Csor.00g280180 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g280180
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTranscription factor bHLH117
LocationCsor_Chr19: 10468477 .. 10469436 (-)
RNA-Seq ExpressionCsor.00g280180
SyntenyCsor.00g280180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTTCTGCTGGCGACGATGCTTCCTCCACTGTTTGGGATGATGCTTGCTTCGACGCCATGTTTTCTGGCGTCAGTCTCCAGTCGTTTCTCGCGGGTGGTAGCCAGAGCCACACATTGTTGCCGTCTCTGTTCGGAGGATGCTACGTTGCCGATTCTCTTACTTTTCCTGACGGTATGACGTCGTTGTATCCTCAGGTAAGCTCTAACTTCGTCGCTGAAAGTACCGCCTCTTCCGATGGTCCATTCTTCAAGTTGCCTAAATCCGAGCCGATGAGTGTGTATGAACAAACGGAGACTCAAGAATCCACGTTCCTTTTTCATGATTCGACGTCGTTTCCTCACTTGCCCGATCTCCGTTCCTTGGAGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTCGATTCTGTGATGAATCCGTTGCAGATGGTGGAGCCGATGGTGCGAACATGTGAGGGTTTCCAGAACTTTTTTGTGCCGTACGAGTACAAACACTCGCCGGATTTAACCACTTCTGCTGCCGTGTCTCCTGCTGTTCAAATCCCTCGCAGCGCTTTGGCTCGACAGCGTCGTCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAACTACTGCCATGGGACAAAAAAATGGACATCGCTACAATGCTTGAAGAAGCGTGCAAGTACGTCAAGTTCCTTCAGGCACAACTCCTCGCGCTTCAATCCATGCCCCGTGAATCGGCCATTTCTAGTTATTCAAATAATCAATACATCACCGGTATGTTTGGTGGATTGGAGAGGCTGAATCGAAACCAACTATTGCAAGTTTTAGTTAACTCGCCGGTGGCTCAGACCATGCTTTGTTCTCAGAGTTGTTGCGTTTTCTCGGCAGAACAGTTTGGCCTTATCCAGAAGATCGCGGAGAAACGAGTTCTGCTGCAGCAAATGTCGACATTCCGTCCCAAGCCCTAG

mRNA sequence

ATGGAGACTTCTGCTGGCGACGATGCTTCCTCCACTGTTTGGGATGATGCTTGCTTCGACGCCATGTTTTCTGGCGTCAGTCTCCAGTCGTTTCTCGCGGGTGGTAGCCAGAGCCACACATTGTTGCCGTCTCTGTTCGGAGGATGCTACGTTGCCGATTCTCTTACTTTTCCTGACGGTATGACGTCGTTGTATCCTCAGGTAAGCTCTAACTTCGTCGCTGAAAGTACCGCCTCTTCCGATGGTCCATTCTTCAAGTTGCCTAAATCCGAGCCGATGAGTGTGTATGAACAAACGGAGACTCAAGAATCCACGTTCCTTTTTCATGATTCGACGTCGTTTCCTCACTTGCCCGATCTCCGTTCCTTGGAGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTCGATTCTGTGATGAATCCGTTGCAGATGGTGGAGCCGATGGTGCGAACATGTGAGGGTTTCCAGAACTTTTTTGTGCCGTACGAGTACAAACACTCGCCGGATTTAACCACTTCTGCTGCCGTGTCTCCTGCTGTTCAAATCCCTCGCAGCGCTTTGGCTCGACAGCGTCGTCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAACTACTGCCATGGGACAAAAAAATGGACATCGCTACAATGCTTGAAGAAGCGTGCAAGTACGTCAAGTTCCTTCAGGCACAACTCCTCGCGCTTCAATCCATGCCCCGTGAATCGGCCATTTCTAGTTATTCAAATAATCAATACATCACCGGTATGTTTGGTGGATTGGAGAGGCTGAATCGAAACCAACTATTGCAAGTTTTAGTTAACTCGCCGGTGGCTCAGACCATGCTTTGTTCTCAGAGTTGTTGCGTTTTCTCGGCAGAACAGTTTGGCCTTATCCAGAAGATCGCGGAGAAACGAGTTCTGCTGCAGCAAATGTCGACATTCCGTCCCAAGCCCTAG

Coding sequence (CDS)

