Csor.00g277570 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCACTACAGTGGATTTATCGGTTAATTGTTATGATGATGTTGTGTTCGAGTATAGGAGAGGTCTATCTCGATACTACTCGGGAAAATCTAGGTCATTTGCTTGCATAGCTGACGTTCGATGCGTAGAAGACTTGAAGAAACCGAAGCATCCAGAAGCTAAGAAAAGGAAGAAACAATCGGACTGCAAAGAAATTCACGTCCCTCCTTATCACTGTCGAAGAATTTCTTCTCAGTGTTCCATTCCGTTCTTTACTGCATGA ATGGGCACTACAGTGGATTTATCGGTTAATTGTTATGATGATGTTGTGTTCGAGTATAGGAGAGGTCTATCTCGATACTACTCGGGAAAATCTAGGTCATTTGCTTGCATAGCTGACGTTCGATGCGTAGAAGACTTGAAGAAACCGAAGCATCCAGAAGCTAAGAAAAGGAAGAAACAATCGGACTGCAAAGAAATTCACGTCCCTCCTTATCACTGTCGAAGAATTTCTTCTCAGTGTTCCATTCCGTTCTTTACTGCATGA ATGGGCACTACAGTGGATTTATCGGTTAATTGTTATGATGATGTTGTGTTCGAGTATAGGAGAGGTCTATCTCGATACTACTCGGGAAAATCTAGGTCATTTGCTTGCATAGCTGACGTTCGATGCGTAGAAGACTTGAAGAAACCGAAGCATCCAGAAGCTAAGAAAAGGAAGAAACAATCGGACTGCAAAGAAATTCACGTCCCTCCTTATCACTGTCGAAGAATTTCTTCTCAGTGTTCCATTCCGTTCTTTACTGCATGA MGTTVDLSVNCYDDVVFEYRRGLSRYYSGKSRSFACIADVRCVEDLKKPKHPEAKKRKKQSDCKEIHVPPYHCRRISSQCSIPFFTA Homology
BLAST of Csor.00g277570 vs. NCBI nr
Match: KAG6572054.1 (hypothetical protein SDJN03_28782, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011720.1 hypothetical protein SDJN02_26626, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185 bits (470), Expect = 3.51e-59 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Csor.00g277570 vs. NCBI nr
Match: KAG7022280.1 (hypothetical protein SDJN02_16011, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 125 bits (315), Expect = 1.24e-33 Identity = 63/84 (75.00%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Csor.00g277570 vs. NCBI nr
Match: KAA0033797.1 (hypothetical protein E6C27_scaffold142G00550 [Cucumis melo var. makuwa] >TYK22337.1 hypothetical protein E5676_scaffold1428G00540 [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (293), Expect = 3.23e-32 Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0
BLAST of Csor.00g277570 vs. NCBI nr
Match: KAG6588432.1 (hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 117 bits (292), Expect = 5.62e-32 Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of Csor.00g277570 vs. NCBI nr
Match: KGN43154.1 (hypothetical protein Csa_020555 [Cucumis sativus]) HSP 1 Score: 114 bits (286), Expect = 4.75e-31 Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Csor.00g277570 vs. ExPASy TrEMBL
Match: A0A5A7SX13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00540 PE=4 SV=1) HSP 1 Score: 117 bits (293), Expect = 1.57e-32 Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0
BLAST of Csor.00g277570 vs. ExPASy TrEMBL
Match: A0A0A0K2B1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004070 PE=4 SV=1) HSP 1 Score: 114 bits (286), Expect = 2.30e-31 Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Csor.00g277570 vs. ExPASy TrEMBL
Match: A0A6A6LLK4 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_030195 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.16e-24 Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of Csor.00g277570 vs. ExPASy TrEMBL
Match: A0A2C9V1A5 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G091000 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 5.11e-24 Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of Csor.00g277570 vs. ExPASy TrEMBL
Match: B9HRJ5 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G120300 PE=4 SV=2) HSP 1 Score: 95.9 bits (237), Expect = 6.67e-24 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 0
BLAST of Csor.00g277570 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06 Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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