Csor.00g280800 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g280800
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr19: 10779385 .. 10779978 (-)
RNA-Seq ExpressionCsor.00g280800
SyntenyCsor.00g280800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTTCCCTCTCCCTTCTTGGTGTTTTTACCCTTCTTTTGTTATCCATTTTCAATCCCTCTATGTTCGTCTTGGCAAAAGAGAATGGAAGCAACATCGATAAGTTTGTCCATGATACTTGCAACAGATTTCCAGACAACGAACTGTATAACCTTTGCATTTCTGAGATTGATTCAGATCTTCGTGAAGATTTGAAGTCAAATTTGGCAGGTTTTCTAACTATATTTGTGAATCGTACCATCAACAATTTCAATGACAACCTTGTGTTCCTTCAAAAAGAGATAAAGTCAGGAAAGCTAGATGCTGAAACAAAATTGATGTATAACAAGTGTTCAGAATCTTTTGGAATGGGATACACTGATTTGCAAGAGTCAATGCACATATTATTGACCCAACCAGGTACAAACGTGTATGATTTACCGATTATGAGTGTTGATAAACATGTAGGCGTGTGTTTCGATGATTTCGAAGATGACCCTATTCCACCAGAGTGGACGTCTCGTTACAACCGTTCATGGAATTTAGTGTCTCTCATTTTAGGAACGTCTAATCTCATTAAATGTAATCGTGAAGCTTCATGTATCCCTTGA

mRNA sequence

ATGTCTTCTTCCCTCTCCCTTCTTGGTGTTTTTACCCTTCTTTTGTTATCCATTTTCAATCCCTCTATGTTCGTCTTGGCAAAAGAGAATGGAAGCAACATCGATAAGTTTGTCCATGATACTTGCAACAGATTTCCAGACAACGAACTGTATAACCTTTGCATTTCTGAGATTGATTCAGATCTTCGTGAAGATTTGAAGTCAAATTTGGCAGGTTTTCTAACTATATTTGTGAATCGTACCATCAACAATTTCAATGACAACCTTGTGTTCCTTCAAAAAGAGATAAAGTCAGGAAAGCTAGATGCTGAAACAAAATTGATGTATAACAAGTGTTCAGAATCTTTTGGAATGGGATACACTGATTTGCAAGAGTCAATGCACATATTATTGACCCAACCAGGTACAAACGTGTATGATTTACCGATTATGAGTGTTGATAAACATGTAGGCGTGTGTTTCGATGATTTCGAAGATGACCCTATTCCACCAGAGTGGACGTCTCGTTACAACCGTTCATGGAATTTAGTGTCTCTCATTTTAGGAACGTCTAATCTCATTAAATGTAATCGTGAAGCTTCATGTATCCCTTGA

Coding sequence (CDS)

ATGTCTTCTTCCCTCTCCCTTCTTGGTGTTTTTACCCTTCTTTTGTTATCCATTTTCAATCCCTCTATGTTCGTCTTGGCAAAAGAGAATGGAAGCAACATCGATAAGTTTGTCCATGATACTTGCAACAGATTTCCAGACAACGAACTGTATAACCTTTGCATTTCTGAGATTGATTCAGATCTTCGTGAAGATTTGAAGTCAAATTTGGCAGGTTTTCTAACTATATTTGTGAATCGTACCATCAACAATTTCAATGACAACCTTGTGTTCCTTCAAAAAGAGATAAAGTCAGGAAAGCTAGATGCTGAAACAAAATTGATGTATAACAAGTGTTCAGAATCTTTTGGAATGGGATACACTGATTTGCAAGAGTCAATGCACATATTATTGACCCAACCAGGTACAAACGTGTATGATTTACCGATTATGAGTGTTGATAAACATGTAGGCGTGTGTTTCGATGATTTCGAAGATGACCCTATTCCACCAGAGTGGACGTCTCGTTACAACCGTTCATGGAATTTAGTGTCTCTCATTTTAGGAACGTCTAATCTCATTAAATGTAATCGTGAAGCTTCATGTATCCCTTGA

Protein sequence

MSSSLSLLGVFTLLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNREASCIP
Homology
BLAST of Csor.00g280800 vs. NCBI nr
Match: KAG6572377.1 (hypothetical protein SDJN03_29105, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 401 bits (1030), Expect = 5.09e-141
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0

Query: 1   MSSSLSLLGVFTLLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDS 60
           MSSSLSLLGVFTLLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDS
Sbjct: 1   MSSSLSLLGVFTLLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDS 60

Query: 61  DLREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGY 120
           DLREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGY
Sbjct: 61  DLREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGY 120

Query: 121 TDLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLI 180
           TDLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLI
Sbjct: 121 TDLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLI 180

Query: 181 LGTSNLIKCNREASCIP 197
           LGTSNLIKCNREASCIP
Sbjct: 181 LGTSNLIKCNREASCIP 197

BLAST of Csor.00g280800 vs. NCBI nr
Match: KAG6572388.1 (hypothetical protein SDJN03_29116, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 321 bits (822), Expect = 1.20e-109
Identity = 153/175 (87.43%), Postives = 159/175 (90.86%), Query Frame = 0

Query: 23  MFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAGFLTIFVNRTI 82
           MFV A+EN SNIDKFVHDTCNRFPDNELYNLCISEIDSD REDLK NL G LTIFVN TI
Sbjct: 1   MFVTAEENRSNIDKFVHDTCNRFPDNELYNLCISEIDSDPREDLKFNLTGILTIFVNHTI 60

Query: 83  NNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPGTNVYDLP 142
           NNFNDNLVFLQ+EIKS KL+AETKLMY+KCSESFGMGYT LQESMHILLTQPGTNVYDLP
Sbjct: 61  NNFNDNLVFLQQEIKSEKLEAETKLMYDKCSESFGMGYTKLQESMHILLTQPGTNVYDLP 120

Query: 143 IMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNREASCIP 197
            MSVDK + VCFDDFEDDP+PPEW SRY  SWNLVSLILGTSNLIKCN EASCIP
Sbjct: 121 TMSVDKRISVCFDDFEDDPVPPEWQSRYKTSWNLVSLILGTSNLIKCNHEASCIP 175

BLAST of Csor.00g280800 vs. NCBI nr
Match: XP_023511468.1 (uncharacterized protein LOC111776286 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305 bits (782), Expect = 1.35e-103
Identity = 146/172 (84.88%), Postives = 153/172 (88.95%), Query Frame = 0

Query: 26  LAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAGFLTIFVNRTINNF 85
           +A+E+ S  D FVHDTCNRF  NELY LCI EID D REDLKSNL GFLTIFVN TINNF
Sbjct: 1   MAEEDKSTDDTFVHDTCNRFQYNELYKLCIPEIDLDPREDLKSNLTGFLTIFVNHTINNF 60

Query: 86  NDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPGTNVYDLPIMS 145
           NDNL+FLQ+EIKSGKLDAETKLMY+KCSESFGMGYT LQESMHILLTQPGTNVYDLP MS
Sbjct: 61  NDNLIFLQREIKSGKLDAETKLMYDKCSESFGMGYTKLQESMHILLTQPGTNVYDLPTMS 120

Query: 146 VDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNREASCIP 197
           VDK + VCFDDFEDDPIPPEW SRY  SWNLVSLILGTSNLIKCNREASCIP
Sbjct: 121 VDKRISVCFDDFEDDPIPPEWQSRYKTSWNLVSLILGTSNLIKCNREASCIP 172

BLAST of Csor.00g280800 vs. NCBI nr
Match: KAG6572151.1 (putative pectinesterase/pectinesterase inhibitor 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 249 bits (637), Expect = 3.20e-77
Identity = 124/196 (63.27%), Postives = 147/196 (75.00%), Query Frame = 0

Query: 2   SSSLSLLGVFTLLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSD 61
           SSSL+ LG FTLLLLSIFNPSM    +E  S    FVHDTCN+F   +LY LCI EIDSD
Sbjct: 307 SSSLTFLGAFTLLLLSIFNPSMSAKVEETRST---FVHDTCNKFQIEQLYKLCIPEIDSD 366

Query: 62  LREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYT 121
            REDLKSNL G L IFVN + +NFNDN+ FLQ+EIKSGKL+ ETK+MYN C E F  G  
Sbjct: 367 PREDLKSNLTGILIIFVNHSFSNFNDNIAFLQREIKSGKLNGETKVMYNGCLEDFERGNG 426

Query: 122 DLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLIL 181
           DLQE+MHILLTQ G + Y+LP +++  +V  C D +E DPIPPEW SRYN SWNL++LI 
Sbjct: 427 DLQETMHILLTQTGIDAYNLPTINIPNYVSECVDFYEGDPIPPEWQSRYNTSWNLLTLIG 486

Query: 182 GTSNLIKCNREASCIP 197
            TSNL+KCN + +CIP
Sbjct: 487 VTSNLMKCNHDIACIP 499

BLAST of Csor.00g280800 vs. NCBI nr
Match: KAG6572380.1 (ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254 bits (649), Expect = 1.73e-75
Identity = 120/169 (71.01%), Postives = 142/169 (84.02%), Query Frame = 0