ATGGAGACTTCTGCTGGCGACGATGCTTCCTCCACTGTTTGGGATGATGCTTGCTTCGACGCCATGTTTTCTGGCGTCAGTCTCCAGTCGTTTCTCGCGGGTGGTAGCCAGAGCCACACATTGTTGCCGTCTCTGTTCGGAGGATGCTACGTTGCCGATTCTCTTACTTTTCCTGACGGTATGACGTCGTTGTATCCTCAGGTAAGCTCTAACTTCGTCGCTGAAAGTACCGCCTCTTCCGATGGTCCATTCTTCAAGTTGCCTAAATCCGAGCCGATGAGTGTGTATGAACAAACGGAGACTCAAGAATCCACGTTCCTTTTTCATGATTCGACGTCGTTTCCTCACTTGCCCGATCTCCGTTCCTTGGAGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTCGATTCTGTGATGAATCCGTTGCAGATGGTGGAGCCGATGGTGCGAACATGTGAGGGTTTCCAGAACTTTTTTGTGCCGTACGAGTACAAACACTCGCCGGATTTAACCACTTCTGCTGCCGTGTCTCCTGCTGTTCAAATCCCTCGCAGCGCTTTGGCTCGACAGCGTCGTCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAACTACTGCCATGGGACAAAAAAATGGACATCGCTACAATGCTTGAAGAAGCGTGCAAGTACGTCAAGTTCCTTCAGGCACAACTCCTCGCGCTTCAATCCATGCCCCGTGAATCGGCCATTTCTAGTTATTCAAATAATCAATACATCACCGGTATGTTTGGTGGATTGGAGAGGCTGAATCGAAACCAACTATTGCAAGTTTTAGTTAACTCGCCGGTGGCTCAGACCATGCTTTGTTCTCAGAGTTGTTGCGTTTTCTCGGCAGAACAGTTTGGCCTTATCCAGAAGATCGCGGAGAAACGAGTTCTGCTGCAGCAAATGTCGACATTCCGTCCCAAGCCCTAG

Protein sequence

METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDGMTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDLRSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPAVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPRESAISSYSNNQYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQFGLIQKIAEKRVLLQQMSTFRPKP
Homology
BLAST of Csor.00g280180 vs. ExPASy Swiss-Prot
Match: Q9LRJ4 (Transcription factor bHLH117 OS=Arabidopsis thaliana OX=3702 GN=BHLH117 PE=2 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-19
Identity = 73/207 (35.27%), Postives = 110/207 (53.14%), Query Frame = 0

Query: 96  YEQTETQESTFLFHD------STSFPHLPDLRSLEQCSSSFNKRARVDSVMNPLQM-VEP 155
           Y+ T TQ    LFH+      +T F HLPDL+S             +D+V  P  M + P
Sbjct: 63  YDSTHTQ----LFHNDDTTTTTTPFLHLPDLKS-------------IDAVEEPTTMKLFP 122

Query: 156 MVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPAVQIPRSALARQRRQKLSDKTRCLQKLLP 215
            +          +P   +   + T+S+  S +           +R+K+SDK R L+KL+P
Sbjct: 123 SLSPP-------LPAAKRQKLNSTSSSTTSGSPTASNDGGIITKRRKISDKIRSLEKLMP 182

Query: 216 WDKKMDIATMLEEACKYVKFLQAQLLALQSMPRESAISSYSNNQYITGMFGGLERLNRNQ 275
           W++KM++A  LEE+ KY+KFLQ+Q+ +L+ MP ES  ++        G    L+ L R Q
Sbjct: 183 WERKMNLAMTLEESHKYIKFLQSQIASLRWMPLESVYNTAGE----VGETDLLKSLTRQQ 241

Query: 276 LLQVLVNSPVAQTMLCSQSCCVFSAEQ 296
           +LQVL NSP ++ +L S+  CVFS EQ
Sbjct: 243 ILQVLANSPGSRNVLSSRGVCVFSYEQ 241

BLAST of Csor.00g280180 vs. ExPASy Swiss-Prot
Match: A0A0P0WQ90 (Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=LF PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.8e-08
Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 0

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPRES 243
           P++  AR RR+++S++ R LQ+L+P   KMD ATML+EA  Y+KFL++QL AL+++   +
Sbjct: 307 PQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALETLGNGN 366

Query: 244 AISSYSNNQYITG 257
              +  ++ Y TG
Sbjct: 367 GNGNLLHHGYYTG 379

BLAST of Csor.00g280180 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.0e-08
Identity = 29/56 (51.79%), Postives = 44/56 (78.57%), Query Frame = 0

