Csor.00g278120 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g278120
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ubiquitin-conjugating enzyme E2
Location	Csor_Chr19: 9408238 .. 9410906 (+)
RNA-Seq Expression	Csor.00g278120
Synteny	Csor.00g278120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTCTGTTCCCACTTTGAGAAGTGCAAAACCAATTGCCATGCATTGGTTCCTATACCCTCCCCTTTTTGGGCATTATATAGACCATTTCAAGCCCTTTGCACTCTGTAGAATCAAAAGCTTAGAGCTTGCAACAATGGCGTCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAGAGAGACCCGCCGACATCTTGCAGCGCAGGTGATTGATTAGGGCAACGTTTTGCTCGTTTGATAATGTTCTTGTTTTTTTCGGTTTCTTCGTCGTGTAAGAAGTGTTTGATAATGGTCTTTGTCTTTTTTTTTTTTTTTGTTTAGAAAGTTGTGGAGAATTTTTGAAAATAATAATGTTTTCGGGTTTTTGGTGTTAAAGAATTAGTGTTTAATCGTTGTTTGTTTTGTTATCGGGTTTCTATCGATGTTTTAAAAAAGAATAAACGAAAAAAATTTAAATTTAAAACGTATCCAAATGGATTTAGAAACTAAAATTTTTGTACGTTTTTTCCTTTTTTTTTTTTTTTTTGTGTTAAATAATTACGAGGTGAAAATTAGAAGATCAAGCTGTGAGATCCCACATCGGTTGGAGAGGAGAATGAGATTCGTTATAAGAGTGTGGAAACCTCTCCCTAACAAACCTGTTTTAAAACTGTGAGGCTGACGGTGGGATGCGTAACTAGCTAAAATGGACAATATCTGTTAGTGGTGAACTTGGGCTGTTACAAATGGTATTAGAGCCAAACACCGAGCGGTATGCCAGCGAGGACGCTGGCCCCCAAGGGGGTGGATTGGGAGATCCCATATCGGTTGGAGAGGAGAACAAAACATCCTTATAAGAGTATGGAAACCTCTCCTTAACATATACGTTTTAAAACAGTGAGACTGGCAATAATACGTGACGGGCCAAAGCGGACTATATATGTTAGCGGTGAGGTTCGGTTGTTACAAATGGTATCAGAGCCAGACGCCGAGTGACGTGCTAGCGAGGATGCTGGCCCCTAAGAGGGTGGATTGTGAGATCCCATAGTAGTTGGAGAGGAGAACGAAACATTCCTTATAAGAGTACGGAAACCTCTCCCTAACATATGTGTTTTAAAACAGTGAGGCTGACAACAATACGTAAAGGGTTAAAGCGGACAATATCTGTTAGCGGTGGGGTTGAACTATTACAAATGGTATCAGAACCAGACACCGAGTGACGTGCCAGCGAAAACGCTGGCTCTCAAGGGGGGTGGATTGTGAGATCCCACAACAGTTAGAGAGGAAAACGAAACATTCCTTGTAAGAGTATGGAAACCTCTCCCTAACATACGCGTTTTAAAACCGTGAGGCTGATAACAACACATAACAGGCCAAAGTGGACAATATCTGTTAGCCATGGGGTTGGACTGTTACAAATGGTATCAGAGCCAGACATCGAGTAACATGTCAGCGAGGACGCTGGTCCCCAAGGGAGGTGGATTGTGAGATCCCACAACGGTTGGAGAGGAAAACGAAACATTCTTTATAAGGGTATAGAAACTTCTCCCTAAGAGACGTATTTTAAAATCGTAAGACTTGACGACGACACGTAGCAGGCCAAAACAGACAATATCTACTAACAGTGGACTTGAACGGTTAGACGAACGATTTATTTATTATTATTTGAACAAAAGCTTACGTTATGGTGCATTTTTCAGGGCCTGTGGCAGAGGATATGTTCCATTGGCAAGCAACCATTCTTGGTCCTTGTGACAGTCCCTATGCCGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCCTTCAAACCTCCTAAGGTAACCCATTTGTAGGGCTTTTTTCCTCTCGTTTAGGGTCGGGTTTACGTAACTTTTAAAAACGTCAAGTTTAAGTTCGAGATTCAAACACTAATAATCGCAGGTTGCCTTTAAGACGAAGGTGTTCCATCCCAACATAAACAACAACGGCAACATTTGCTTGGATATCCTCAAAGAACAATGGAGTCCGGCCCTCACAATATCAAAGGTTTGAATCGTTAATATTATTTCATCACAACAGAGTCATTTGGATCCCACGAGTTAAAATTAATATCTGAACTTAACATTTGAAGAAGAACATCAACCCAGGGTGTTTATAGATCGAAAATTAGGTATTGGCTAGGACGTTTTTTAGATCAACCCTACCCAACCCGATTGTTCCAATTGCAAATTTATTTAACCGAAACAACCCATATTACATAATGAACTCAACCCAACCCAACCATAAATTTTTTTGTTAGACTGATTCAAATAAGTTCATACCCGAACCCAACCCACGGTTTGGGTCAGGTTGATCAGATTTTTCGAGCCATCGAATTCTTTAAACAACCCTAATCCAAACAAATTATTCAAAACATTATTACGTGAAATCGATTCAAAAGAACGTTAATTCAATCCCTTACAATTTTTCTTTTAATCTTAATTTGATTCATATCGATACTCGAGAACGTCGAGCGTTATTCTCATTTATCTATTTATTTATTTTTTGTTGTAGGTTTTGCTCTCAATTTGCTCACTATTGACTGACCCAAACCCGGATGATCCATTGGTTCCTGAGATTGCTCATATGTGCAAGTCTGATAAGGTCAAATATGAATCCCAAGCTAGGAGCTGGACCCACAAATATGCAATGGGTTAA

