Csor.00g277570 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g277570
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionProtein kinase domain-containing protein
LocationCsor_Chr19: 9102753 .. 9103016 (+)
RNA-Seq ExpressionCsor.00g277570
SyntenyCsor.00g277570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCACTACAGTGGATTTATCGGTTAATTGTTATGATGATGTTGTGTTCGAGTATAGGAGAGGTCTATCTCGATACTACTCGGGAAAATCTAGGTCATTTGCTTGCATAGCTGACGTTCGATGCGTAGAAGACTTGAAGAAACCGAAGCATCCAGAAGCTAAGAAAAGGAAGAAACAATCGGACTGCAAAGAAATTCACGTCCCTCCTTATCACTGTCGAAGAATTTCTTCTCAGTGTTCCATTCCGTTCTTTACTGCATGA

mRNA sequence

ATGGGCACTACAGTGGATTTATCGGTTAATTGTTATGATGATGTTGTGTTCGAGTATAGGAGAGGTCTATCTCGATACTACTCGGGAAAATCTAGGTCATTTGCTTGCATAGCTGACGTTCGATGCGTAGAAGACTTGAAGAAACCGAAGCATCCAGAAGCTAAGAAAAGGAAGAAACAATCGGACTGCAAAGAAATTCACGTCCCTCCTTATCACTGTCGAAGAATTTCTTCTCAGTGTTCCATTCCGTTCTTTACTGCATGA

Coding sequence (CDS)

ATGGGCACTACAGTGGATTTATCGGTTAATTGTTATGATGATGTTGTGTTCGAGTATAGGAGAGGTCTATCTCGATACTACTCGGGAAAATCTAGGTCATTTGCTTGCATAGCTGACGTTCGATGCGTAGAAGACTTGAAGAAACCGAAGCATCCAGAAGCTAAGAAAAGGAAGAAACAATCGGACTGCAAAGAAATTCACGTCCCTCCTTATCACTGTCGAAGAATTTCTTCTCAGTGTTCCATTCCGTTCTTTACTGCATGA

Protein sequence

MGTTVDLSVNCYDDVVFEYRRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEIHVPPYHCRRISSQCSIPFFTA
Homology
BLAST of Csor.00g277570 vs. NCBI nr
Match: KAG6572054.1 (hypothetical protein SDJN03_28782, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011720.1 hypothetical protein SDJN02_26626, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 185 bits (470), Expect = 3.51e-59
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 1  MGTTVDLSVNCYDDVVFEYRRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQ 60
          MGTTVDLSVNCYDDVVFEYRRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQ
Sbjct: 1  MGTTVDLSVNCYDDVVFEYRRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQ 60

Query: 61 SDCKEIHVPPYHCRRISSQCSIPFFTA 87
          SDCKEIHVPPYHCRRISSQCSIPFFTA
Sbjct: 61 SDCKEIHVPPYHCRRISSQCSIPFFTA 87

BLAST of Csor.00g277570 vs. NCBI nr
Match: KAG7022280.1 (hypothetical protein SDJN02_16011, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 125 bits (315), Expect = 1.24e-33
Identity = 63/84 (75.00%), Postives = 68/84 (80.95%), Query Frame = 0

Query: 6   DLSVNCYDDVV-FEYRRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCK 65
           DL  +   DVV  EYRRGLSRYYSGK+RSFACIAD RCVEDLKKP HP+AKKRKK SDCK
Sbjct: 159 DLGESMSPDVVELEYRRGLSRYYSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCK 218

Query: 66  EIHVPPYHCRRISS-QCSIPFFTA 87
            IHV P+HCRR SS  CSIPFF +
Sbjct: 219 GIHVSPHHCRRASSTHCSIPFFAS 242

BLAST of Csor.00g277570 vs. NCBI nr
Match: KAA0033797.1 (hypothetical protein E6C27_scaffold142G00550 [Cucumis melo var. makuwa] >TYK22337.1 hypothetical protein E5676_scaffold1428G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (293), Expect = 3.23e-32
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0

Query: 20 RRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEI-HVPPYHCRRISS 79
          +RGLSRYYSGK+RSFACIADVR VEDLKKPKHP+AKKRKK SDCKEI +VPP+HCRR SS
Sbjct: 16 KRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEITNVPPFHCRRASS 75

Query: 80 QCSIPF 84
           CS+PF
Sbjct: 76 HCSVPF 81

BLAST of Csor.00g277570 vs. NCBI nr
Match: KAG6588432.1 (hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117 bits (292), Expect = 5.62e-32
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 0

Query: 20 RRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEIHVPPYHCRRISS- 79
          +RGLSRYYSGK+RSFACIAD RCVEDLKKP HP+AKKRKK SDCK IHV P+HCRR SS 
Sbjct: 23 KRGLSRYYSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVSPHHCRRASST 82

Query: 80 QCSIPFFTA 87
           CSIPFF +
Sbjct: 83 HCSIPFFAS 91

BLAST of Csor.00g277570 vs. NCBI nr
Match: KGN43154.1 (hypothetical protein Csa_020555 [Cucumis sativus])

