|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCTTCTTCCCTCTCCCTTCTTGGTGTTTTTACCCTTCTTTTGTTATCCATTTTCAATCCCTCTATGTTCGTCTTGGCAAAAGAGAATGGAAGCAACATCGATAAGTTTGTCCATGATACTTGCAACAGATTTCCAGACAACGAACTGTATAACCTTTGCATTTCTGAGATTGATTCAGATCTTCGTGAAGATTTGAAGTCAAATTTGGCAGGTTTTCTAACTATATTTGTGAATCGTACCATCAACAATTTCAATGACAACCTTGTGTTCCTTCAAAAAGAGATAAAGTCAGGAAAGCTAGATGCTGAAACAAAATTGATGTATAACAAGTGTTCAGAATCTTTTGGAATGGGATACACTGATTTGCAAGAGTCAATGCACATATTATTGACCCAACCAGGTACAAACGTGTATGATTTACCGATTATGAGTGTTGATAAACATGTAGGCGTGTGTTTCGATGATTTCGAAGATGACCCTATTCCACCAGAGTGGACGTCTCGTTACAACCGTTCATGGAATTTAGTGTCTCTCATTTTAGGAACGTCTAATCTCATTAAATGTAATCGTGAAGCTTCATGTATCCCTTGA mRNA sequence ATGTCTTCTTCCCTCTCCCTTCTTGGTGTTTTTACCCTTCTTTTGTTATCCATTTTCAATCCCTCTATGTTCGTCTTGGCAAAAGAGAATGGAAGCAACATCGATAAGTTTGTCCATGATACTTGCAACAGATTTCCAGACAACGAACTGTATAACCTTTGCATTTCTGAGATTGATTCAGATCTTCGTGAAGATTTGAAGTCAAATTTGGCAGGTTTTCTAACTATATTTGTGAATCGTACCATCAACAATTTCAATGACAACCTTGTGTTCCTTCAAAAAGAGATAAAGTCAGGAAAGCTAGATGCTGAAACAAAATTGATGTATAACAAGTGTTCAGAATCTTTTGGAATGGGATACACTGATTTGCAAGAGTCAATGCACATATTATTGACCCAACCAGGTACAAACGTGTATGATTTACCGATTATGAGTGTTGATAAACATGTAGGCGTGTGTTTCGATGATTTCGAAGATGACCCTATTCCACCAGAGTGGACGTCTCGTTACAACCGTTCATGGAATTTAGTGTCTCTCATTTTAGGAACGTCTAATCTCATTAAATGTAATCGTGAAGCTTCATGTATCCCTTGA Coding sequence (CDS) ATGTCTTCTTCCCTCTCCCTTCTTGGTGTTTTTACCCTTCTTTTGTTATCCATTTTCAATCCCTCTATGTTCGTCTTGGCAAAAGAGAATGGAAGCAACATCGATAAGTTTGTCCATGATACTTGCAACAGATTTCCAGACAACGAACTGTATAACCTTTGCATTTCTGAGATTGATTCAGATCTTCGTGAAGATTTGAAGTCAAATTTGGCAGGTTTTCTAACTATATTTGTGAATCGTACCATCAACAATTTCAATGACAACCTTGTGTTCCTTCAAAAAGAGATAAAGTCAGGAAAGCTAGATGCTGAAACAAAATTGATGTATAACAAGTGTTCAGAATCTTTTGGAATGGGATACACTGATTTGCAAGAGTCAATGCACATATTATTGACCCAACCAGGTACAAACGTGTATGATTTACCGATTATGAGTGTTGATAAACATGTAGGCGTGTGTTTCGATGATTTCGAAGATGACCCTATTCCACCAGAGTGGACGTCTCGTTACAACCGTTCATGGAATTTAGTGTCTCTCATTTTAGGAACGTCTAATCTCATTAAATGTAATCGTGAAGCTTCATGTATCCCTTGA Protein sequence MSSSLSLLGVFTLLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNREASCIP
Homology
BLAST of Csor.00g280800 vs. NCBI nr
Match: KAG6572377.1 (hypothetical protein SDJN03_29105, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 401 bits (1030), Expect = 5.09e-141 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 Query: 1 MSSSLSLLGVFTLLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDS 60 MSSSLSLLGVFTLLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDS Sbjct: 1 MSSSLSLLGVFTLLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDS 60
Query: 61 DLREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGY 120 DLREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGY Sbjct: 61 DLREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGY 120
Query: 121 TDLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLI 180 TDLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLI Sbjct: 121 TDLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLI 180
Query: 181 LGTSNLIKCNREASCIP 197 LGTSNLIKCNREASCIP Sbjct: 181 LGTSNLIKCNREASCIP 197
BLAST of Csor.00g280800 vs. NCBI nr
Match: KAG6572388.1 (hypothetical protein SDJN03_29116, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 321 bits (822), Expect = 1.20e-109 Identity = 153/175 (87.43%), Postives = 159/175 (90.86%), Query Frame = 0 Query: 23 MFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAGFLTIFVNRTI 82 MFV A+EN SNIDKFVHDTCNRFPDNELYNLCISEIDSD REDLK NL G LTIFVN TI Sbjct: 1 MFVTAEENRSNIDKFVHDTCNRFPDNELYNLCISEIDSDPREDLKFNLTGILTIFVNHTI 60