mRNA sequence

ATGTATTCTGTTCCCACTTTGAGAAGTGCAAAACCAATTGCCATGCATTGGTTCCTATACCCTCCCCTTTTTGGGCATTATATAGACCATTTCAAGCCCTTTGCACTCTGTAGAATCAAAAGCTTAGAGCTTGCAACAATGGCGTCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAGAGAGACCCGCCGACATCTTGCAGCGCAGGGCCTGTGGCAGAGGATATGTTCCATTGGCAAGCAACCATTCTTGGTCCTTGTGACAGTCCCTATGCCGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCCTTCAAACCTCCTAAGGTTGCCTTTAAGACGAAGGTGTTCCATCCCAACATAAACAACAACGGCAACATTTGCTTGGATATCCTCAAAGAACAATGGAGTCCGGCCCTCACAATATCAAAGGTTTTGCTCTCAATTTGCTCACTATTGACTGACCCAAACCCGGATGATCCATTGGTTCCTGAGATTGCTCATATGTGCAAGTCTGATAAGGTCAAATATGAATCCCAAGCTAGGAGCTGGACCCACAAATATGCAATGGGTTAA

Coding sequence (CDS)

ATGTATTCTGTTCCCACTTTGAGAAGTGCAAAACCAATTGCCATGCATTGGTTCCTATACCCTCCCCTTTTTGGGCATTATATAGACCATTTCAAGCCCTTTGCACTCTGTAGAATCAAAAGCTTAGAGCTTGCAACAATGGCGTCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAGAGAGACCCGCCGACATCTTGCAGCGCAGGGCCTGTGGCAGAGGATATGTTCCATTGGCAAGCAACCATTCTTGGTCCTTGTGACAGTCCCTATGCCGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCCTTCAAACCTCCTAAGGTTGCCTTTAAGACGAAGGTGTTCCATCCCAACATAAACAACAACGGCAACATTTGCTTGGATATCCTCAAAGAACAATGGAGTCCGGCCCTCACAATATCAAAGGTTTTGCTCTCAATTTGCTCACTATTGACTGACCCAAACCCGGATGATCCATTGGTTCCTGAGATTGCTCATATGTGCAAGTCTGATAAGGTCAAATATGAATCCCAAGCTAGGAGCTGGACCCACAAATATGCAATGGGTTAA

