Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCCTTAAGTATGCAGCAAGAATTATTGTTGGATTCTGATACTGGACATGATAGCCTTGATGAAGATGAAAAAGAAGATAACATTGTGAATGCAGATGATGGAGCTCTCGCTGATAATTCAGGTAATCAAGAGGAATCTTCTTCATATACAGAAAATGATGTTGAATTCTCATCCAGCATTAGCAATAATGATGTCAATAATGTTGCTTCCTTGCAAGAAGATTTTCGATCTGATTCCTCATTAGGTGCTACATTAGTTGCTCCCAGAAGTTTGTGTTCCTCGATCTTACCCGAATTTGAGATTGATGCTAAAGTAGCTTCTTGTTTTAAAGATGTTAACGACTGTCATGAACCTGAAATGAATATATTAAAAGATGAATGA
mRNA sequence
ATGGAGGCCTTAAGTATGCAGCAAGAATTATTGTTGGATTCTGATACTGGACATGATAGCCTTGATGAAGATGAAAAAGAAGATAACATTGTGAATGCAGATGATGGAGCTCTCGCTGATAATTCAGGTAATCAAGAGGAATCTTCTTCATATACAGAAAATGATGTTGAATTCTCATCCAGCATTAGCAATAATGATGTCAATAATGTTGCTTCCTTGCAAGAAGATTTTCGATCTGATTCCTCATTAGGTGCTACATTAGTTGCTCCCAGAAGTTTGTGTTCCTCGATCTTACCCGAATTTGAGATTGATGCTAAAGTAGCTTCTTGTTTTAAAGATGTTAACGACTGTCATGAACCTGAAATGAATATATTAAAAGATGAATGA
Coding sequence (CDS)
ATGGAGGCCTTAAGTATGCAGCAAGAATTATTGTTGGATTCTGATACTGGACATGATAGCCTTGATGAAGATGAAAAAGAAGATAACATTGTGAATGCAGATGATGGAGCTCTCGCTGATAATTCAGGTAATCAAGAGGAATCTTCTTCATATACAGAAAATGATGTTGAATTCTCATCCAGCATTAGCAATAATGATGTCAATAATGTTGCTTCCTTGCAAGAAGATTTTCGATCTGATTCCTCATTAGGTGCTACATTAGTTGCTCCCAGAAGTTTGTGTTCCTCGATCTTACCCGAATTTGAGATTGATGCTAAAGTAGCTTCTTGTTTTAAAGATGTTAACGACTGTCATGAACCTGAAATGAATATATTAAAAGATGAATGA
Protein sequence
MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTENDVEFSSSISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEFEIDAKVASCFKDVNDCHEPEMNILKDE
Homology
BLAST of Csor.00g282210 vs. NCBI nr
Match:
KAG6576719.1 (hypothetical protein SDJN03_24293, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 238 bits (606), Expect = 1.27e-78
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
Query: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTENDVEFSS 60
MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTENDVEFSS
Sbjct: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTENDVEFSS 60
Query: 61 SISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEFEIDAKVASCFKDVNDCHEP 120
SISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEFEIDAKVASCFKDVNDCHEP
Sbjct: 61 SISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEFEIDAKVASCFKDVNDCHEP 120
Query: 121 EMNILKDE 128
EMNILKDE
Sbjct: 121 EMNILKDE 128
BLAST of Csor.00g282210 vs. NCBI nr
Match:
KAA0033665.1 (putative oxidoreductase/transition metal ion-binding protein [Cucumis melo var. makuwa] >TYK22963.1 putative oxidoreductase/transition metal ion-binding protein [Cucumis melo var. makuwa])
HSP 1 Score: 141 bits (355), Expect = 6.27e-36
Identity = 94/155 (60.65%), Postives = 103/155 (66.45%), Query Frame = 0
Query: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTEN------ 60
MEALS QQELLLDS+TG D L EDEKEDN V+ADD LA +GNQE+SSS TEN
Sbjct: 137 MEALSTQQELLLDSETGTDRLGEDEKEDNSVDADDETLAGKAGNQEDSSSCTENEETLNK 196