Query: 83 NNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPGTNVYDLP 142 NNFNDNLVFLQ+EIKS KL+AETKLMY+KCSESFGMGYT LQESMHILLTQPGTNVYDLP Sbjct: 61 NNFNDNLVFLQQEIKSEKLEAETKLMYDKCSESFGMGYTKLQESMHILLTQPGTNVYDLP 120
Query: 143 IMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNREASCIP 197 MSVDK + VCFDDFEDDP+PPEW SRY SWNLVSLILGTSNLIKCN EASCIP Sbjct: 121 TMSVDKRISVCFDDFEDDPVPPEWQSRYKTSWNLVSLILGTSNLIKCNHEASCIP 175
BLAST of Csor.00g280800 vs. NCBI nr
Match: XP_023511468.1 (uncharacterized protein LOC111776286 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 305 bits (782), Expect = 1.35e-103 Identity = 146/172 (84.88%), Postives = 153/172 (88.95%), Query Frame = 0 Query: 26 LAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAGFLTIFVNRTINNF 85 +A+E+ S D FVHDTCNRF NELY LCI EID D REDLKSNL GFLTIFVN TINNF Sbjct: 1 MAEEDKSTDDTFVHDTCNRFQYNELYKLCIPEIDLDPREDLKSNLTGFLTIFVNHTINNF 60
Query: 86 NDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPGTNVYDLPIMS 145 NDNL+FLQ+EIKSGKLDAETKLMY+KCSESFGMGYT LQESMHILLTQPGTNVYDLP MS Sbjct: 61 NDNLIFLQREIKSGKLDAETKLMYDKCSESFGMGYTKLQESMHILLTQPGTNVYDLPTMS 120
Query: 146 VDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNREASCIP 197 VDK + VCFDDFEDDPIPPEW SRY SWNLVSLILGTSNLIKCNREASCIP Sbjct: 121 VDKRISVCFDDFEDDPIPPEWQSRYKTSWNLVSLILGTSNLIKCNREASCIP 172
BLAST of Csor.00g280800 vs. NCBI nr
Match: KAG6572151.1 (putative pectinesterase/pectinesterase inhibitor 7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 249 bits (637), Expect = 3.20e-77 Identity = 124/196 (63.27%), Postives = 147/196 (75.00%), Query Frame = 0 Query: 2 SSSLSLLGVFTLLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSD 61 SSSL+ LG FTLLLLSIFNPSM +E S FVHDTCN+F +LY LCI EIDSD Sbjct: 307 SSSLTFLGAFTLLLLSIFNPSMSAKVEETRST---FVHDTCNKFQIEQLYKLCIPEIDSD 366
Query: 62 LREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYT 121 REDLKSNL G L IFVN + +NFNDN+ FLQ+EIKSGKL+ ETK+MYN C E F G Sbjct: 367 PREDLKSNLTGILIIFVNHSFSNFNDNIAFLQREIKSGKLNGETKVMYNGCLEDFERGNG 426
Query: 122 DLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLIL 181 DLQE+MHILLTQ G + Y+LP +++ +V C D +E DPIPPEW SRYN SWNL++LI Sbjct: 427 DLQETMHILLTQTGIDAYNLPTINIPNYVSECVDFYEGDPIPPEWQSRYNTSWNLLTLIG 486
Query: 182 GTSNLIKCNREASCIP 197 TSNL+KCN + +CIP Sbjct: 487 VTSNLMKCNHDIACIP 499
BLAST of Csor.00g280800 vs. NCBI nr
Match: KAG6572380.1 (ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 254 bits (649), Expect = 1.73e-75 Identity = 120/169 (71.01%), Postives = 142/169 (84.02%), Query Frame = 0 Query: 23 MFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAGFLTIFVNRTI 82 MF +A+EN S+ FVHDTCN+F +ELY +CI EIDSD REDLKSNL GFL IFVN TI Sbjct: 1 MFAMAEENRSSNCNFVHDTCNKFQYDELYKVCIPEIDSDPREDLKSNLTGFLIIFVNHTI 60
Query: 83 NNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPGTNVYDLP 142 +NFNDN+VFLQ+EI+SGKL+AETKLMYN C ++FGMGY++LQESMHILLTQPGTNVY+LP Sbjct: 61 SNFNDNIVFLQREIQSGKLNAETKLMYNTCLKAFGMGYSNLQESMHILLTQPGTNVYELP 120
Query: 143 IMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIK-CN 190 M VDK + C DDF+ +PIPPEW SRYN SWNLV+L++ TSNLI CN Sbjct: 121 TMDVDKRISTCVDDFDGEPIPPEWQSRYNTSWNLVALMVETSNLITYCN 169
BLAST of Csor.00g280800 vs. ExPASy TrEMBL