Protein sequence

MYSVPTLRSAKPIAMHWFLYPPLFGHYIDHFKPFALCRIKSLELATMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDYPFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKSDKVKYESQARSWTHKYAMG

Homology

[Close]

BLAST of Csor.00g278120 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 8.7e-78
Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 195
           PEIAHM K+DK KYES ARSWT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 8.7e-78
Identity = 134/148 (90.54%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPN+N+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 195
           PEIAHM K+D+ KYES ARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.1e-77
Identity = 135/148 (91.22%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQAT++GP DSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVA KTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 195
           PEIAHM K+D+ KYES ARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.5e-77
Identity = 135/148 (91.22%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 195
           PEIAHM K+DK KYES AR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.9e-77
Identity = 134/148 (90.54%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP DSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 195
           PEIAHM K+D+ KYE+ ARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. NCBI nr
Match: KAG6572109.1 (Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 415 bits (1067), Expect = 9.19e-147
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MYSVPTLRSAKPIAMHWFLYPPLFGHYIDHFKPFALCRIKSLELATMASKRILKELKDLQ 60
           MYSVPTLRSAKPIAMHWFLYPPLFGHYIDHFKPFALCRIKSLELATMASKRILKELKDLQ
Sbjct: 1   MYSVPTLRSAKPIAMHWFLYPPLFGHYIDHFKPFALCRIKSLELATMASKRILKELKDLQ 60

Query: 61  RDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDYPFKPPKVAFKTKVF 120
           RDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDYPFKPPKVAFKTKVF
Sbjct: 61  RDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDYPFKPPKVAFKTKVF 120

Query: 121 HPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKSDKVKY 180
           HPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKSDKVKY
Sbjct: 121 HPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKSDKVKY 180

Query: 181 ESQARSWTHKYAMG 194
           ESQARSWTHKYAMG
Sbjct: 181 ESQARSWTHKYAMG 194

[Close]

BLAST of Csor.00g278120 vs. NCBI nr
Match: XP_022952480.1 (ubiquitin-conjugating enzyme E2 5B-like [Cucurbita moschata] >XP_022969516.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita maxima] >XP_023553722.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316 bits (810), Expect = 2.82e-108
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 194
           PEIAHMCKSDKVKYESQARSWTHKYAMG
Sbjct: 121 PEIAHMCKSDKVKYESQARSWTHKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. NCBI nr
Match: XP_004144844.1 (ubiquitin-conjugating enzyme E2 28 [Cucumis sativus] >KGN43247.1 hypothetical protein Csa_020408 [Cucumis sativus])

HSP 1 Score: 303 bits (775), Expect = 6.11e-103
Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATI+GP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 194
           PEIAHMCK+DK+KYES ARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. NCBI nr
Match: ONH92243.1 (hypothetical protein PRUPE_8G165100 [Prunus persica])

HSP 1 Score: 303 bits (777), Expect = 7.44e-103
Identity = 142/152 (93.42%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 43  ELATMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHF 102
           E A+MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATI+GP DSPY+GGVFLVTIHF
Sbjct: 23  ETASMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHF 82

Query: 103 PPDYPFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPD 162
           PPDYPFKPPKVAF+TKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPD
Sbjct: 83  PPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPD 142

Query: 163 DPLVPEIAHMCKSDKVKYESQARSWTHKYAMG 194
           DPLVPEIAHMCK+DKVKYES ARSWT KYAMG
Sbjct: 143 DPLVPEIAHMCKTDKVKYESTARSWTQKYAMG 174

