Csor.00g282840 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g282840
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr16: 227079 .. 229719 (+)
RNA-Seq ExpressionCsor.00g282840
SyntenyCsor.00g282840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGCAAATGGGCGTGATTAAAGGGACTGCGCTTAAAGGGACTGCGCTTAAAGGGACTGCGCTTAAAGGGACTGCGCTTAAAGGGACTGCTAAGGGCTGCTCATCCACACAAGCCTTCTATACAGTGTGTGGTAAGCACCGCAGGACCAAGTCAGAGATCGGTCCGGTCCGGTCCAAACAAAAAATGAATTATATTGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCCATTGATGTCCTAGGTTATAAATTAGTAATTTTAATACTCTTGTAAATATATGGAAATGGGCCTGGCCCTTTAGTTAGCTCGATGAGAAGAAGGTCCAGAAAAAGGGGCGTATTCAGCGTTTTGGCAAAGTCGCACAATCCCAACTATGATTATTTTTATATAAAATAAAACTTGAATGCTTTTTTTTATTTGTCGTCTTTTATATGAAATTATTTATGTGACATGGGTAATCAATTAAAGCATTAGTTACACACAAATAATTGCACCCCGCTGTGATCTAAAGGTCTCAATTAATCCGGAGGGAAAAAAGCATACAATAAAATAATAATAATGAATATTTCCTCCTTATCAACAAGCATGTTGCATTTTGTCCTAACATTCCTCAAAAGAACAAACATACAAAAATAAATAAATAAATAAATAAATAAAACCTTATTCTCACGACCCAACTTCTAGAACTAAAAGATTATTTTACAAAAATACACCCGTGTAACACGCGACCAAAAGAACTAATAAAATTATAAAATTGAGATTTAATTAAAAAAAATTATTATGTTAATGTTGAGGTTTGAATTAATTTTACTAAACCCCACGTAATCTCCAAAGTAATAAAATTAGTAGGGTTTTAGAAGCAAGAAGGGGTAAAATTAATGTTAAGTGGGGGGCAAACCAAAGCATGGAAAGATTTGAATATGGCCCCCATCTTCATGTTTATCATTATAATCATTTCTACTCCTTTGTAAAAAGAAAAAAATAATTTGATACAAATTTCACCCACTGTTTACCATTCACGCGTTTAGCTTTAAATTAATAATTATTTTCTTCAAAATTCTCTCCTTTGAAAATATAAGATGCATAAAATCATTGTCCCCTTCTATATCTTATATTAGCCGTTAAAATCATGTATGGGATATCACATTATTTGACTGCTTCCTCCATGTCACTTTAATAATGAAAGATATTCCAAATTTGTATTATTTTATTATTATTATTATTATTATTTTTTTATGACGATTGAATAACTACTCTACTAAAATTTTGCTTATCTACCCTACATCAAATATTTTTATTTTTTTGTAACCATCTTAAAAATAAGATTGTCCGATATCCTATTTTTATGTTGAGTGTGTTGACCTCACCAAAAAGTTTCCACTCAACTTTTTTTTTAATTTTAAAAAATTCAACTCAATTTGGATGGAAAATAAAATCTAACTTAATTGAATTATTTGCATCAATGAATTAGGGTTTATGAGGGGAAACTATTTTGTGGGTCTTCTTTTTTCTAAAAGCCCTAATCCTGTCTTGGATTTTATGTATCTATTTCATTTCATTTTAACTTTTGAGTAATGTCATTTGGAATTGTTTGATTGGACCCTTTGATTTGGCTATTTATGCACCACCTTTTATAATATTATTATTATTTCATTTTTCATTTACAAGTAATTAAGATTTTAAAATGATTTAAACTAGGTTTTTTCCGACCATTTTAAAATTACTCTAAATCATATTTTTAACAATTCCAAACCAAATTTGATGATATAAATTTTTTTTTATACTAAATTTGAAAATAATAAATAATTTTTAATCATTTTAAAATCACTCTCAAACACATAATTTAACACCAAAATATTATATTACTTTTTTTAATATAAATAATCTAGAATATAGCGAAAAAAAATATATAATATAATATAATATATATATTGTGCAGCTTTCAATGAAAATAAGACACATGCACATAATCACAAACTCAAAAAAATAAAAAAAATCAACGGTGGCTTCTCCTTGTGTCCAAGATTCAAAGTCCCATCCCACAGTGAATTGTAATGGAATAAGTAATAGTATTGATTTTAATCTTTATTTAATTCAAAAGGTCTTATCATTGTAATTAACATTCCAACTTTTTTTTTTTTTTTTCTCTCTTTTTTAACTAAGTTGGAAGCAGAATCATATGACATACAAAAAATATAAACTTGTACGTTAATAAACATAAACAATATTCTAAATAATATTACGTAGGTAGGTCTAATTTGATGCGAGGATGGTTGAAAGTAAAATGGTGTATGTTTGGGTGACACTGACACACAAGGGAGGCATGCATGGTGATAGGAGCAGAGGGTGAGGGTTAGAGGCATGCATGGTGCGTTTGTATTGTATCGTATTGTTGGATAGCGTCATGTTGTCCCGCCATACAACACCATTCGCCCATTCCTCTCCGCCGGCTGGAAGCGTTATTGTTGTTATTTGTGCTGTTTGTTTCAACAAGCTTAGATTAGACCTCTCGCAAGCTGTTGGATGGGCCTCTCCATCCAATGGTTTGGTGGCACCTCTCCTTGCGTTTCCAAAGTGGAAATCAAACGCATTTGTTTGA