Query: 61 -------DVE------FSSSISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEF 120
DVE SS SNNDV+N ASLQEDF+SDSSL T VAP SL S I PE
Sbjct: 197 NRVGDGVDVEELAENYVESSSSNNDVHNFASLQEDFQSDSSLTVTAVAPGSLSSPISPES 256
Query: 121 EIDAKVASCFKDVNDCH--------EPEMNILKDE 128
E D+ VASC KDVN+CH EPEMN+LKDE
Sbjct: 257 EFDSNVASCLKDVNNCHPGLEVSTSEPEMNVLKDE 291
BLAST of Csor.00g282210 vs. NCBI nr
Match:
XP_011651165.1 (uncharacterized protein LOC101215442 isoform X2 [Cucumis sativus])
HSP 1 Score: 140 bits (352), Expect = 1.67e-35
Identity = 95/155 (61.29%), Postives = 102/155 (65.81%), Query Frame = 0
Query: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTEN------ 60
MEALS QQELLLDS+TG D L EDEKED V+ADD LA +GNQE+SSSYTEN
Sbjct: 88 MEALSTQQELLLDSETGTDRLGEDEKEDTSVDADDETLAGKAGNQEDSSSYTENEETLNK 147
Query: 61 -------DVE------FSSSISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEF 120
DVE SS SNNDV+NVASLQEDF+SDSSL T VAP SL S I PE
Sbjct: 148 NRVGDGVDVEELAENHVESSSSNNDVHNVASLQEDFQSDSSLNVTSVAPGSLSSLISPES 207
Query: 121 EIDAKVASCFKDVNDCH--------EPEMNILKDE 128
E D VASC KDVN+ H EPEMNILKDE
Sbjct: 208 EFDTNVASCLKDVNNYHPGLEVSTSEPEMNILKDE 242
BLAST of Csor.00g282210 vs. NCBI nr
Match:
XP_011651163.1 (uncharacterized protein LOC101215442 isoform X1 [Cucumis sativus])
HSP 1 Score: 140 bits (352), Expect = 1.68e-35
Identity = 95/155 (61.29%), Postives = 102/155 (65.81%), Query Frame = 0
Query: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTEN------ 60
MEALS QQELLLDS+TG D L EDEKED V+ADD LA +GNQE+SSSYTEN
Sbjct: 137 MEALSTQQELLLDSETGTDRLGEDEKEDTSVDADDETLAGKAGNQEDSSSYTENEETLNK 196
Query: 61 -------DVE------FSSSISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEF 120
DVE SS SNNDV+NVASLQEDF+SDSSL T VAP SL S I PE
Sbjct: 197 NRVGDGVDVEELAENHVESSSSNNDVHNVASLQEDFQSDSSLNVTSVAPGSLSSLISPES 256
Query: 121 EIDAKVASCFKDVNDCH--------EPEMNILKDE 128
E D VASC KDVN+ H EPEMNILKDE
Sbjct: 257 EFDTNVASCLKDVNNYHPGLEVSTSEPEMNILKDE 291
BLAST of Csor.00g282210 vs. NCBI nr
Match:
XP_008439252.1 (PREDICTED: uncharacterized protein LOC103484091 isoform X2 [Cucumis melo])
HSP 1 Score: 139 bits (351), Expect = 2.28e-35
Identity = 93/155 (60.00%), Postives = 102/155 (65.81%), Query Frame = 0
Query: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTEN------ 60
MEALS QQELLLDS+TG D L EDEKEDN V+ADD A +GNQE+SSS TEN
Sbjct: 88 MEALSTQQELLLDSETGTDRLGEDEKEDNSVDADDETFAGKAGNQEDSSSCTENEETLNK 147
Query: 61 -------DVE------FSSSISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEF 120
DVE SS SNNDV+N ASLQEDF+SDSSL T VAP SL S I PE
Sbjct: 148 NRVGDGVDVEELAENYVESSSSNNDVHNFASLQEDFQSDSSLTVTAVAPGSLSSPISPES 207
Query: 121 EIDAKVASCFKDVNDCH--------EPEMNILKDE 128
E D+ VASC KDVN+CH EPEMN+LKDE
Sbjct: 208 EFDSNVASCLKDVNNCHPGLEVSTSEPEMNVLKDE 242