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 240
           P++  ARQRR+++S+K R LQ L+P   KMD A+ML+EA  Y+KFL+AQ+ AL+++
Sbjct: 279 PQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL 334

BLAST of Csor.00g280180 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.9e-07
Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA +YVKFLQ Q+  L S
Sbjct: 247 PQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 301

BLAST of Csor.00g280180 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.7e-07
Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  L S
Sbjct: 276 PQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 330

BLAST of Csor.00g280180 vs. NCBI nr
Match: KAG6572315.1 (Transcription factor basic helix-loop-helix 117, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 632 bits (1630), Expect = 2.11e-228
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0

Query: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60
           METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG
Sbjct: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60

Query: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120
           MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL
Sbjct: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120

Query: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA 180
           RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA
Sbjct: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA 180

Query: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240
           VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP
Sbjct: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240

Query: 241 RESAISSYSNNQYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQFGLIQ 300
           RESAISSYSNNQYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQFGLIQ
Sbjct: 241 RESAISSYSNNQYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQFGLIQ 300

Query: 301 KIAEKRVLLQQMSTFRPKP 319
           KIAEKRVLLQQMSTFRPKP
Sbjct: 301 KIAEKRVLLQQMSTFRPKP 319

BLAST of Csor.00g280180 vs. NCBI nr
Match: XP_023554551.1 (transcription factor bHLH117-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 622 bits (1604), Expect = 1.94e-224
Identity = 315/319 (98.75%), Postives = 316/319 (99.06%), Query Frame = 0

Query: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60
           METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG
Sbjct: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60

Query: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120
           MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQES+FLFHDSTSFPHLPDL
Sbjct: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESSFLFHDSTSFPHLPDL 120

Query: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA 180
           RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYK SPDLTTSAAVSPA
Sbjct: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKLSPDLTTSAAVSPA 180

Query: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240
           VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP
Sbjct: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240

Query: 241 RESAISSYSNNQYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQFGLIQ 300
           RESAISSYSNN YITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ GLIQ
Sbjct: 241 RESAISSYSNNHYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQ 300

Query: 301 KIAEKRVLLQQMSTFRPKP 319
           KIAEKRVLLQQMSTFRPKP
Sbjct: 301 KIAEKRVLLQQMSTFRPKP 319

BLAST of Csor.00g280180 vs. NCBI nr
Match: XP_038889062.1 (transcription factor bHLH117 [Benincasa hispida])

HSP 1 Score: 540 bits (1391), Expect = 6.00e-192
Identity = 278/321 (86.60%), Postives = 292/321 (90.97%), Query Frame = 0

Query: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60
           ME+SAGDDASSTVWDD CF+AMFSGVSLQSFLAGGSQSHT LPSLFGG Y AD+L FPDG
Sbjct: 1   MESSAGDDASSTVWDDTCFNAMFSGVSLQSFLAGGSQSHTFLPSLFGGGYTADALAFPDG 60

Query: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120
            TS YPQ SSNFVAE TASSDG F KLPKSEPM+VY  TET+E+ F  HDS SFPHLPDL
Sbjct: 61  TTSFYPQPSSNFVAECTASSDGYFLKLPKSEPMNVYGNTETEETAFGLHDSMSFPHLPDL 120

Query: 121 RSLEQCSSSFNKRARVD-SVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDL-TTSAAVS 180
           RSLEQCSSSFNKRARVD S++NP QMVEPMVR CEGFQ FF+PY+YK S DL TTSA VS
Sbjct: 121 RSLEQCSSSFNKRARVDYSMLNPSQMVEPMVRGCEGFQKFFMPYQYKPSSDLITTSATVS 180

Query: 181 PAVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240
           P VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQL+ALQS
Sbjct: 181 PTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLVALQS 240

Query: 241 MPRESAISSYSNNQYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQFGL 300
           MP ESAIS+YS+N YITG+FGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ GL
Sbjct: 241 MPCESAISTYSSNHYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGL 300

Query: 301 IQKIAEKRVLLQQMSTFRPKP 319
           IQKIAEKRVLLQQMSTFRPKP
Sbjct: 301 IQKIAEKRVLLQQMSTFRPKP 321

BLAST of Csor.00g280180 vs. NCBI nr
Match: XP_022953002.1 (uncharacterized protein LOC111455517 [Cucurbita moschata])

