Csor.00g280970 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g280970
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr19: 10872413 .. 10873999 (-)
RNA-Seq ExpressionCsor.00g280970
SyntenyCsor.00g280970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGAAGTATCAATCCGTTGATGCTGAGTTGGTGGCGGCAAACTTCGGAATCGGCACTTGCGCAATCTTCAATATGGCTGGAGGTACGAGTTTGAAATTTTGTACTTCGAAGAGTCAAATCATCTTGTTAATACTGCTTACGGATTTTAGCATTCGAGAGTTTAAGGCGATGCCAGGTAGCCAGATTGGACTTTGAGAAGTTTTCCAAAATCTTATGTGATTGAAGTTTATCGGCATTCATATTTTTGTTTGAAATATTGGTGACTGTCGCTGTTTATTATGTGTCGTTACCATTTGGTCCACTATACTCATGCGCACCCTGAACCGCGAAACCTTGAACAACTGGTAAAGAGGTTGAAACTTGAACAATTTTTTCCTTCGGGAATATCTCAACAAAGCATTGAAGATTTTTGTGATACGCATCCATGTAGGGGCATGTCATCTGTCTAGCGACTCAACGTTTGCTATCTTGTATCTTTACTTCTCCGATTCGTGTAAGTTTTTCTGATTTGGTGCCTCATGTATGTTGCTTCTCGTCATATAATTCATTCTCACTGCGAGTTCCCCTTATCGGAAGTCATAGCTGTTTTCTTCTATATATTTATTGTAGAGGTGCTCAATTGATGGTTTCCTGCAATTTCTGAAGGATAACCAATCAAGAGCTGAGTTCTAGGAGTGTGTGTGTGTGTATACATACACACACACACACACACACACACTCACACACACACACACACACACACATATATATATACACACACACATATATATACACACACACACACACACATATATATATGTATATATTATACTCAATAGTTTCAATGTTGTGGATGTAACTAAAAATTTGCGTTGGCTCCTACTTTAATCGGTTGACCGATTCATTTGCCTTCTGAAGTTAATTTTTATCTGGGTTTGAATGAAGTCATTGTTGTAAATGGATCTAGAATGCGTAAAATCAACACCCTGTGCTTCTGATTCAATCATTAGCTAAACAGTAAGATTTTCCTCCCCTCTTTATTTTGCGCTGCATGTGTTTTTTCAGTTGGAGCTTGACTTTTATCTTGATTTGTGGCTCCTGTTTTTTGAGGAAATACCATTAACTGCTAGTCGACTTGTTAATCACACATCTGTAAAATCATTCAACTTCTAGTATTATAGCAGTATGGAGCTCGGAGCAGTCTTATGTTATTTTTCTTTTTGTTTTTTCTGATAAAAAATGTTATAATTGGTCATGTCATTATTATTCTGCTTTTATTCTCTTTTATAGTGCTGGGTCTCTAAGAATGTGCTAACAATTGAATGATTGTCTTGAGCTATTTCCAGTTCAAGATGAATTCTTTTCTAGAGCAGCGACGTAGCAGGAACACTTAAGAGTGGCTACTAAAGAGAGCAGGTTTGCATTTGAATAATACCCGAATTCTCTGTCTAGGCGAGTTAGTCTGCCGGCAATTAAGGAATCTGGATAGACACTACGCAACCTCTAAAGGTTCGGTAAGGTCACGTTGTACAATGAAATCTTGATTATTGTTGGCTTACAGGGACATGGAATCTTCGGTCTGGCTTGACGTCTTTTGCCATATAG

mRNA sequence

ATGCCGAAGTATCAATCCGTTGATGCTGAGTTGGTGGCGGCAAACTTCGGAATCGGCACTTGCGCAATCTTCAATATGGCTGGAGGTACGAGTTTGAAATTTTGTACTTCGAAGAGTCAAATCATCTTGTTAATACTGCTTACGGATTTTAGCATTCGAGAGTTTAAGGCGATGCCAGGGGCATGTCATCTGTCTAGCGACTCAACGTTTGCTATCTTGTATCTTTACTTCTCCGATTCGTGGACATGGAATCTTCGGTCTGGCTTGACGTCTTTTGCCATATAG

Coding sequence (CDS)

ATGCCGAAGTATCAATCCGTTGATGCTGAGTTGGTGGCGGCAAACTTCGGAATCGGCACTTGCGCAATCTTCAATATGGCTGGAGGTACGAGTTTGAAATTTTGTACTTCGAAGAGTCAAATCATCTTGTTAATACTGCTTACGGATTTTAGCATTCGAGAGTTTAAGGCGATGCCAGGGGCATGTCATCTGTCTAGCGACTCAACGTTTGCTATCTTGTATCTTTACTTCTCCGATTCGTGGACATGGAATCTTCGGTCTGGCTTGACGTCTTTTGCCATATAG

Protein sequence

MPKYQSVDAELVAANFGIGTCAIFNMAGGTSLKFCTSKSQIILLILLTDFSIREFKAMPGACHLSSDSTFAILYLYFSDSWTWNLRSGLTSFAI
Homology
[Close]
BLAST of Csor.00g280970 vs. NCBI nr
Match: KAG6572394.1 (hypothetical protein SDJN03_29122, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194 bits (493), Expect = 1.80e-62
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MPKYQSVDAELVAANFGIGTCAIFNMAGGTSLKFCTSKSQIILLILLTDFSIREFKAMPG 60
          MPKYQSVDAELVAANFGIGTCAIFNMAGGTSLKFCTSKSQIILLILLTDFSIREFKAMPG
Sbjct: 1  MPKYQSVDAELVAANFGIGTCAIFNMAGGTSLKFCTSKSQIILLILLTDFSIREFKAMPG 60

Query: 61 ACHLSSDSTFAILYLYFSDSWTWNLRSGLTSFAI 94
          ACHLSSDSTFAILYLYFSDSWTWNLRSGLTSFAI
Sbjct: 61 ACHLSSDSTFAILYLYFSDSWTWNLRSGLTSFAI 94

The following BLAST results are available for this feature:
BLAST of Csor.00g280970 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g280970 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6572394.11.80e-62100.00hypothetical protein SDJN03_29122, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g280970 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g280970 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g280970.m01Csor.00g280970.m01mRNA