BLAST of Csor.00g282210 vs. ExPASy TrEMBL
Match:
A0A5A7SWX6 (Putative oxidoreductase/transition metal ion-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00680 PE=4 SV=1)
HSP 1 Score: 141 bits (355), Expect = 3.04e-36
Identity = 94/155 (60.65%), Postives = 103/155 (66.45%), Query Frame = 0
Query: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTEN------ 60
MEALS QQELLLDS+TG D L EDEKEDN V+ADD LA +GNQE+SSS TEN
Sbjct: 137 MEALSTQQELLLDSETGTDRLGEDEKEDNSVDADDETLAGKAGNQEDSSSCTENEETLNK 196
Query: 61 -------DVE------FSSSISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEF 120
DVE SS SNNDV+N ASLQEDF+SDSSL T VAP SL S I PE
Sbjct: 197 NRVGDGVDVEELAENYVESSSSNNDVHNFASLQEDFQSDSSLTVTAVAPGSLSSPISPES 256
Query: 121 EIDAKVASCFKDVNDCH--------EPEMNILKDE 128
E D+ VASC KDVN+CH EPEMN+LKDE
Sbjct: 257 EFDSNVASCLKDVNNCHPGLEVSTSEPEMNVLKDE 291
BLAST of Csor.00g282210 vs. ExPASy TrEMBL
Match:
A0A0A0L9T9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182230 PE=4 SV=1)
HSP 1 Score: 140 bits (352), Expect = 8.15e-36
Identity = 95/155 (61.29%), Postives = 102/155 (65.81%), Query Frame = 0
Query: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTEN------ 60
MEALS QQELLLDS+TG D L EDEKED V+ADD LA +GNQE+SSSYTEN
Sbjct: 137 MEALSTQQELLLDSETGTDRLGEDEKEDTSVDADDETLAGKAGNQEDSSSYTENEETLNK 196
Query: 61 -------DVE------FSSSISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEF 120
DVE SS SNNDV+NVASLQEDF+SDSSL T VAP SL S I PE
Sbjct: 197 NRVGDGVDVEELAENHVESSSSNNDVHNVASLQEDFQSDSSLNVTSVAPGSLSSLISPES 256
Query: 121 EIDAKVASCFKDVNDCH--------EPEMNILKDE 128
E D VASC KDVN+ H EPEMNILKDE
Sbjct: 257 EFDTNVASCLKDVNNYHPGLEVSTSEPEMNILKDE 291
BLAST of Csor.00g282210 vs. ExPASy TrEMBL
Match:
A0A1S3AZ05 (uncharacterized protein LOC103484091 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484091 PE=4 SV=1)
HSP 1 Score: 139 bits (351), Expect = 1.11e-35
Identity = 93/155 (60.00%), Postives = 102/155 (65.81%), Query Frame = 0
Query: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTEN------ 60
MEALS QQELLLDS+TG D L EDEKEDN V+ADD A +GNQE+SSS TEN
Sbjct: 88 MEALSTQQELLLDSETGTDRLGEDEKEDNSVDADDETFAGKAGNQEDSSSCTENEETLNK 147
Query: 61 -------DVE------FSSSISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEF 120
DVE SS SNNDV+N ASLQEDF+SDSSL T VAP SL S I PE
Sbjct: 148 NRVGDGVDVEELAENYVESSSSNNDVHNFASLQEDFQSDSSLTVTAVAPGSLSSPISPES 207
Query: 121 EIDAKVASCFKDVNDCH--------EPEMNILKDE 128
E D+ VASC KDVN+CH EPEMN+LKDE
Sbjct: 208 EFDSNVASCLKDVNNCHPGLEVSTSEPEMNVLKDE 242
BLAST of Csor.00g282210 vs. ExPASy TrEMBL
Match:
A0A1S3AYZ8 (uncharacterized protein LOC103484091 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484091 PE=4 SV=1)
HSP 1 Score: 139 bits (351), Expect = 1.11e-35