HSP 1 Score: 507 bits (1305), Expect = 1.00e-178
Identity = 256/263 (97.34%), Postives = 257/263 (97.72%), Query Frame = 0

Query: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60
           METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG
Sbjct: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60

Query: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120
           MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL
Sbjct: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120

Query: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA 180
           RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA
Sbjct: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA 180

Query: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240
           VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP
Sbjct: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240

Query: 241 RESAISSYSNNQYITGMFGGLER 263
           RESAISSYSNN YIT +   L R
Sbjct: 241 RESAISSYSNNHYITELLRFLGR 263

BLAST of Csor.00g280180 vs. NCBI nr
Match: KAG7011926.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506 bits (1303), Expect = 2.02e-178
Identity = 254/255 (99.61%), Postives = 254/255 (99.61%), Query Frame = 0

Query: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60
           METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG
Sbjct: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60

Query: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120
           MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL
Sbjct: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120

Query: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA 180
           RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA
Sbjct: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA 180

Query: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240
           VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP
Sbjct: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240

Query: 241 RESAISSYSNNQYIT 255
           RESAISSYSNN YIT
Sbjct: 241 RESAISSYSNNHYIT 255

BLAST of Csor.00g280180 vs. ExPASy TrEMBL
Match: A0A6J1GLZ9 (uncharacterized protein LOC111455517 OS=Cucurbita moschata OX=3662 GN=LOC111455517 PE=4 SV=1)

HSP 1 Score: 507 bits (1305), Expect = 4.86e-179
Identity = 256/263 (97.34%), Postives = 257/263 (97.72%), Query Frame = 0

Query: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60
           METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG
Sbjct: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60

Query: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120
           MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL
Sbjct: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120

Query: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA 180
           RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA
Sbjct: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA 180

Query: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240
           VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP
Sbjct: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240

Query: 241 RESAISSYSNNQYITGMFGGLER 263
           RESAISSYSNN YIT +   L R
Sbjct: 241 RESAISSYSNNHYITELLRFLGR 263

BLAST of Csor.00g280180 vs. ExPASy TrEMBL
Match: A0A6J1I1T2 (uncharacterized protein LOC111468250 OS=Cucurbita maxima OX=3661 GN=LOC111468250 PE=4 SV=1)

HSP 1 Score: 497 bits (1280), Expect = 2.50e-175
Identity = 252/263 (95.82%), Postives = 254/263 (96.58%), Query Frame = 0

Query: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60
           ME+SAGDD SSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG
Sbjct: 1   MESSAGDDVSSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60

Query: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120
           MTSLYPQVSSNFVAESTASSDGPFFKLPKSEP SVYEQTETQESTFLFHDSTSFPHLPDL
Sbjct: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPTSVYEQTETQESTFLFHDSTSFPHLPDL 120

Query: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPA 180
           RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYK SPDLTTSAAVSPA
Sbjct: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKLSPDLTTSAAVSPA 180

Query: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240
           VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP
Sbjct: 181 VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP 240

Query: 241 RESAISSYSNNQYITGMFGGLER 263
           RESAISSYSNN YIT +   L R
Sbjct: 241 RESAISSYSNNHYITELLRFLGR 263

BLAST of Csor.00g280180 vs. ExPASy TrEMBL
Match: A0A5A7TAD0 (Transcription factor bHLH117 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003960 PE=4 SV=1)

HSP 1 Score: 496 bits (1278), Expect = 3.39e-175
Identity = 262/322 (81.37%), Postives = 276/322 (85.71%), Query Frame = 0

Query: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60
           ME+S GDDASS+VWDDACF+AMFS VS QSFLA G+ S       FGG Y+AD+LTFPD 
Sbjct: 1   MESSPGDDASSSVWDDACFNAMFSDVSFQSFLAAGNHSQ------FGGGYIADALTFPDA 60

Query: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120
            TS YPQ S+NF AE T SSDGPFFKLPKSEPM VYE TET+E  F+ HDSTSFPHLPDL
Sbjct: 61  TTSFYPQPSTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLPDL 120

Query: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPY-EYKHSPDL-TTSAAVS 180
           RSLEQCSSSFNKRARVDS+ NPLQMVEPMVR CEGFQNFFVPY +YK S DL TTSA  S
Sbjct: 121 RSLEQCSSSFNKRARVDSMSNPLQMVEPMVRGCEGFQNFFVPYGQYKTSSDLITTSATAS 180

