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Csor.00g280030 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGCTCTTCTCAAGCTCGTCGACGCACTACTGTTCCTCGCCTTTCTCCTTCTCGCTTTGGTATCGCCTCTCATCGATTTCCAGGTTATATTTCCTCGAACCCTTTTCCCTCATTTTCTGATCGATCTCAAGACCTGGTACATCCGCCAATCGGGGGACTATATAATGGCCGACTCCCCTCACTTCGTCGTTGGCCTCGTTTGGCTCGAGCTTCTCTTTCAATGGCCTCTCCTGCTTCTCAATCTCTACGCTTTGTTGGCTGCCAAGACATGGTACAACACCACTTGCTTGATATATGGCGTTTCTCTAGTGGCTTCCATGGTATTCTTCTATTCCACCTCCTACCAATTTGGCTACTACTCAAATCTATTGTTTGATTGAATCAATACCCTTTTGCCTGCACATTGTGTTTCTGTTAATTGCACAATGGTTCTGTTGTGAGTTTAGTTTGTAATTGGCACCAAAAAACAAAATCCCATTTCTTGATGCTTGTTGTACTTAGTTTGGGGGTGTTGGATTCTGGATAGCCACATGGATTCTGGATAGCCACATGATGCAAGTTAATATCTGTGATTTGAGATTTCCTCTGCTAATTTTCATGTTGTTTTTCAGAATTTTGGCAAAACTTGTCAATTAATAGCTTGTACTTGATCATCTTAATTAGTGTTTTTAAAAGAAGCATTGAAGAAATTTCTTATCAGGCTGGAAACTGATTTCTTGTTCGATATAATGTGAGATCCCACGTTGGTTGAAGAAGGGAATGAAATATTCGTTATAAGAGTGTGAAAATCTCTTCTTAGTGGACGCATTTTGAACCCTTGAGGGGAAGTCCAGAAGGAATAGCCCAAAGAGAACAATATCTACTGGTAATAGGTTTGAACTATCACAAATGGTATCAAAGCTAGACACCGTGCGGTGTGCCAGCGAGGACGCTGGCTCCCAAGGGGGTGGATTGTGAGATCCCATATTGATTGGAGAAGGGAACAAAACTTTTCTTATAAGGGTGTGAAAACCTTTCCTTAATAATCACGTTTGACAACCTCGAGGGAAGTCCAGATGGATAATCCCGAAGAAGACAACAAGTACATAAACTAAAACTAAGGCTTCAACTTTGAGGACTTTTAGGCAATCAGGCATTTAGATTAGTAGTGCATTTGGGATAAGGTTCAAACATCTTCCGAGTACTCTTTACATATTTCAAACACTTTGATATTCTGCTTGAATACATGTTGCAAAGGATTTGTTCTGCTTCATTTGTTAACCTAGCTGAAGAGATCCACTGGTTTCTGTTCCATTTCTTGTAGGGAAATGTTGCTTATTCTCTGTTTCTTCTGTAATTTCAGTCTGCCATATTGGGTGAAATGGTTGGATCGAACCAAGCATCTAATACTCTAATGACGATATACTACCCCTTCTTGGGTTTGGGAGTTTTGGCCATGCTACGTGGGCTCGTGGCGTGCTCGAGCAAGGCTACGATCACCGGCACCAAACCCTCAAATGGCAGGAAAAAGAGAGCTTAA ATGGGCGCTCTTCTCAAGCTCGTCGACGCACTACTGTTCCTCGCCTTTCTCCTTCTCGCTTTGGTATCGCCTCTCATCGATTTCCAGGTTATATTTCCTCGAACCCTTTTCCCTCATTTTCTGATCGATCTCAAGACCTGGTACATCCGCCAATCGGGGGACTATATAATGGCCGACTCCCCTCACTTCGTCGTTGGCCTCGTTTGGCTCGAGCTTCTCTTTCAATGGCCTCTCCTGCTTCTCAATCTCTACGCTTTGTTGGCTGCCAAGACATGGTACAACACCACTTGCTTGATATATGGCGTTTCTCTAGTGGCTTCCATGTCTGCCATATTGGGTGAAATGGTTGGATCGAACCAAGCATCTAATACTCTAATGACGATATACTACCCCTTCTTGGGTTTGGGAGTTTTGGCCATGCTACGTGGGCTCGTGGCGTGCTCGAGCAAGGCTACGATCACCGGCACCAAACCCTCAAATGGCAGGAAAAAGAGAGCTTAA ATGGGCGCTCTTCTCAAGCTCGTCGACGCACTACTGTTCCTCGCCTTTCTCCTTCTCGCTTTGGTATCGCCTCTCATCGATTTCCAGGTTATATTTCCTCGAACCCTTTTCCCTCATTTTCTGATCGATCTCAAGACCTGGTACATCCGCCAATCGGGGGACTATATAATGGCCGACTCCCCTCACTTCGTCGTTGGCCTCGTTTGGCTCGAGCTTCTCTTTCAATGGCCTCTCCTGCTTCTCAATCTCTACGCTTTGTTGGCTGCCAAGACATGGTACAACACCACTTGCTTGATATATGGCGTTTCTCTAGTGGCTTCCATGTCTGCCATATTGGGTGAAATGGTTGGATCGAACCAAGCATCTAATACTCTAATGACGATATACTACCCCTTCTTGGGTTTGGGAGTTTTGGCCATGCTACGTGGGCTCGTGGCGTGCTCGAGCAAGGCTACGATCACCGGCACCAAACCCTCAAATGGCAGGAAAAAGAGAGCTTAA MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADSPHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNQASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA Homology
BLAST of Csor.00g280030 vs. ExPASy Swiss-Prot
Match: Q6DFQ5 (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.4e-06 Identity = 41/154 (26.62%), Postives = 73/154 (47.40%), Query Frame = 0
BLAST of Csor.00g280030 vs. ExPASy Swiss-Prot
Match: Q3MHW7 (Sigma intracellular receptor 2 OS=Bos taurus OX=9913 GN=TMEM97 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 5.4e-04 Identity = 32/107 (29.91%), Postives = 54/107 (50.47%), Query Frame = 0