[Close]

BLAST of Csor.00g278120 vs. NCBI nr
Match: XP_031265722.1 (ubiquitin-conjugating enzyme E2 28-like [Pistacia vera])

HSP 1 Score: 302 bits (774), Expect = 8.68e-103
Identity = 142/148 (95.95%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATI+GP DSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 194
           PEIAHMCKSDKVKYES ARSWT KYAMG
Sbjct: 121 PEIAHMCKSDKVKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. ExPASy TrEMBL
Match: A0A6J1HY08 (ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita maxima OX=3661 GN=LOC111468491 PE=3 SV=1)

HSP 1 Score: 316 bits (810), Expect = 1.37e-108
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 194
           PEIAHMCKSDKVKYESQARSWTHKYAMG
Sbjct: 121 PEIAHMCKSDKVKYESQARSWTHKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. ExPASy TrEMBL
Match: A0A6J1GLW1 (ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita moschata OX=3662 GN=LOC111455155 PE=3 SV=1)

HSP 1 Score: 316 bits (810), Expect = 1.37e-108
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 194
           PEIAHMCKSDKVKYESQARSWTHKYAMG
Sbjct: 121 PEIAHMCKSDKVKYESQARSWTHKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. ExPASy TrEMBL
Match: A0A5B7BVZ9 (Putative ubiquitin-conjugating enzyme E2 10-like OS=Davidia involucrata OX=16924 GN=Din_042129 PE=3 SV=1)

HSP 1 Score: 305 bits (781), Expect = 1.59e-103
Identity = 149/176 (84.66%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 22  PLFGHYIDHFKPFALC---RIKSLELATMASKRILKELKDLQRDPPTSCSAGPVAEDMFH 81
           PLF H   H   F+L     I +L++A MASKRILKELKDLQRDPPTSCSAGPVAEDMFH
Sbjct: 18  PLFSH--SHPLGFSLVSHFEISTLKIALMASKRILKELKDLQRDPPTSCSAGPVAEDMFH 77

Query: 82  WQATILGPCDSPYAGGVFLVTIHFPPDYPFKPPKVAFKTKVFHPNINNNGNICLDILKEQ 141
           WQATI+GP DSPYAGGVFLVTI FPPDYPFKPPKVAF+TK+FHPNIN+NGNICLDILKEQ
Sbjct: 78  WQATIIGPNDSPYAGGVFLVTIQFPPDYPFKPPKVAFRTKLFHPNINSNGNICLDILKEQ 137

Query: 142 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKSDKVKYESQARSWTHKYAMG 194
           WSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+CKSDKVKYES ARSWT KYAMG
Sbjct: 138 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHICKSDKVKYESTARSWTQKYAMG 191

[Close]

BLAST of Csor.00g278120 vs. ExPASy TrEMBL
Match: A0A0A0K4N5 (Ubiquitin carrier protein OS=Cucumis sativus OX=3659 GN=Csa_7G011870 PE=3 SV=1)

HSP 1 Score: 303 bits (775), Expect = 2.96e-103
Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATI+GP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 194
           PEIAHMCK+DK+KYES ARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. ExPASy TrEMBL
Match: A0A251MYW6 (UBC core domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_8G165100 PE=3 SV=1)

HSP 1 Score: 303 bits (777), Expect = 3.60e-103
Identity = 142/152 (93.42%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 43  ELATMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHF 102
           E A+MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATI+GP DSPY+GGVFLVTIHF
Sbjct: 23  ETASMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHF 82

Query: 103 PPDYPFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPD 162
           PPDYPFKPPKVAF+TKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPD
Sbjct: 83  PPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPD 142

