88/129 (68.22%), Postives = 103/129 (79.84%), Query Frame = 0


Query: 44  GPRVWRRRK--------LTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSE 103
           G RVWRRR         LTKKD+M  +KM R+PF+EEQVRK++E GK++TMDIE+LLL E
Sbjct: 41  GRRVWRRRTLVSTKLDILTKKDDMLRYKMQRVPFVEEQVRKIREVGKVMTMDIEQLLLRE 100

Query: 104 DNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPG 163
           DNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+AY E DP+KPG
Sbjct: 101 DNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPG 160

Query: 164 PHYLKQEFT 165
           P YL + +T
Sbjct: 161 PGYLLEYYT 169

The following BLAST results are available for this feature:

BLAST of Csor.00g282950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZV9	1.3e-45	72.73	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PT...	[more]

BLAST of Csor.00g282950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576645.1	9.54e-114	100.00	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7, partial [Cucurbita argyrosperma subs...	[more]
XP_023553435.1	9.16e-112	98.78	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita pepo subsp...	[more]
XP_022923083.1	5.30e-111	98.17	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita moschata]	[more]
XP_023553434.1	1.39e-109	97.01	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita pepo subsp...	[more]
XP_022923082.1	8.04e-109	96.41	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Csor.00g282950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E8L6	2.57e-111	98.17	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1E563	3.89e-109	96.41	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1J2D6	9.59e-105	94.41	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 OS=Cucurbita maxima O...	[more]
A0A6J1E8L1	2.26e-103	92.02	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1J5H1	1.45e-102	92.68	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 OS=Cucurbita maxima O...	[more]

BLAST of Csor.00g282950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24314.1	9.0e-47	72.73	plastid transcriptionally active7	[more]
AT5G24314.2	1.4e-44	68.22	plastid transcriptionally active7	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038958	Protein plastid transcriptionally active 7	PANTHER	PTHR37257	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 7	coord: 30..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g282950.m01	Csor.00g282950.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042793	plastid transcription
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex
molecular_function	GO:0003723	RNA binding