Query: 181 PAVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240
           P VQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
Sbjct: 181 PTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240

Query: 241 MPRESAISSY-SNNQYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQFG 300
           MP ESA+SSY S+N YITG+FGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ G
Sbjct: 241 MPCESALSSYNSSNPYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300

Query: 301 LIQKIAEKRVLLQQMSTFRPKP 319
           LIQKIAEKRVL     TF PKP
Sbjct: 301 LIQKIAEKRVL----PTFHPKP 312

BLAST of Csor.00g280180 vs. ExPASy TrEMBL
Match: A0A1S3C0Y6 (transcription factor bHLH117 OS=Cucumis melo OX=3656 GN=LOC103495566 PE=4 SV=1)

HSP 1 Score: 492 bits (1266), Expect = 2.28e-173
Identity = 261/322 (81.06%), Postives = 275/322 (85.40%), Query Frame = 0

Query: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60
           ME+S GDDASS+VWDDACF+AMFS VS QSFLA G+ S       FGG Y+AD+LTFPD 
Sbjct: 1   MESSPGDDASSSVWDDACFNAMFSDVSFQSFLAAGNHSQ------FGGGYIADALTFPDA 60

Query: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120
            TS YPQ S+NF AE T SSDGPFFKLPKSEPM VYE TET+E  F+ HDSTSFPHLPDL
Sbjct: 61  TTSFYPQPSTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLPDL 120

Query: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPY-EYKHSPDL-TTSAAVS 180
           RSLEQ SSSFNKRARVDS+ NPLQMVEPMVR CEGFQNFFVPY +YK S DL TTSA  S
Sbjct: 121 RSLEQRSSSFNKRARVDSMSNPLQMVEPMVRGCEGFQNFFVPYGQYKTSSDLITTSATAS 180

Query: 181 PAVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240
           P VQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
Sbjct: 181 PTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240

Query: 241 MPRESAISSY-SNNQYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQFG 300
           MP ESA+SSY S+N YITG+FGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ G
Sbjct: 241 MPCESALSSYNSSNPYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300

Query: 301 LIQKIAEKRVLLQQMSTFRPKP 319
           LIQKIAEKRVL     TF PKP
Sbjct: 301 LIQKIAEKRVL----PTFHPKP 312

BLAST of Csor.00g280180 vs. ExPASy TrEMBL
Match: A0A0A0K6W7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044910 PE=4 SV=1)

HSP 1 Score: 488 bits (1255), Expect = 1.08e-171
Identity = 258/322 (80.12%), Postives = 274/322 (85.09%), Query Frame = 0

Query: 1   METSAGDDASSTVWDD-ACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPD 60
           METS GDDASS+VWDD ACF+AMFS VS QSFLA G+ S       FGG Y+AD+LTFP+
Sbjct: 1   METSPGDDASSSVWDDDACFNAMFSDVSFQSFLAAGNHSQ------FGGGYIADALTFPN 60

Query: 61  GMTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPD 120
             TS YPQ ++NF AE T SSDGPFFKLPKSEPM VYE TET+E  F+ HDSTSFPHLPD
Sbjct: 61  PTTSFYPQPTTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLPD 120

Query: 121 LRSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDL-TTSAAVS 180
           LRSLEQCSSS NKRARVDS+ NPLQM+EPMVR CEGFQ+FFVPY+YK S DL T SA  S
Sbjct: 121 LRSLEQCSSSLNKRARVDSMSNPLQMMEPMVRGCEGFQSFFVPYQYKISSDLITASATAS 180

Query: 181 PAVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240
           P VQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
Sbjct: 181 PTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240

Query: 241 MPRESAISSY-SNNQYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQFG 300
           MP ESAISSY S+N YITG+FGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ G
Sbjct: 241 MPCESAISSYNSSNNYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300

Query: 301 LIQKIAEKRVLLQQMSTFRPKP 319
           LIQKIAEKRVL     TF PKP
Sbjct: 301 LIQKIAEKRVL----PTFHPKP 312

BLAST of Csor.00g280180 vs. TAIR 10
Match: AT3G22100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 9.6e-21
Identity = 73/207 (35.27%), Postives = 110/207 (53.14%), Query Frame = 0

Query: 96  YEQTETQESTFLFHD------STSFPHLPDLRSLEQCSSSFNKRARVDSVMNPLQM-VEP 155
           Y+ T TQ    LFH+      +T F HLPDL+S             +D+V  P  M + P
Sbjct: 63  YDSTHTQ----LFHNDDTTTTTTPFLHLPDLKS-------------IDAVEEPTTMKLFP 122