Query: 163 DPLVPEIAHMCKSDKVKYESQARSWTHKYAMG 194
           DPLVPEIAHMCK+DKVKYES ARSWT KYAMG
Sbjct: 143 DPLVPEIAHMCKTDKVKYESTARSWTQKYAMG 174

[Close]

BLAST of Csor.00g278120 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 291.2 bits (744), Expect = 6.2e-79
Identity = 134/148 (90.54%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPN+N+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 195
           PEIAHM K+D+ KYES ARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 291.2 bits (744), Expect = 6.2e-79
Identity = 134/148 (90.54%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPN+N+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 195
           PEIAHM K+D+ KYES ARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 291.2 bits (744), Expect = 6.2e-79
Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 195
           PEIAHM K+DK KYES ARSWT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. TAIR 10
Match: AT5G53300.2 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 291.2 bits (744), Expect = 6.2e-79
Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 195
           PEIAHM K+DK KYES ARSWT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g278120 vs. TAIR 10
Match: AT5G53300.4 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 291.2 bits (744), Expect = 6.2e-79
Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 47  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATILGPCDSPYAGGVFLVTIHFPPDY 106
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 107 PFKPPKVAFKTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 166
           PFKPPKVAF+TKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 167 PEIAHMCKSDKVKYESQARSWTHKYAMG 195
           PEIAHM K+DK KYES ARSWT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

The following BLAST results are available for this feature:

BLAST of Csor.00g278120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35133	8.7e-78	91.89	Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1...	[more]
Q94F47	8.7e-78	90.54	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
Q8S919	1.1e-77	91.22	Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=U...	[more]
P35132	1.5e-77	91.22	SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1	[more]
P35135	1.9e-77	90.54	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of Csor.00g278120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572109.1	9.19e-147	100.00	Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022952480.1	2.82e-108	100.00	ubiquitin-conjugating enzyme E2 5B-like [Cucurbita moschata] >XP_022969516.1 ubi...	[more]
XP_004144844.1	6.11e-103	94.59	ubiquitin-conjugating enzyme E2 28 [Cucumis sativus] >KGN43247.1 hypothetical pr...	[more]
ONH92243.1	7.44e-103	93.42	hypothetical protein PRUPE_8G165100 [Prunus persica]	[more]
XP_031265722.1	8.68e-103	95.95	ubiquitin-conjugating enzyme E2 28-like [Pistacia vera]	[more]

BLAST of Csor.00g278120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HY08	1.37e-108	100.00	ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]
A0A6J1GLW1	1.37e-108	100.00	ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A5B7BVZ9	1.59e-103	84.66	Putative ubiquitin-conjugating enzyme E2 10-like OS=Davidia involucrata OX=16924...	[more]
A0A0A0K4N5	2.96e-103	94.59	Ubiquitin carrier protein OS=Cucumis sativus OX=3659 GN=Csa_7G011870 PE=3 SV=1	[more]
A0A251MYW6	3.60e-103	93.42	UBC core domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_8G165100 P...	[more]

BLAST of Csor.00g278120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64230.1	6.2e-79	90.54	ubiquitin-conjugating enzyme 28	[more]
AT1G64230.2	6.2e-79	90.54	ubiquitin-conjugating enzyme 28	[more]
AT5G53300.1	6.2e-79	91.89	ubiquitin-conjugating enzyme 10	[more]
AT5G53300.2	6.2e-79	91.89	ubiquitin-conjugating enzyme 10	[more]
AT5G53300.4	6.2e-79	91.89	ubiquitin-conjugating enzyme 10	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..62
None	No IPR available	SMART	SM00212	ubc_7	coord: 50..193 e-value: 1.4E-75 score: 267.1
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 49..191
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 49..191
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 51..187 e-value: 1.0E-51 score: 174.3
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 47..193 score: 60.136028
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 49..188 e-value: 3.86421E-71 score: 210.136
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 39..194 e-value: 3.7E-72 score: 243.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 33..193
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 120..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g278120.m01	Csor.00g278120.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity