Csor.00g281780 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g281780
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	BHLH domain-containing protein
Location	Csor_Chr16: 723802 .. 725393 (-)
RNA-Seq Expression	Csor.00g281780
Synteny	Csor.00g281780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCCTTTCAATCATCCCTCACACCATCATCAACCCCATCAACTTTCAGGCTGTGAGGGAAGCAGTGAACTTAATGCCAACAAAATTGAATCCACTCATAATGAAGTGAGGAAGATTGTGCACAGAGATCTCGAACGAGAACGAAGGAAACAAATGCTCTCCCTTCTTACCAACCTTCGATCTTTGCTTCCTCTTCAACTTGTAGAGGTAAACACAGTTACAAAATTCCATCTTTTGCTTCTCTTCCTTTCTTTTCTTTTAAAATTACCTTGTCTTTTTTGCTCGTACATGTATCAGTTAATAAGCTTGACTTAGTTGACTTAATAGAATTTTAGGATAATTGTTCCGAAGTTATTGACTCAGAAAATGGTTAGTTTTGAGTCAAAATTGTTAGACGTGGTTAACTTGCATAGAAAGTTTAGACATATGTTATTTTCTCGGCCACAAAGAGAATTAATAACCATGAGCTTAAGGTTCCTCGGTTCAAAATCTCTCTCCACTCAGATTTTTGGAGAGGAGAACAAACCACATCATTTATAAGAGTATAGAAACCTTCCCCTATAAACGCGTTTTAAAGCCTTGAGGGGAACCCCGAAATGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATCAGAGCCAGACATCAAACGATGTGTCAGCCTTCTCGCTGTTCCCCGAAGGGGGTAGACACAAGGCGGTGTGCCAGTAATGACACTGGCCCCAAAGGGGGGGTGGATTTGGGGGCGGTCCCACATCGATGGGAGGAAGGAAAGAGTGCCACCGAGAACGCTGGGCCCCGAAGGGGGTGGATTATGATGTCCCACATTGATTGGGGAAAAGAACAAACCACCATCTTAGAAACCTTCTCCCTAGCAGACGTATTCTAAAGCCTTGAGGGGAAGCTCGAAAGGCAAAACCCAAAAAGAACAATATCTGCCAGCGGTGGATCTGGGTTGGGTCGTTACAAGTTGTGTTGTGTTTTTTTGCTTCTTTCATTTGTTTGGACCATGTTTTGATTGTGGGCCGTTTCCAATAATATGTAATTACTTTGAGGCTAATGTTGAGGGGATTTTAGGGTAGGCGTACAAGAGCTGATATTGTGGATGAGGCTGTGAATTATATTGAACACTTGAGAGGAAAGATGAGCGAGCTTCATGTGAAAAGAGATGCCATAAAGGGGCTGCATTTGGCCGATGAAAGTTCGGATCTTTGTCCCTCAAGTTGCATTGTGATTAAGCCATATTCGTGTGGGTTGGAGATTGTGATAAGCATCTTTAGAGAGCAAAATTTGGAGCTTTCAGAAGTGATGAGGGTTTTACTTGAAGAAAGTATTGAAATTACGAGTTGTGCTTCCACCAAAGTGAAGGAAAGGATGCTCCACACCATTCACACAAAGGTTTGCATGATTGGCCTCACTTTTTTCTTTCTTTCTAATGTTTAGAGGTTGATTTTGTTATGTTGATTGCTTTTGTTTTTCAGGTAGATGATCCAACGAGGATTGATGTACATGAACTGCAACAAAAACTGTACCAAGTTTGCACTTTTGTGTCATTTGGTGCTTAA

