Csor.00g279510 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGCGGTTGGCGGCGGCCGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACAGCGCCGGCGGCGGAGCTGACGGCGGAGGTAGGGTAATCGATGGCAACCGGAGAGACGGAAATTCATATGGGTTTTCAATGATTTACACTCTCCTTCGAACCCCATTTTCGCTTCTCTCTTGCTTCTCTCAACCTCACGTTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGCGATATGCAATCTTAATGTAA ATGTGGCGGTTGGCGGCGGCCGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACAGCGCCGGCGGCGGAGCTGACGGCGGAGGTAGGGTAATCGATGGCAACCGGAGAGACGGAAATTCATATGGGTTTTCAATGATTTACACTCTCCTTCGAACCCCATTTTCGCTTCTCTCTTGCTTCTCTCAACCTCACGTTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGCGATATGCAATCTTAATGTAA ATGTGGCGGTTGGCGGCGGCCGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACAGCGCCGGCGGCGGAGCTGACGGCGGAGGTAGGGTAATCGATGGCAACCGGAGAGACGGAAATTCATATGGGTTTTCAATGATTTACACTCTCCTTCGAACCCCATTTTCGCTTCTCTCTTGCTTCTCTCAACCTCACGTTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGCGATATGCAATCTTAATGTAA MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM Homology
BLAST of Csor.00g279510 vs. NCBI nr
Match: KAG6572248.1 (hypothetical protein SDJN03_28976, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011878.1 hypothetical protein SDJN02_26785, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 220 bits (560), Expect = 2.79e-72 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Csor.00g279510 vs. NCBI nr
Match: XP_022969305.1 (uncharacterized protein LOC111468352 [Cucurbita maxima]) HSP 1 Score: 214 bits (544), Expect = 7.72e-70 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Csor.00g279510 vs. NCBI nr
Match: XP_023554647.1 (uncharacterized protein LOC111811837 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 211 bits (536), Expect = 1.28e-68 Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0
BLAST of Csor.00g279510 vs. NCBI nr
Match: XP_038888385.1 (uncharacterized protein LOC120078235 [Benincasa hispida]) HSP 1 Score: 199 bits (506), Expect = 5.68e-64 Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of Csor.00g279510 vs. NCBI nr
Match: XP_031744820.1 (uncharacterized protein LOC101211016 [Cucumis sativus] >KAE8645720.1 hypothetical protein Csa_020583 [Cucumis sativus]) HSP 1 Score: 199 bits (505), Expect = 7.10e-64 Identity = 99/110 (90.00%), Postives = 104/110 (94.55%), Query Frame = 0
BLAST of Csor.00g279510 vs. ExPASy TrEMBL
Match: A0A6J1HZK3 (uncharacterized protein LOC111468352 OS=Cucurbita maxima OX=3661 GN=LOC111468352 PE=4 SV=1) HSP 1 Score: 214 bits (544), Expect = 3.74e-70 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Csor.00g279510 vs. ExPASy TrEMBL
Match: A0A5D3BTM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00140 PE=4 SV=1) HSP 1 Score: 198 bits (504), Expect = 5.05e-64 Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 0
BLAST of Csor.00g279510 vs. ExPASy TrEMBL
Match: A0A6J1C6U0 (uncharacterized protein LOC111007908 OS=Momordica charantia OX=3673 GN=LOC111007908 PE=4 SV=1) HSP 1 Score: 182 bits (461), Expect = 1.66e-57 Identity = 89/107 (83.18%), Postives = 96/107 (89.72%), Query Frame = 0
BLAST of Csor.00g279510 vs. ExPASy TrEMBL
Match: A0A1S3C134 (uncharacterized protein LOC103495667 OS=Cucumis melo OX=3656 GN=LOC103495667 PE=4 SV=1) HSP 1 Score: 181 bits (459), Expect = 2.00e-56 Identity = 90/106 (84.91%), Postives = 96/106 (90.57%), Query Frame = 0
BLAST of Csor.00g279510 vs. ExPASy TrEMBL
Match: A0A6J1ER34 (uncharacterized protein LOC111437033 OS=Cucurbita moschata OX=3662 GN=LOC111437033 PE=4 SV=1) HSP 1 Score: 178 bits (452), Expect = 4.04e-56 Identity = 90/108 (83.33%), Postives = 96/108 (88.89%), Query Frame = 0
BLAST of Csor.00g279510 vs. TAIR 10
Match: AT5G35732.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 110.5 bits (275), Expect = 8.2e-25 Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 0
BLAST of Csor.00g279510 vs. TAIR 10
Match: AT2G04795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 97.1 bits (240), Expect = 9.4e-21 Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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