Match: A0A5D3BJB5 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004170 PE=4 SV=1) HSP 1 Score: 168 bits (425), Expect = 2.13e-49 Identity = 88/185 (47.57%), Postives = 122/185 (65.95%), Query Frame = 0 Query: 13 LLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAG 72 L+LL I + M A +N + I+ FV TCNR +EL NLC+S+I S+ R DLKSNL G Sbjct: 8 LVLLCILSLCMLTKADQN-TTINDFVRHTCNRT--HELKNLCLSQISSEPRNDLKSNLTG 67
Query: 73 FLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLT 132 L IFVN++I+NF +++ FL+KEI S K+ +TK M C ++F +G +L+E+M IL T Sbjct: 68 LLMIFVNQSISNFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQT 127
Query: 133 QPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNRE 192 + G + LP+ +V CFDDFE P+PPEW SRYN S+ L+ L + NLI CNR+ Sbjct: 128 KTGYDAEQLPVGNVGNLAVECFDDFEGTPVPPEWQSRYNASFALLKLSMAMINLITCNRD 187
Query: 193 ASCIP 197 +CIP Sbjct: 188 YACIP 189
BLAST of Csor.00g280800 vs. ExPASy TrEMBL
Match: A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1) HSP 1 Score: 125 bits (315), Expect = 5.00e-33 Identity = 66/173 (38.15%), Postives = 102/173 (58.96%), Query Frame = 0 Query: 25 VLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAGFLTIFVNRTINN 84 ++ E S + FV++TCN+F + E +CI IDSD +DLK NL+G L IF+N +I+N Sbjct: 1 MMRVEKLSVANSFVNNTCNKFEE-EFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDN 60
Query: 85 FNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPGTNVYDLPIM 144 DN ++L +++K LD + + +N C E + G L+ S+ LL ++ + Sbjct: 61 ATDNHLYLMEQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSLEALLKNDKDDLGLILSD 120
Query: 145 SVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNREASCIP 197 + DK V C DDFE P PP W + Y L++L +GT+NLI+C + A+CIP Sbjct: 121 AFDKIVA-CEDDFESTPEPPSWLAHYLPLRKLLALSMGTANLIQCKKVAACIP 171
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6572377.1 | 5.09e-141 | 100.00 | hypothetical protein SDJN03_29105, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6572388.1 | 1.20e-109 | 87.43 | hypothetical protein SDJN03_29116, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023511468.1 | 1.35e-103 | 84.88 | uncharacterized protein LOC111776286 [Cucurbita pepo subsp. pepo] | [more] |
KAG6572151.1 | 3.20e-77 | 63.27 | putative pectinesterase/pectinesterase inhibitor 7, partial [Cucurbita argyrospe... | [more] |
KAG6572380.1 | 1.73e-75 | 71.01 | ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita arg... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BJB5 | 2.13e-49 | 47.57 | Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A6J1C7W5 | 5.00e-33 | 38.15 | uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR006501 | Pectinesterase inhibitor domain | SMART | SM00856 | PMEI_2 | coord: 33..183 e-value: 0.0083 score: 18.2 |
IPR006501 | Pectinesterase inhibitor domain | TIGRFAM | TIGR01614 | TIGR01614 | coord: 7..185 e-value: 2.2E-14 score: 51.1 |
IPR035513 | Invertase/pectin methylesterase inhibitor domain superfamily | GENE3D | 1.20.140.40 | Invertase/pectin methylesterase inhibitor family protein | coord: 34..189 e-value: 1.2E-10 score: 43.5 |
IPR035513 | Invertase/pectin methylesterase inhibitor domain superfamily | SUPERFAMILY | 101148 | Plant invertase/pectin methylesterase inhibitor | coord: 35..184 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0004857 |
enzyme inhibitor activity |
|