mRNA sequence

ATGTTTCCTTTCAATCATCCCTCACACCATCATCAACCCCATCAACTTTCAGGCTGTGAGGGAAGCAGTGAACTTAATGCCAACAAAATTGAATCCACTCATAATGAAGTGAGGAAGATTGTGCACAGAGATCTCGAACGAGAACGAAGGAAACAAATGCTCTCCCTTCTTACCAACCTTCGATCTTTGCTTCCTCTTCAACTTGTAGAGGGTAGGCGTACAAGAGCTGATATTGTGGATGAGGCTGTGAATTATATTGAACACTTGAGAGGAAAGATGAGCGAGCTTCATGTGAAAAGAGATGCCATAAAGGGGCTGCATTTGGCCGATGAAAGTTCGGATCTTTGTCCCTCAAGTTGCATTGTGATTAAGCCATATTCGTGTGGGTTGGAGATTGTGATAAGCATCTTTAGAGAGCAAAATTTGGAGCTTTCAGAAGTGATGAGGGTTTTACTTGAAGAAAGTATTGAAATTACGAGTTGTGCTTCCACCAAAGTGAAGGAAAGGATGCTCCACACCATTCACACAAAGGTAGATGATCCAACGAGGATTGATGTACATGAACTGCAACAAAAACTGTACCAAGTTTGCACTTTTGTGTCATTTGGTGCTTAA

Coding sequence (CDS)

ATGTTTCCTTTCAATCATCCCTCACACCATCATCAACCCCATCAACTTTCAGGCTGTGAGGGAAGCAGTGAACTTAATGCCAACAAAATTGAATCCACTCATAATGAAGTGAGGAAGATTGTGCACAGAGATCTCGAACGAGAACGAAGGAAACAAATGCTCTCCCTTCTTACCAACCTTCGATCTTTGCTTCCTCTTCAACTTGTAGAGGGTAGGCGTACAAGAGCTGATATTGTGGATGAGGCTGTGAATTATATTGAACACTTGAGAGGAAAGATGAGCGAGCTTCATGTGAAAAGAGATGCCATAAAGGGGCTGCATTTGGCCGATGAAAGTTCGGATCTTTGTCCCTCAAGTTGCATTGTGATTAAGCCATATTCGTGTGGGTTGGAGATTGTGATAAGCATCTTTAGAGAGCAAAATTTGGAGCTTTCAGAAGTGATGAGGGTTTTACTTGAAGAAAGTATTGAAATTACGAGTTGTGCTTCCACCAAAGTGAAGGAAAGGATGCTCCACACCATTCACACAAAGGTAGATGATCCAACGAGGATTGATGTACATGAACTGCAACAAAAACTGTACCAAGTTTGCACTTTTGTGTCATTTGGTGCTTAA

Protein sequence

MFPFNHPSHHHQPHQLSGCEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAIKGLHLADESSDLCPSSCIVIKPYSCGLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDDPTRIDVHELQQKLYQVCTFVSFGA

Homology

[Close]

BLAST of Csor.00g281780 vs. ExPASy Swiss-Prot
Match: Q9LQ08 (Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20
Identity = 66/200 (33.00%), Postives = 115/200 (57.50%), Query Frame = 0


Query: 21  GSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVD 80
           G++E N N       E +K+ HRD+ER+RR+++ SL   LR+LLP Q ++G+R+ +D + 
Sbjct: 60  GANEANKN---DDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIV 119

Query: 81  EAVNYIEHLRGKMSELHVKRDAIKGL----------------HLADESSDLCPSSC---- 140
           +AVNYI+ L+ K+ EL+ KR+ +K +                 L+  ++    SSC    
Sbjct: 120 QAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVG 179

Query: 141 -----IVIKPYSCGLEIVISIFREQNLE-LSEVMRVLLEES-IEITSCASTKVKERMLHT 194
                +V+ P   G+EI+IS    +N   LS V+++L +E    + SC S + ++R +HT
Sbjct: 180 DKHITVVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHT 239

[Close]

BLAST of Csor.00g281780 vs. ExPASy Swiss-Prot
Match: Q9LN95 (Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.5e-19
Identity = 67/196 (34.18%), Postives = 107/196 (54.59%), Query Frame = 0


Query: 19  CEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRADI 78
           CE +  L+         + ++  H++LER+RR++  SL   LR LLP Q ++G+R+ AD 
Sbjct: 56  CETTMTLSEIMKGDDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADH 115

Query: 79  VDEAVNYIEHLRGKMSELHVKRDAIKGLHLADES------SDLCPSSC---------IVI 138
           V EAVNYI+ L+ K+ E+  KRD IK       S        L  S+C         +V+
Sbjct: 116 VLEAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVV 175

