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Csor.00g277060 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTACACCCTCCGCTACCCTCTCGCCGCCCATATCCACCGCCGCCCCCATCGCCGCCGGCTCTAGGCGGCAGAGGAACACCAATGTCCATTACATCACTGGCCTCAACTCCTTTAGTGGCTTGAAAGCTCACAACAATATCACCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGCTCTTTGAAATACCCATCAAAGGGTAAAGGCAAAAACGGCGGTGGGGCTCTCTCTTCTACCTGTAATGCCGCCGGTGAGATTTTCAGGATCGCCGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCGGTGGGGTTTGTTCTTCTCAGGATTGAGGCATCTGTGGAGGAGGCTGAGTGA ATGGCGGCTACACCCTCCGCTACCCTCTCGCCGCCCATATCCACCGCCGCCCCCATCGCCGCCGGCTCTAGGCGGCAGAGGAACACCAATGTCCATTACATCACTGGCCTCAACTCCTTTAGTGGCTTGAAAGCTCACAACAATATCACCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGCTCTTTGAAATACCCATCAAAGGGTAAAGGCAAAAACGGCGGTGGGGCTCTCTCTTCTACCTGTAATGCCGCCGGTGAGATTTTCAGGATCGCCGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCGGTGGGGTTTGTTCTTCTCAGGATTGAGGCATCTGTGGAGGAGGCTGAGTGA ATGGCGGCTACACCCTCCGCTACCCTCTCGCCGCCCATATCCACCGCCGCCCCCATCGCCGCCGGCTCTAGGCGGCAGAGGAACACCAATGTCCATTACATCACTGGCCTCAACTCCTTTAGTGGCTTGAAAGCTCACAACAATATCACCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGCTCTTTGAAATACCCATCAAAGGGTAAAGGCAAAAACGGCGGTGGGGCTCTCTCTTCTACCTGTAATGCCGCCGGTGAGATTTTCAGGATCGCCGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCGGTGGGGTTTGTTCTTCTCAGGATTGAGGCATCTGTGGAGGAGGCTGAGTGA MAATPSATLSPPISTAAPIAAGSRRQRNTNVHYITGLNSFSGLKAHNNITSLGLPVCADQSFANIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASVEEAE Homology
BLAST of Csor.00g277060 vs. ExPASy Swiss-Prot
Match: P80883 (Cytochrome b6-f complex subunit 7 (Fragment) OS=Spinacia oleracea OX=3562 GN=petM PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.0e-08 Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 0
BLAST of Csor.00g277060 vs. NCBI nr
Match: KAG6572003.1 (Cytochrome b6-f complex subunit 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011679.1 Cytochrome b6-f complex subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 233 bits (593), Expect = 1.05e-76 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Csor.00g277060 vs. NCBI nr
Match: XP_022952989.1 (uncharacterized protein LOC111455503 [Cucurbita moschata]) HSP 1 Score: 231 bits (588), Expect = 6.09e-76 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Csor.00g277060 vs. NCBI nr
Match: XP_023554105.1 (uncharacterized protein LOC111811473 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 223 bits (569), Expect = 4.81e-73 Identity = 122/126 (96.83%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of Csor.00g277060 vs. NCBI nr
Match: XP_022972366.1 (uncharacterized protein LOC111470941 [Cucurbita maxima]) HSP 1 Score: 222 bits (566), Expect = 1.38e-72 Identity = 122/126 (96.83%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of Csor.00g277060 vs. NCBI nr
Match: XP_038887487.1 (uncharacterized protein LOC120077620 [Benincasa hispida]) HSP 1 Score: 213 bits (541), Expect = 8.66e-69 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Csor.00g277060 vs. ExPASy TrEMBL
Match: A0A6J1GND2 (uncharacterized protein LOC111455503 OS=Cucurbita moschata OX=3662 GN=LOC111455503 PE=3 SV=1) HSP 1 Score: 231 bits (588), Expect = 2.95e-76 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Csor.00g277060 vs. ExPASy TrEMBL
Match: A0A6J1I5T0 (uncharacterized protein LOC111470941 OS=Cucurbita maxima OX=3661 GN=LOC111470941 PE=3 SV=1) HSP 1 Score: 222 bits (566), Expect = 6.68e-73 Identity = 122/126 (96.83%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of Csor.00g277060 vs. ExPASy TrEMBL
Match: A0A1S3C0U4 (uncharacterized protein LOC103495201 OS=Cucumis melo OX=3656 GN=LOC103495201 PE=3 SV=1) HSP 1 Score: 210 bits (535), Expect = 3.45e-68 Identity = 114/124 (91.94%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Csor.00g277060 vs. ExPASy TrEMBL
Match: A0A0A0K4W4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075020 PE=3 SV=1) HSP 1 Score: 204 bits (520), Expect = 7.91e-65 Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Csor.00g277060 vs. ExPASy TrEMBL
Match: A0A6J1C3G5 (uncharacterized protein LOC111008007 OS=Momordica charantia OX=3673 GN=LOC111008007 PE=3 SV=1) HSP 1 Score: 193 bits (490), Expect = 2.75e-61 Identity = 110/127 (86.61%), Postives = 114/127 (89.76%), Query Frame = 0
BLAST of Csor.00g277060 vs. TAIR 10
Match: AT2G26500.2 (cytochrome b6f complex subunit (petM), putative ) HSP 1 Score: 114.4 bits (285), Expect = 6.7e-26 Identity = 73/127 (57.48%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of Csor.00g277060 vs. TAIR 10
Match: AT2G26500.1 (cytochrome b6f complex subunit (petM), putative ) HSP 1 Score: 114.4 bits (285), Expect = 6.7e-26 Identity = 73/127 (57.48%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of Csor.00g277060 vs. TAIR 10
Match: AT2G26500.3 (cytochrome b6f complex subunit (petM), putative ) HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09 Identity = 48/126 (38.10%), Postives = 60/126 (47.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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