HSP 1 Score: 114 bits (286), Expect = 4.75e-31
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0

Query: 20 RRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEI--HVPPYHCRRIS 79
          +RGLSRYYSGK+RSFACIADVR VEDLKKPKHP+AKKRKK SD KEI  +VPP+HCRR+S
Sbjct: 23 KRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDIKEIIINVPPFHCRRVS 82

Query: 80 SQCSIPF 84
          S CS+PF
Sbjct: 83 SHCSVPF 89

BLAST of Csor.00g277570 vs. ExPASy TrEMBL
Match: A0A5A7SX13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00540 PE=4 SV=1)

HSP 1 Score: 117 bits (293), Expect = 1.57e-32
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0

Query: 20 RRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEI-HVPPYHCRRISS 79
          +RGLSRYYSGK+RSFACIADVR VEDLKKPKHP+AKKRKK SDCKEI +VPP+HCRR SS
Sbjct: 16 KRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEITNVPPFHCRRASS 75

Query: 80 QCSIPF 84
           CS+PF
Sbjct: 76 HCSVPF 81

BLAST of Csor.00g277570 vs. ExPASy TrEMBL
Match: A0A0A0K2B1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004070 PE=4 SV=1)

HSP 1 Score: 114 bits (286), Expect = 2.30e-31
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0

Query: 20 RRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEI--HVPPYHCRRIS 79
          +RGLSRYYSGK+RSFACIADVR VEDLKKPKHP+AKKRKK SD KEI  +VPP+HCRR+S
Sbjct: 23 KRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDIKEIIINVPPFHCRRVS 82

Query: 80 SQCSIPF 84
          S CS+PF
Sbjct: 83 SHCSVPF 89

BLAST of Csor.00g277570 vs. ExPASy TrEMBL
Match: A0A6A6LLK4 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_030195 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.16e-24
Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0

Query: 20 RRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEIHVPPYHCRRISS- 79
          RRGLSRYYSGKSRSF CIADV+C+EDLKK +HP+AKKRKK S+ +E+  PPY CRRISS 
Sbjct: 23 RRGLSRYYSGKSRSFTCIADVQCLEDLKKKEHPDAKKRKKYSEGREMQAPPYPCRRISST 82

Query: 80 -QCS 81
           QC+
Sbjct: 83 TQCA 86

BLAST of Csor.00g277570 vs. ExPASy TrEMBL
Match: A0A2C9V1A5 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G091000 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.11e-24
Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 0

Query: 16 VFEYRRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEIHVPPYHCRR 75
          +   +RGLSRYYSGKSRSFAC+ DV+C+EDLKK +HP+AKKRKK S+ +E H+PPY CR+
Sbjct: 18 ILPNKRGLSRYYSGKSRSFACMEDVQCLEDLKKKEHPDAKKRKKFSERRESHIPPYQCRK 77

Query: 76 ISS 78
          +SS
Sbjct: 78 LSS 80

BLAST of Csor.00g277570 vs. ExPASy TrEMBL
Match: B9HRJ5 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G120300 PE=4 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 6.67e-24
Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 0

Query: 18 EYRRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEIHVPPYHCRRIS 77
          + R GLSRYYSGK+RSF CIADVRC+EDLKKP+ P+ KKR+K SD   +HVPPY CRR+S
Sbjct: 21 QKRGGLSRYYSGKARSFTCIADVRCLEDLKKPERPDPKKRQKYSDRNGLHVPPYPCRRVS 80

Query: 78 S--QCSIP 83
          S  QC  P
Sbjct: 81 SSTQCFSP 88

BLAST of Csor.00g277570 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0

Query: 20  RRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEIHVPPYHCRRIS 78
           RRGLS++Y GKS+SF  +A+   VEDL KP++P   K K++ +         HCRR+S
Sbjct: 56  RRGLSKHYKGKSQSFTTLAEALTVEDLAKPENPFNAKLKQRRESP-------HCRRLS 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6572054.13.51e-59100.00hypothetical protein SDJN03_28782, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7022280.11.24e-3375.00hypothetical protein SDJN02_16011, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAA0033797.13.23e-3283.33hypothetical protein E6C27_scaffold142G00550 [Cucumis melo var. makuwa] >TYK2233... [more]
KAG6588432.15.62e-3279.71hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN43154.14.75e-3180.60hypothetical protein Csa_020555 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5A7SX131.57e-3283.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K2B12.30e-3180.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004070 PE=4 SV=1[more]
A0A6A6LLK41.16e-2473.44Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_030195 PE=4 SV=1[more]
A0A2C9V1A55.11e-2466.67Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G091000 PE=4 SV=... [more]
B9HRJ56.67e-2467.65Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G120300 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT3G03170.11.4e-0644.83unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33172:SF38BNAA01G05330D PROTEINcoord: 19..80
NoneNo IPR availablePANTHERPTHR33172OS08G0516900 PROTEINcoord: 19..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g277570.m01Csor.00g277570.m01mRNA