Query: 139 KPYSCGLEIVISIFREQNLELSEVMRVLLEES-IEITSCASTKVKERMLHTIHTKVDDPT 198
           +P   GLEIV+S        LS V+++L +E    I SC ST++ +  +HTI ++V++  
Sbjct: 176 RPCLIGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGI 235

[Close]

BLAST of Csor.00g281780 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.3e-19
Identity = 55/162 (33.95%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 37  VRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSEL 96
           + K+VH+++E+ RR++M SL  +LRSLLPL+ ++G+R+ +D V  AVNYI++L+  + ++
Sbjct: 1   MEKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDI 60

Query: 97  HVKRDAI-----KGLHLADESSDLCPSSCIVIKPYSCGLEIVISIFREQNLELSEVMRVL 156
           + KRD +     +    ++E      S+ +VI+P   G+EIV+SI +      S V++VL
Sbjct: 61  NSKRDDLVLLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSILQ---TPFSSVLQVL 120

Query: 157 LEESIEITSCASTKVKERMLHTIHTKVDDPTRIDVHELQQKL 194
            E  + +     + V +R++HT+  +V+D   ID+ +L+  L
Sbjct: 121 REHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTL 159

[Close]

BLAST of Csor.00g281780 vs. ExPASy Swiss-Prot
Match: Q9STJ6 (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 63/198 (31.82%), Postives = 114/198 (57.58%), Query Frame = 0


Query: 12  QPHQLSGCEGSSELNANKIESTHN-EVRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVE 71
           +P   +G  G S  +    E+  N + +K++HRD+ER+RR++M +L   LR+ LPL+ ++
Sbjct: 16  RPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIK 75

Query: 72  GRRTRADIVDEAVNYIEHLRGKMSELHVKRDAI---------KGLHLADESSDLCPS--S 131
           G+R  +D V+ AVN+I+    ++ EL  +RD +                  SD+  S  +
Sbjct: 76  GKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPA 135

Query: 132 CIVIKPYSCGLEIVISIFRE--QNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTK 191
            ++++P+  GLE+V+S      + L LS+V+  + E+ +E+ S  +T+V +R++HTI  +
Sbjct: 136 TVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVE 195

Query: 192 VDDPTRIDVHELQQKLYQ 196
           V+    ID+  LQQKL +
Sbjct: 196 VNSFGCIDLLWLQQKLVE 213

[Close]

BLAST of Csor.00g281780 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.3e-17
Identity = 59/173 (34.10%), Postives = 107/173 (61.85%), Query Frame = 0


Query: 37  VRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSEL 96
           + K++HR+ ER+RR++M SL  +LRSLLPL  ++G+R+ +D V+EAVNYI++L+ K+ EL
Sbjct: 1   MEKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKEL 60

Query: 97  HVKRDAI----KGLHLADESSD-------LCPSSCIVIKPYSCGLEIVISI-FREQNLEL 156
            V+RD +    +G  L   + D       +   + +V++    G+EI++S          
Sbjct: 61  SVRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRF 120

Query: 157 SEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDD-PTRIDVHELQQKLYQV 197
           S V++VL E  + + +  S+ V +R+++TI  +V+D    ID+ EL+++L ++
Sbjct: 121 SSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]

BLAST of Csor.00g281780 vs. NCBI nr
Match: KAG6576761.1 (Transcription factor basic helix-loop-helix 118, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402 bits (1034), Expect = 2.14e-141
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MFPFNHPSHHHQPHQLSGCEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNL 60
           MFPFNHPSHHHQPHQLSGCEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNL
Sbjct: 1   MFPFNHPSHHHQPHQLSGCEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNL 60

Query: 61  RSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAIKGLHLADESSDLCPSSC 120
           RSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAIKGLHLADESSDLCPSSC
Sbjct: 61  RSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAIKGLHLADESSDLCPSSC 120

Query: 121 IVIKPYSCGLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDD 180
           IVIKPYSCGLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDD
Sbjct: 121 IVIKPYSCGLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDD 180

Query: 181 PTRIDVHELQQKLYQVCTFVSFGA 204
           PTRIDVHELQQKLYQVCTFVSFGA
Sbjct: 181 PTRIDVHELQQKLYQVCTFVSFGA 204

[Close]

BLAST of Csor.00g281780 vs. NCBI nr
Match: XP_022923000.1 (transcription factor bHLH118-like [Cucurbita moschata])