mRNA sequence

ATGTGGCAAATGGGCGTGATTAAAGGGACTGCGCTTAAAGGGACTGCGCTTAAAGGGACTGCGCTTAAAGGGACTGCGCTTAAAGGGACTGCTAAGGGCTGCTCATCCACACAAGCCTTCTATACAGTGTGTGGTAAGCACCGCAGGACCAACGTCATGTTGTCCCGCCATACAACACCATTCGCCCATTCCTCTCCGCCGGCTGGAAGCGTTATTGTTGTTATTTGTGCTGTTTGTTTCAACAAGCTTAGATTAGACCTCTCGCAAGCTGTTGGATGGGCCTCTCCATCCAATGGTTTGGTGGCACCTCTCCTTGCGTTTCCAAAGTGGAAATCAAACGCATTTGTTTGA

Coding sequence (CDS)

ATGTGGCAAATGGGCGTGATTAAAGGGACTGCGCTTAAAGGGACTGCGCTTAAAGGGACTGCGCTTAAAGGGACTGCGCTTAAAGGGACTGCTAAGGGCTGCTCATCCACACAAGCCTTCTATACAGTGTGTGGTAAGCACCGCAGGACCAACGTCATGTTGTCCCGCCATACAACACCATTCGCCCATTCCTCTCCGCCGGCTGGAAGCGTTATTGTTGTTATTTGTGCTGTTTGTTTCAACAAGCTTAGATTAGACCTCTCGCAAGCTGTTGGATGGGCCTCTCCATCCAATGGTTTGGTGGCACCTCTCCTTGCGTTTCCAAAGTGGAAATCAAACGCATTTGTTTGA

Protein sequence

MWQMGVIKGTALKGTALKGTALKGTALKGTAKGCSSTQAFYTVCGKHRRTNVMLSRHTTPFAHSSPPAGSVIVVICAVCFNKLRLDLSQAVGWASPSNGLVAPLLAFPKWKSNAFV
Homology
[Close]
BLAST of Csor.00g282840 vs. NCBI nr
Match: KAG6576656.1 (hypothetical protein SDJN03_24230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239 bits (609), Expect = 1.82e-79
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MWQMGVIKGTALKGTALKGTALKGTALKGTAKGCSSTQAFYTVCGKHRRTNVMLSRHTTP 60
           MWQMGVIKGTALKGTALKGTALKGTALKGTAKGCSSTQAFYTVCGKHRRTNVMLSRHTTP
Sbjct: 1   MWQMGVIKGTALKGTALKGTALKGTALKGTAKGCSSTQAFYTVCGKHRRTNVMLSRHTTP 60

Query: 61  FAHSSPPAGSVIVVICAVCFNKLRLDLSQAVGWASPSNGLVAPLLAFPKWKSNAFV 116
           FAHSSPPAGSVIVVICAVCFNKLRLDLSQAVGWASPSNGLVAPLLAFPKWKSNAFV
Sbjct: 61  FAHSSPPAGSVIVVICAVCFNKLRLDLSQAVGWASPSNGLVAPLLAFPKWKSNAFV 116

The following BLAST results are available for this feature:
BLAST of Csor.00g282840 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g282840 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6576656.11.82e-79100.00hypothetical protein SDJN03_24230, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g282840 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g282840 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g282840.m01Csor.00g282840.m01mRNA