BLAST of Csor.00g280030 vs. NCBI nr
Match: KAG6572300.1 (Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 317 bits (813), Expect = 5.93e-109 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Csor.00g280030 vs. NCBI nr
Match: KAG7011913.1 (Transmembrane protein 97, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 316 bits (809), Expect = 2.41e-108 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Csor.00g280030 vs. NCBI nr
Match: XP_022952624.1 (sigma intracellular receptor 2-like [Cucurbita moschata]) HSP 1 Score: 313 bits (802), Expect = 2.82e-107 Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of Csor.00g280030 vs. NCBI nr
Match: XP_022969277.1 (sigma intracellular receptor 2-like [Cucurbita maxima]) HSP 1 Score: 307 bits (786), Expect = 7.76e-105 Identity = 160/166 (96.39%), Postives = 163/166 (98.19%), Query Frame = 0
BLAST of Csor.00g280030 vs. NCBI nr
Match: XP_038887415.1 (sigma intracellular receptor 2 [Benincasa hispida]) HSP 1 Score: 274 bits (700), Expect = 9.99e-92 Identity = 141/166 (84.94%), Postives = 154/166 (92.77%), Query Frame = 0
BLAST of Csor.00g280030 vs. ExPASy TrEMBL
Match: A0A6J1GM86 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455258 PE=4 SV=1) HSP 1 Score: 313 bits (802), Expect = 1.37e-107 Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of Csor.00g280030 vs. ExPASy TrEMBL
Match: A0A6J1HVX1 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 PE=4 SV=1) HSP 1 Score: 307 bits (786), Expect = 3.76e-105 Identity = 160/166 (96.39%), Postives = 163/166 (98.19%), Query Frame = 0
BLAST of Csor.00g280030 vs. ExPASy TrEMBL
Match: A0A0A0K5K2 (EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4 SV=1) HSP 1 Score: 265 bits (677), Expect = 1.55e-88 Identity = 134/166 (80.72%), Postives = 151/166 (90.96%), Query Frame = 0
BLAST of Csor.00g280030 vs. ExPASy TrEMBL
Match: A0A6J1JIQ0 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 PE=4 SV=1) HSP 1 Score: 263 bits (672), Expect = 8.94e-88 Identity = 129/166 (77.71%), Postives = 152/166 (91.57%), Query Frame = 0
BLAST of Csor.00g280030 vs. ExPASy TrEMBL
Match: A0A6J1EVW1 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437055 PE=4 SV=1) HSP 1 Score: 257 bits (656), Expect = 2.45e-85 Identity = 127/166 (76.51%), Postives = 148/166 (89.16%), Query Frame = 0
BLAST of Csor.00g280030 vs. TAIR 10
Match: AT2G32380.1 (Transmembrane protein 97, predicted ) HSP 1 Score: 175.6 bits (444), Expect = 3.2e-44 Identity = 89/168 (52.98%), Postives = 128/168 (76.19%), Query Frame = 0
BLAST of Csor.00g280030 vs. TAIR 10
Match: AT1G05210.1 (Transmembrane protein 97, predicted ) HSP 1 Score: 172.2 bits (435), Expect = 3.6e-43 Identity = 89/165 (53.94%), Postives = 122/165 (73.94%), Query Frame = 0
BLAST of Csor.00g280030 vs. TAIR 10
Match: AT1G05220.1 (Transmembrane protein 97, predicted ) HSP 1 Score: 148.3 bits (373), Expect = 5.5e-36 Identity = 75/150 (50.00%), Postives = 108/150 (72.00%), Query Frame = 0
BLAST of Csor.00g280030 vs. TAIR 10
Match: AT1G05220.2 (Transmembrane protein 97, predicted ) HSP 1 Score: 148.3 bits (373), Expect = 5.5e-36 Identity = 75/150 (50.00%), Postives = 108/150 (72.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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