HSP 1 Score: 382 bits (982), Expect = 1.75e-133
Identity = 196/204 (96.08%), Postives = 199/204 (97.55%), Query Frame = 0


Query: 1   MFPFNHPSHHHQPHQLSGCEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNL 60
           MFPFNHPSHHHQPHQLSGCEGSSELN NKIESTHNEVRKIVHRDLERERRKQMLSLLTNL
Sbjct: 1   MFPFNHPSHHHQPHQLSGCEGSSELNPNKIESTHNEVRKIVHRDLERERRKQMLSLLTNL 60

Query: 61  RSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAIKGLHLADESSDLCPSSC 120
           RSLLPLQLVEGRRTRADIVDEAVNYIEH RGK+SELHVKRDAIKGLHL DESSDLCPSSC
Sbjct: 61  RSLLPLQLVEGRRTRADIVDEAVNYIEHFRGKISELHVKRDAIKGLHL-DESSDLCPSSC 120

Query: 121 IVIKPYSCGLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDD 180
           +VIKPYS GLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKE MLHTIHTKVDD
Sbjct: 121 VVIKPYSGGLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKEMMLHTIHTKVDD 180

Query: 181 PTRIDVHELQQKLYQVCTFVSFGA 204
           PTRIDVHELQQKLY+VCTFVSFGA
Sbjct: 181 PTRIDVHELQQKLYRVCTFVSFGA 203

[Close]

BLAST of Csor.00g281780 vs. NCBI nr
Match: XP_022984444.1 (transcription factor bHLH118-like [Cucurbita maxima])

HSP 1 Score: 361 bits (926), Expect = 6.01e-125
Identity = 187/204 (91.67%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MFPFNHPSHHHQPHQLSGCEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNL 60
           MFPFN PSHHHQPHQLSGCEGSSELNANKIESTHNEVR+IVHRDLERERRKQM SL T+L
Sbjct: 1   MFPFNDPSHHHQPHQLSGCEGSSELNANKIESTHNEVRQIVHRDLERERRKQMGSLFTDL 60

Query: 61  RSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAIKGLHLADESSDLCPSSC 120
           RSLLPL LVEGRRTRADIVDEAVNYIEHLRGK+SEL VKRDAIKGLHL DESSDLCPSSC
Sbjct: 61  RSLLPLPLVEGRRTRADIVDEAVNYIEHLRGKISELQVKRDAIKGLHL-DESSDLCPSSC 120

Query: 121 IVIKPYSCGLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDD 180
           +VIKPYS GLEI+ISIFREQNLELSEVMRVL+EESIEI SCASTKVKERMLHTIHTKVDD
Sbjct: 121 VVIKPYSGGLEIMISIFREQNLELSEVMRVLVEESIEIMSCASTKVKERMLHTIHTKVDD 180

Query: 181 PTRIDVHELQQKLYQVCTFVSFGA 204
           P RIDVHELQQKL+QVCT VSFGA
Sbjct: 181 PKRIDVHELQQKLHQVCTSVSFGA 203

[Close]

BLAST of Csor.00g281780 vs. NCBI nr
Match: XP_023552832.1 (transcription factor bHLH118-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342 bits (878), Expect = 9.38e-118
Identity = 179/193 (92.75%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 17  SGCEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRA 76
           +GCEGSSELNANKIESTHNEVRKIVHRD+ERE RKQM+SLL+NL SLLPLQLVEGRRTRA
Sbjct: 3   AGCEGSSELNANKIESTHNEVRKIVHRDIEREPRKQMVSLLSNLPSLLPLQLVEGRRTRA 62

Query: 77  DIVDEAVNYIEHLRGKMSELHVKRDA-----IKGLHLADESSDLCPSSCIVIKPYSCGLE 136
           DIVDEAVNYIEHLRGK+SELHVKRDA     IKGLHLADESSDLCPSSCIVIKPYSCGLE
Sbjct: 63  DIVDEAVNYIEHLRGKISELHVKRDAVKRDAIKGLHLADESSDLCPSSCIVIKPYSCGLE 122