Identity = 93/155 (60.00%), Postives = 102/155 (65.81%), Query Frame = 0
Query: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTEN------ 60
MEALS QQELLLDS+TG D L EDEKEDN V+ADD A +GNQE+SSS TEN
Sbjct: 137 MEALSTQQELLLDSETGTDRLGEDEKEDNSVDADDETFAGKAGNQEDSSSCTENEETLNK 196
Query: 61 -------DVE------FSSSISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEF 120
DVE SS SNNDV+N ASLQEDF+SDSSL T VAP SL S I PE
Sbjct: 197 NRVGDGVDVEELAENYVESSSSNNDVHNFASLQEDFQSDSSLTVTAVAPGSLSSPISPES 256
Query: 121 EIDAKVASCFKDVNDCH--------EPEMNILKDE 128
E D+ VASC KDVN+CH EPEMN+LKDE
Sbjct: 257 EFDSNVASCLKDVNNCHPGLEVSTSEPEMNVLKDE 291
BLAST of Csor.00g282210 vs. ExPASy TrEMBL
Match:
A0A6J1CIE3 (uncharacterized protein LOC111011467 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011467 PE=4 SV=1)
HSP 1 Score: 123 bits (309), Expect = 5.04e-30
Identity = 90/154 (58.44%), Postives = 96/154 (62.34%), Query Frame = 0
Query: 1 MEALSMQQELLLDSDTGHDSLDEDEKEDNIVNADDGALADNSGNQEESSSYTEN------ 60
MEALS QQELLLDSDTG+D L E+EKEDN VNADD LA +GN EESSSYTEN
Sbjct: 39 MEALSTQQELLLDSDTGNDRLGENEKEDNSVNADDRTLAGKTGNHEESSSYTENEDLDKN 98
Query: 61 ------DVE------FSSSISNNDVNNVASLQEDFRSDSSLGATLVAPRSLCSSILPEFE 120
DVE SS SNNDVNNVAS QEDF+SDS T VA SL S + E
Sbjct: 99 TVGDGVDVEKLSGNDVESSSSNNDVNNVASFQEDFQSDSPSAVTSVAAGSLSSLM----E 158
Query: 121 IDAKVASCFKDVNDCH---------EPEMNILKD 127
D+ VAS KD NDCH EPEMNILKD
Sbjct: 159 TDSSVASGSKDGNDCHAVGTEVLNSEPEMNILKD 188
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6576719.1 | 1.27e-78 | 100.00 | hypothetical protein SDJN03_24293, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAA0033665.1 | 6.27e-36 | 60.65 | putative oxidoreductase/transition metal ion-binding protein [Cucumis melo var. ... | [more] |
| XP_011651165.1 | 1.67e-35 | 61.29 | uncharacterized protein LOC101215442 isoform X2 [Cucumis sativus] | [more] |
| XP_011651163.1 | 1.68e-35 | 61.29 | uncharacterized protein LOC101215442 isoform X1 [Cucumis sativus] | [more] |
| XP_008439252.1 | 2.28e-35 | 60.00 | PREDICTED: uncharacterized protein LOC103484091 isoform X2 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SWX6 | 3.04e-36 | 60.65 | Putative oxidoreductase/transition metal ion-binding protein OS=Cucumis melo var... | [more] |
| A0A0A0L9T9 | 8.15e-36 | 61.29 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182230 PE=4 SV=1 | [more] |
| A0A1S3AZ05 | 1.11e-35 | 60.00 | uncharacterized protein LOC103484091 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A1S3AYZ8 | 1.11e-35 | 60.00 | uncharacterized protein LOC103484091 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A6J1CIE3 | 5.04e-30 | 58.44 | uncharacterized protein LOC111011467 isoform X3 OS=Momordica charantia OX=3673 G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