Query: 23  MFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAGFLTIFVNRTI 82
           MF +A+EN S+   FVHDTCN+F  +ELY +CI EIDSD REDLKSNL GFL IFVN TI
Sbjct: 1   MFAMAEENRSSNCNFVHDTCNKFQYDELYKVCIPEIDSDPREDLKSNLTGFLIIFVNHTI 60

Query: 83  NNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPGTNVYDLP 142
           +NFNDN+VFLQ+EI+SGKL+AETKLMYN C ++FGMGY++LQESMHILLTQPGTNVY+LP
Sbjct: 61  SNFNDNIVFLQREIQSGKLNAETKLMYNTCLKAFGMGYSNLQESMHILLTQPGTNVYELP 120

Query: 143 IMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIK-CN 190
            M VDK +  C DDF+ +PIPPEW SRYN SWNLV+L++ TSNLI  CN
Sbjct: 121 TMDVDKRISTCVDDFDGEPIPPEWQSRYNTSWNLVALMVETSNLITYCN 169

BLAST of Csor.00g280800 vs. ExPASy TrEMBL
Match: A0A5D3BJB5 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004170 PE=4 SV=1)

HSP 1 Score: 168 bits (425), Expect = 2.13e-49
Identity = 88/185 (47.57%), Postives = 122/185 (65.95%), Query Frame = 0

Query: 13  LLLLSIFNPSMFVLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAG 72
           L+LL I +  M   A +N + I+ FV  TCNR   +EL NLC+S+I S+ R DLKSNL G
Sbjct: 8   LVLLCILSLCMLTKADQN-TTINDFVRHTCNRT--HELKNLCLSQISSEPRNDLKSNLTG 67

Query: 73  FLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLT 132
            L IFVN++I+NF +++ FL+KEI S K+  +TK M   C ++F +G  +L+E+M IL T
Sbjct: 68  LLMIFVNQSISNFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQT 127

Query: 133 QPGTNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNRE 192
           + G +   LP+ +V      CFDDFE  P+PPEW SRYN S+ L+ L +   NLI CNR+
Sbjct: 128 KTGYDAEQLPVGNVGNLAVECFDDFEGTPVPPEWQSRYNASFALLKLSMAMINLITCNRD 187

Query: 193 ASCIP 197
            +CIP
Sbjct: 188 YACIP 189

BLAST of Csor.00g280800 vs. ExPASy TrEMBL
Match: A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1)

HSP 1 Score: 125 bits (315), Expect = 5.00e-33
Identity = 66/173 (38.15%), Postives = 102/173 (58.96%), Query Frame = 0

Query: 25  VLAKENGSNIDKFVHDTCNRFPDNELYNLCISEIDSDLREDLKSNLAGFLTIFVNRTINN 84
           ++  E  S  + FV++TCN+F + E   +CI  IDSD  +DLK NL+G L IF+N +I+N
Sbjct: 1   MMRVEKLSVANSFVNNTCNKFEE-EFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDN 60

Query: 85  FNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPGTNVYDLPIM 144
             DN ++L +++K   LD + +  +N C E +  G   L+ S+  LL     ++  +   
Sbjct: 61  ATDNHLYLMEQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSLEALLKNDKDDLGLILSD 120

Query: 145 SVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNREASCIP 197
           + DK V  C DDFE  P PP W + Y     L++L +GT+NLI+C + A+CIP
Sbjct: 121 AFDKIVA-CEDDFESTPEPPSWLAHYLPLRKLLALSMGTANLIQCKKVAACIP 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6572377.15.09e-141100.00hypothetical protein SDJN03_29105, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6572388.11.20e-10987.43hypothetical protein SDJN03_29116, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023511468.11.35e-10384.88uncharacterized protein LOC111776286 [Cucurbita pepo subsp. pepo][more]
KAG6572151.13.20e-7763.27putative pectinesterase/pectinesterase inhibitor 7, partial [Cucurbita argyrospe... [more]
KAG6572380.11.73e-7571.01ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita arg... [more]
Match NameE-valueIdentityDescription
A0A5D3BJB52.13e-4947.57Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A6J1C7W55.00e-3338.15uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainSMARTSM00856PMEI_2coord: 33..183
e-value: 0.0083
score: 18.2
IPR006501Pectinesterase inhibitor domainTIGRFAMTIGR01614TIGR01614coord: 7..185
e-value: 2.2E-14
score: 51.1
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilyGENE3D1.20.140.40Invertase/pectin methylesterase inhibitor family proteincoord: 34..189
e-value: 1.2E-10
score: 43.5
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilySUPERFAMILY101148Plant invertase/pectin methylesterase inhibitorcoord: 35..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g280800.m01Csor.00g280800.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004857 enzyme inhibitor activity