Query: 137 IVISIFREQNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDDPTRIDVHELQQ 196
           IVISIFREQNLELSEVM+VLLEESIEITSCASTKVKERMLHTI TKVDDPTRIDVHELQQ
Sbjct: 123 IVISIFREQNLELSEVMKVLLEESIEITSCASTKVKERMLHTIQTKVDDPTRIDVHELQQ 182

Query: 197 KLYQVCTFVSFGA 204
           KLYQVCTFVSFGA
Sbjct: 183 KLYQVCTFVSFGA 195

[Close]

BLAST of Csor.00g281780 vs. NCBI nr
Match: KAG7014801.1 (Receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268 bits (685), Expect = 3.93e-80
Identity = 147/171 (85.96%), Postives = 149/171 (87.13%), Query Frame = 0


Query: 23  SELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEA 82
           +ELNANKIESTHNEVRKIVHRDLERERRKQM+SLLTNLRSLLPLQLVE            
Sbjct: 637 NELNANKIESTHNEVRKIVHRDLERERRKQMVSLLTNLRSLLPLQLVE------------ 696

Query: 83  VNYIEHLRGKMSELHVKRDAIKGLHLADESSDLCPSSCIVIKPYSCGLEIVISIFREQNL 142
                     MSELHVKRDAIKGLHLADESSDLCPSSCIVIKPYSCGLEIVISIFREQNL
Sbjct: 697 ----------MSELHVKRDAIKGLHLADESSDLCPSSCIVIKPYSCGLEIVISIFREQNL 756

Query: 143 ELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDDPTRIDVHELQQKL 193
           ELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDDPTRIDVHELQQKL
Sbjct: 757 ELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDDPTRIDVHELQQKL 785

[Close]

BLAST of Csor.00g281780 vs. ExPASy TrEMBL
Match: A0A6J1EAE1 (transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430817 PE=4 SV=1)

HSP 1 Score: 382 bits (982), Expect = 8.46e-134
Identity = 196/204 (96.08%), Postives = 199/204 (97.55%), Query Frame = 0


Query: 1   MFPFNHPSHHHQPHQLSGCEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNL 60
           MFPFNHPSHHHQPHQLSGCEGSSELN NKIESTHNEVRKIVHRDLERERRKQMLSLLTNL
Sbjct: 1   MFPFNHPSHHHQPHQLSGCEGSSELNPNKIESTHNEVRKIVHRDLERERRKQMLSLLTNL 60

Query: 61  RSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAIKGLHLADESSDLCPSSC 120
           RSLLPLQLVEGRRTRADIVDEAVNYIEH RGK+SELHVKRDAIKGLHL DESSDLCPSSC
Sbjct: 61  RSLLPLQLVEGRRTRADIVDEAVNYIEHFRGKISELHVKRDAIKGLHL-DESSDLCPSSC 120

Query: 121 IVIKPYSCGLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDD 180
           +VIKPYS GLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKE MLHTIHTKVDD
Sbjct: 121 VVIKPYSGGLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKEMMLHTIHTKVDD 180

Query: 181 PTRIDVHELQQKLYQVCTFVSFGA 204
           PTRIDVHELQQKLY+VCTFVSFGA
Sbjct: 181 PTRIDVHELQQKLYRVCTFVSFGA 203

[Close]

BLAST of Csor.00g281780 vs. ExPASy TrEMBL
Match: A0A6J1JAJ0 (transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111482745 PE=4 SV=1)

HSP 1 Score: 361 bits (926), Expect = 2.91e-125
Identity = 187/204 (91.67%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MFPFNHPSHHHQPHQLSGCEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNL 60
           MFPFN PSHHHQPHQLSGCEGSSELNANKIESTHNEVR+IVHRDLERERRKQM SL T+L
Sbjct: 1   MFPFNDPSHHHQPHQLSGCEGSSELNANKIESTHNEVRQIVHRDLERERRKQMGSLFTDL 60

Query: 61  RSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAIKGLHLADESSDLCPSSC 120
           RSLLPL LVEGRRTRADIVDEAVNYIEHLRGK+SEL VKRDAIKGLHL DESSDLCPSSC
Sbjct: 61  RSLLPLPLVEGRRTRADIVDEAVNYIEHLRGKISELQVKRDAIKGLHL-DESSDLCPSSC 120