Query: 156 MVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPAVQIPRSALARQRRQKLSDKTRCLQKLLP 215
            +          +P   +   + T+S+  S +           +R+K+SDK R L+KL+P
Sbjct: 123 SLSPP-------LPAAKRQKLNSTSSSTTSGSPTASNDGGIITKRRKISDKIRSLEKLMP 182

Query: 216 WDKKMDIATMLEEACKYVKFLQAQLLALQSMPRESAISSYSNNQYITGMFGGLERLNRNQ 275
           W++KM++A  LEE+ KY+KFLQ+Q+ +L+ MP ES  ++        G    L+ L R Q
Sbjct: 183 WERKMNLAMTLEESHKYIKFLQSQIASLRWMPLESVYNTAGE----VGETDLLKSLTRQQ 241

Query: 276 LLQVLVNSPVAQTMLCSQSCCVFSAEQ 296
           +LQVL NSP ++ +L S+  CVFS EQ
Sbjct: 243 ILQVLANSPGSRNVLSSRGVCVFSYEQ 241

BLAST of Csor.00g280180 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-09
Identity = 29/56 (51.79%), Postives = 44/56 (78.57%), Query Frame = 0

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 240
           P++  ARQRR+++S+K R LQ L+P   KMD A+ML+EA  Y+KFL+AQ+ AL+++
Sbjct: 279 PQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL 334

BLAST of Csor.00g280180 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 4.2e-08
Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA +YVKFLQ Q+  L S
Sbjct: 247 PQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 301

BLAST of Csor.00g280180 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 56.2 bits (134), Expect = 5.5e-08
Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR+RR+K++++ + LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  L S
Sbjct: 177 PQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 231

BLAST of Csor.00g280180 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 56.2 bits (134), Expect = 5.5e-08
Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  L S
Sbjct: 276 PQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 330

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LRJ41.4e-1935.27Transcription factor bHLH117 OS=Arabidopsis thaliana OX=3702 GN=BHLH117 PE=2 SV=... [more]
A0A0P0WQ901.8e-0842.47Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=... [more]
Q8S3D27.0e-0851.79Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1[more]
Q7XHI95.9e-0752.73Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1[more]
Q84WK07.7e-0752.73Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
KAG6572315.12.11e-228100.00Transcription factor basic helix-loop-helix 117, partial [Cucurbita argyrosperma... [more]
XP_023554551.11.94e-22498.75transcription factor bHLH117-like [Cucurbita pepo subsp. pepo][more]
XP_038889062.16.00e-19286.60transcription factor bHLH117 [Benincasa hispida][more]
XP_022953002.11.00e-17897.34uncharacterized protein LOC111455517 [Cucurbita moschata][more]
KAG7011926.12.02e-17899.61Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
A0A6J1GLZ94.86e-17997.34uncharacterized protein LOC111455517 OS=Cucurbita moschata OX=3662 GN=LOC1114555... [more]
A0A6J1I1T22.50e-17595.82uncharacterized protein LOC111468250 OS=Cucurbita maxima OX=3661 GN=LOC111468250... [more]
A0A5A7TAD03.39e-17581.37Transcription factor bHLH117 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3C0Y62.28e-17381.06transcription factor bHLH117 OS=Cucumis melo OX=3656 GN=LOC103495566 PE=4 SV=1[more]
A0A0A0K6W71.08e-17180.12BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044910 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT3G22100.19.6e-2135.27basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT3G21330.15.0e-0951.79basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT2G14760.14.2e-0852.73basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT1G27740.15.5e-0852.73root hair defective 6-like 4 [more]
AT4G33880.15.5e-0852.73ROOT HAIR DEFECTIVE 6-LIKE 2 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 186..235
e-value: 3.7E-9
score: 46.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 187..230
e-value: 1.5E-5
score: 24.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 180..229
score: 13.274576
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 183..249
e-value: 4.3E-9
score: 38.3
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 182..238
NoneNo IPR availablePANTHERPTHR45914TRANSCRIPTION FACTOR HEC3-RELATEDcoord: 62..315
NoneNo IPR availablePANTHERPTHR45914:SF24TRANSCRIPTION FACTOR BHLH117coord: 62..315

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g280180.m01Csor.00g280180.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0046983 protein dimerization activity