Query: 121 IVIKPYSCGLEIVISIFREQNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDD 180
           +VIKPYS GLEI+ISIFREQNLELSEVMRVL+EESIEI SCASTKVKERMLHTIHTKVDD
Sbjct: 121 VVIKPYSGGLEIMISIFREQNLELSEVMRVLVEESIEIMSCASTKVKERMLHTIHTKVDD 180

Query: 181 PTRIDVHELQQKLYQVCTFVSFGA 204
           P RIDVHELQQKL+QVCT VSFGA
Sbjct: 181 PKRIDVHELQQKLHQVCTSVSFGA 203

[Close]

BLAST of Csor.00g281780 vs. ExPASy TrEMBL
Match: A0A0A0L9L0 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G178580 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 3.00e-78
Identity = 140/219 (63.93%), Postives = 165/219 (75.34%), Query Frame = 0


Query: 1   MFPFNHPSHHHQPHQL--------------SGCEGSSELNAN-KI-ESTHNEVRKIVHRD 60
           MFPFN  SH    +Q+               GC  +  LN N KI E+T NE +KI+HRD
Sbjct: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60

Query: 61  LERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAI- 120
           LERERRKQM SLLTNLRSLLPL+ ++GRR+R DIVDEAVNYIE+LRG+M+ELHVKRDAI 
Sbjct: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120

Query: 121 KGLHLADESS---DLCPSSCIVIKPYSCGLEIVIS--IFREQNLELSEVMRVLLEESIEI 180
           K LHL   SS   D+  +SC+VIK YS GLEIVIS  I  EQN +LS VMRVL+E+SIEI
Sbjct: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180

Query: 181 TSCASTKVKERMLHTIHTKVDDPTRIDVHELQQKLYQVC 197
            +C+STK+ ERMLHTI TKVDDPT+ID+HEL+QKLYQVC
Sbjct: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVC 219

[Close]

BLAST of Csor.00g281780 vs. ExPASy TrEMBL
Match: A0A1S3AY11 (transcription factor bHLH36-like OS=Cucumis melo OX=3656 GN=LOC103484025 PE=4 SV=1)

HSP 1 Score: 231 bits (589), Expect = 1.04e-73
Identity = 136/218 (62.39%), Postives = 164/218 (75.23%), Query Frame = 0


Query: 1   MFPFNHPSHHHQPHQL-----------SGCEGSSELNAN---KI-ESTHNEVRKIVHRDL 60
           MFPFN  SH    +Q+           S  EG S  N N   KI E+T NE +KI+HRD+
Sbjct: 1   MFPFNDSSHDIDNYQIHLQNLFSYQLISSQEGGSSENLNTNNKIDETTQNEEKKIMHRDV 60

Query: 61  ERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAI-K 120
           ERERRKQM SLLTNLRSLLPL+ ++GRR+R DIVDEAVNYIE+LRGK++ELH+KRDAI K
Sbjct: 61  ERERRKQMASLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGKINELHLKRDAIVK 120

Query: 121 GLHLADESS---DLCPSSCIVIKPYSCGLEIVIS--IFREQNLELSEVMRVLLEESIEIT 180
            LHL   SS   D+  +SC+VIK YS GLEIVIS  I  EQN +LS VMRVL+E+SIEI 
Sbjct: 121 RLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEIE 180

Query: 181 SCASTKVKERMLHTIHTKVDDPTRIDVHELQQKLYQVC 197
           +C+STK+ ERML+TI TKVDD T+ID+HEL+Q+LYQVC
Sbjct: 181 TCSSTKLNERMLYTIQTKVDDSTKIDLHELKQRLYQVC 218

[Close]

BLAST of Csor.00g281780 vs. ExPASy TrEMBL
Match: A0A6J1CHG5 (transcription factor bHLH36-like OS=Momordica charantia OX=3673 GN=LOC111011678 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 3.02e-68
Identity = 128/218 (58.72%), Postives = 157/218 (72.02%), Query Frame = 0


Query: 1   MFPFNHPSHHHQPHQLSGCEGSS---------ELNANKIESTHNEVRKIVHRDLERERRK 60
           MFPFN      Q ++ S  EGSS           N+  +  T ++ RKI+HRDLERERRK
Sbjct: 1   MFPFN------QFYEFSAPEGSSCDFTTHQNLVSNSENVGRTDDQDRKIMHRDLERERRK 60

Query: 61  QMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAIKGLHLA-- 120
           QM SLLTNLRSLLPL+ ++GRR+RAD+V+EAV YIEHL+GK+SELH+KRDA+K ++L   
Sbjct: 61  QMASLLTNLRSLLPLEFIKGRRSRADLVNEAVRYIEHLKGKISELHIKRDALKRVYLDSL 120

Query: 121 ----DESSDLCPSSCIVIKPYSCGLEIVISI-FREQNLELSEVMRVLLEESIEITSCAST 180
               +ESS    SSC+VI PYS GLEIVIS  FRE+ L+LS VMRVLL++S  + SCAST
Sbjct: 121 GYQNNESS----SSCVVINPYSGGLEIVISCCFREEKLKLSGVMRVLLQQSTHVQSCAST 180

Query: 181 KVKERMLHTIHTKVDDPTRIDVHELQQKLYQVCTFVSF 202
           KV  RM HTI +KVD   RID+ ELQ+KLYQVC F SF
Sbjct: 181 KVNGRMFHTIQSKVDVSRRIDILELQRKLYQVCNFGSF 208

[Close]

BLAST of Csor.00g281780 vs. TAIR 10
Match: AT1G62975.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-21
Identity = 66/200 (33.00%), Postives = 115/200 (57.50%), Query Frame = 0


Query: 21  GSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVD 80
           G++E N N       E +K+ HRD+ER+RR+++ SL   LR+LLP Q ++G+R+ +D + 
Sbjct: 60  GANEANKN---DDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIV 119

Query: 81  EAVNYIEHLRGKMSELHVKRDAIKGL----------------HLADESSDLCPSSC---- 140
           +AVNYI+ L+ K+ EL+ KR+ +K +                 L+  ++    SSC    
Sbjct: 120 QAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVG 179

Query: 141 -----IVIKPYSCGLEIVISIFREQNLE-LSEVMRVLLEES-IEITSCASTKVKERMLHT 194
                +V+ P   G+EI+IS    +N   LS V+++L +E    + SC S + ++R +HT
Sbjct: 180 DKHITVVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHT 239

[Close]

BLAST of Csor.00g281780 vs. TAIR 10
Match: AT1G12540.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20
Identity = 67/196 (34.18%), Postives = 107/196 (54.59%), Query Frame = 0


Query: 19  CEGSSELNANKIESTHNEVRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRADI 78
           CE +  L+         + ++  H++LER+RR++  SL   LR LLP Q ++G+R+ AD 
Sbjct: 56  CETTMTLSEIMKGDDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADH 115

Query: 79  VDEAVNYIEHLRGKMSELHVKRDAIKGLHLADES------SDLCPSSC---------IVI 138
           V EAVNYI+ L+ K+ E+  KRD IK       S        L  S+C         +V+
Sbjct: 116 VLEAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVV 175

Query: 139 KPYSCGLEIVISIFREQNLELSEVMRVLLEES-IEITSCASTKVKERMLHTIHTKVDDPT 198
           +P   GLEIV+S        LS V+++L +E    I SC ST++ +  +HTI ++V++  
Sbjct: 176 RPCLIGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGI 235

[Close]

BLAST of Csor.00g281780 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-20
Identity = 55/162 (33.95%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 37  VRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSEL 96
           + K+VH+++E+ RR++M SL  +LRSLLPL+ ++G+R+ +D V  AVNYI++L+  + ++
Sbjct: 1   MEKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDI 60

Query: 97  HVKRDAI-----KGLHLADESSDLCPSSCIVIKPYSCGLEIVISIFREQNLELSEVMRVL 156
           + KRD +     +    ++E      S+ +VI+P   G+EIV+SI +      S V++VL
Sbjct: 61  NSKRDDLVLLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSILQ---TPFSSVLQVL 120

Query: 157 LEESIEITSCASTKVKERMLHTIHTKVDDPTRIDVHELQQKL 194
            E  + +     + V +R++HT+  +V+D   ID+ +L+  L
Sbjct: 121 REHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTL 159

[Close]

BLAST of Csor.00g281780 vs. TAIR 10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 8.9e-20
Identity = 63/198 (31.82%), Postives = 114/198 (57.58%), Query Frame = 0


Query: 12  QPHQLSGCEGSSELNANKIESTHN-EVRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVE 71
           +P   +G  G S  +    E+  N + +K++HRD+ER+RR++M +L   LR+ LPL+ ++
Sbjct: 16  RPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIK 75

Query: 72  GRRTRADIVDEAVNYIEHLRGKMSELHVKRDAI---------KGLHLADESSDLCPS--S 131
           G+R  +D V+ AVN+I+    ++ EL  +RD +                  SD+  S  +
Sbjct: 76  GKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPA 135

Query: 132 CIVIKPYSCGLEIVISIFRE--QNLELSEVMRVLLEESIEITSCASTKVKERMLHTIHTK 191
            ++++P+  GLE+V+S      + L LS+V+  + E+ +E+ S  +T+V +R++HTI  +
Sbjct: 136 TVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVE 195

Query: 192 VDDPTRIDVHELQQKLYQ 196
           V+    ID+  LQQKL +
Sbjct: 196 VNSFGCIDLLWLQQKLVE 213

[Close]

BLAST of Csor.00g281780 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.7e-18
Identity = 59/173 (34.10%), Postives = 107/173 (61.85%), Query Frame = 0


Query: 37  VRKIVHRDLERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSEL 96
           + K++HR+ ER+RR++M SL  +LRSLLPL  ++G+R+ +D V+EAVNYI++L+ K+ EL
Sbjct: 1   MEKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKEL 60

Query: 97  HVKRDAI----KGLHLADESSD-------LCPSSCIVIKPYSCGLEIVISI-FREQNLEL 156
            V+RD +    +G  L   + D       +   + +V++    G+EI++S          
Sbjct: 61  SVRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRF 120

Query: 157 SEVMRVLLEESIEITSCASTKVKERMLHTIHTKVDD-PTRIDVHELQQKLYQV 197
           S V++VL E  + + +  S+ V +R+++TI  +V+D    ID+ EL+++L ++
Sbjct: 121 SSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

The following BLAST results are available for this feature:

BLAST of Csor.00g281780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQ08	2.3e-20	33.00	Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=...	[more]
Q9LN95	2.5e-19	34.18	Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1	[more]
Q9STJ7	3.3e-19	33.95	Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=...	[more]
Q9STJ6	1.3e-18	31.82	Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=...	[more]
Q9FLI1	5.3e-17	34.10	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]

BLAST of Csor.00g281780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576761.1	2.14e-141	100.00	Transcription factor basic helix-loop-helix 118, partial [Cucurbita argyrosperma...	[more]
XP_022923000.1	1.75e-133	96.08	transcription factor bHLH118-like [Cucurbita moschata]	[more]
XP_022984444.1	6.01e-125	91.67	transcription factor bHLH118-like [Cucurbita maxima]	[more]
XP_023552832.1	9.38e-118	92.75	transcription factor bHLH118-like [Cucurbita pepo subsp. pepo]	[more]
KAG7014801.1	3.93e-80	85.96	Receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma s...	[more]

BLAST of Csor.00g281780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAE1	8.46e-134	96.08	transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430817 ...	[more]
A0A6J1JAJ0	2.91e-125	91.67	transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111482745 PE...	[more]
A0A0A0L9L0	3.00e-78	63.93	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G178580 PE=4 S...	[more]
A0A1S3AY11	1.04e-73	62.39	transcription factor bHLH36-like OS=Cucumis melo OX=3656 GN=LOC103484025 PE=4 SV...	[more]
A0A6J1CHG5	3.02e-68	58.72	transcription factor bHLH36-like OS=Momordica charantia OX=3673 GN=LOC111011678 ...	[more]

BLAST of Csor.00g281780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62975.1	1.6e-21	33.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	1.8e-20	34.18	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	2.3e-20	33.95	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25410.1	8.9e-20	31.82	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	3.7e-18	34.10	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 43..95 e-value: 5.9E-4 score: 29.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 38..90 e-value: 2.2E-9 score: 37.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 37..89 score: 13.033241
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 28..113 e-value: 6.0E-10 score: 41.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 35..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR13935:SF134	TRANSCRIPTION FACTOR BHLH FAMILY-RELATED	coord: 26..198
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 26..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g281780.m01	Csor.00g281780.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity