Csor.00g275630 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g275630
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionubiquitin-conjugating enzyme E2 4-like
LocationCsor_Chr15: 9871184 .. 9872960 (-)
RNA-Seq ExpressionCsor.00g275630
SyntenyCsor.00g275630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTCCAAGCAAGCGCCGCGAGATGGATTTGATGAAACTGTAAGTTTTTCCACCTTCCATGTCTTCCGATTTGATTGTTCTGTTCTTCTTTTACGCTTCTGGTTTGACTGTGCTGATTTTGAATCAGGATGATGAGCGATTATAAGGTCGAAACGATCAATGATAGTATGCAAGAGTTCTATGTCGACTTCCATGGACCGAAAGACAGTAAATCTTCTATATCCTTCTTTGATTTTTCAATAGGGTTTTGTTAATTTTGTTGATTCTGTCTCTTTATGATTCCCCCCTTTTCCAGATAGCTTAAGAACTTTGTAATCCTGTGATTATTGTTTTGAGGCTTTGTAGTTTTGTTCTTCTAAATCTAGAGTGTTTGGTGTTTAGAATTTGTTCTTAAGTCTTGCTGGCTTTCCCTTCTGAAATTAAGCCCTGTTGATTTAGATAATTCTAGGCGATATGAATTTGGATTGAAGGATTTCTTATGTGATTTCCTTGAAATTGGAAGGTCTTTATGAAGGAGGTGTGTGGAGGATTAAGGTGGAGTTGCCTGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTTGTCAACAAAATTTATCATCCAAATGTTGATGAAATGTGAGTCGACTGACTTCGACGTCGAAACTTATTACATTGATTCTTACTATGGGCAGGCTGTTGATATCGATGTGTATGAATTGCAGGTCGGGCTCGGTTTGTTTGGATGTTATCAACCAGACATGGAGCCCTATGTTTGGTAGGAAGCTTCTTTTTGGGATTATGTATTATGGTGACCAATTGGTTTTTACATTGTGGATATTGTAATGCTGCAATGTAACTGAGGAATTGTGATCTAATTCGGGTTTTTTTTTTTTTTATGCTGTACAGACCTTGTAAATGTTTTTGATGTGTTTCTTCCACAACTTCTCTTGTATCCCAACCCGTCCGACCCATTGAATGGAGAAGCTGCTGCAGTAATGATGCGTGATCGGACTGCATACGAGCAAAGAGTAAAAGGTACTCTTTAGTTCTATCGAAGATTTGGTAGTTTGAACGAATTTTAATCCATTGGCTCGGGTGGTAACACGAAAACTAGATTTAGTAGTTTTGCTATATGATAATGGCTGAGAATTTTCTTATTGTAAACTCGATTTTTGGTTGTTGATGTTGTGCTAATCCACATGATAAACTTACTAGCCCCGAGCTTCGATGATGGTTGCAACAGTCTAAACTCACCATAACAGATATTGTCCTCTTTGGGCTTACCCTTCCGGGCTTCCCCTCAAGGTTTTTAAAATGCGTCCGCTAGGGAGAGATTTCCACACCCTTATAAACAATGTTTCATTCTCCTCTCCAACCGATTCGAGGTCTAGCGTCCTCGCTGACACTCATTCCCTTCTCCATTTTGCCAAACCCTTTTGTGTTCTGATTATGAAATTATTGATATTGATCATATGGTTGTCACTTCGGATACATCATTAATACCCACTTTTTGATCTCTCGTACAGTATAGAAGTCGTATTGATTAGTTTCCTCCCCCGTCCCCCAACCTGACTCAACGTCCGAAACTCTACATGGTTCGAGACCTGTAAAACTCCCCTATCTCGTTCTTCTTTTTTACATTTTGATCGTGCTTGTCCAGAATTCTGTGAGAAATATGCAAAGCCAGAAGACATTGGAGCTGCTCCTGAGGAGAAATCTAGTGATGAGGAGATGAGTGAAGATGATTATTCCTCAAATGACGAGGGCATGGCAGGCCAAGCTGATGATTGA

mRNA sequence

ATGTCTTCTCCAAGCAAGCGCCGCGAGATGGATTTGATGAAACTGATGATGAGCGATTATAAGGTCGAAACGATCAATGATAGTATGCAAGAGTTCTATGTCGACTTCCATGGACCGAAAGACAGTCTTTATGAAGGAGGTGTGTGGAGGATTAAGGTGGAGTTGCCTGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTTGTCAACAAAATTTATCATCCAAATGTTGATGAAATGTCGGGCTCGGTTTGTTTGGATGTTATCAACCAGACATGGAGCCCTATGTTTGACCTTGTAAATGTTTTTGATGTGTTTCTTCCACAACTTCTCTTGTATCCCAACCCGTCCGACCCATTGAATGGAGAAGCTGCTGCAGTAATGATGCGTGATCGGACTGCATACGAGCAAAGAGTAAAAGAATTCTGTGAGAAATATGCAAAGCCAGAAGACATTGGAGCTGCTCCTGAGGAGAAATCTAGTGATGAGGAGATGAGTGAAGATGATTATTCCTCAAATGACGAGGGCATGGCAGGCCAAGCTGATGATTGA

Coding sequence (CDS)

ATGTCTTCTCCAAGCAAGCGCCGCGAGATGGATTTGATGAAACTGATGATGAGCGATTATAAGGTCGAAACGATCAATGATAGTATGCAAGAGTTCTATGTCGACTTCCATGGACCGAAAGACAGTCTTTATGAAGGAGGTGTGTGGAGGATTAAGGTGGAGTTGCCTGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTTGTCAACAAAATTTATCATCCAAATGTTGATGAAATGTCGGGCTCGGTTTGTTTGGATGTTATCAACCAGACATGGAGCCCTATGTTTGACCTTGTAAATGTTTTTGATGTGTTTCTTCCACAACTTCTCTTGTATCCCAACCCGTCCGACCCATTGAATGGAGAAGCTGCTGCAGTAATGATGCGTGATCGGACTGCATACGAGCAAAGAGTAAAAGAATTCTGTGAGAAATATGCAAAGCCAGAAGACATTGGAGCTGCTCCTGAGGAGAAATCTAGTGATGAGGAGATGAGTGAAGATGATTATTCCTCAAATGACGAGGGCATGGCAGGCCAAGCTGATGATTGA

Protein sequence

MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQADD
Homology
[Close]
BLAST of Csor.00g275630 vs. ExPASy Swiss-Prot
Match: P42748 (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2)

HSP 1 Score: 305.4 bits (781), Expect = 4.2e-82
Identity = 146/175 (83.43%), Postives = 164/175 (93.71%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMD+MKLMMSDYKVETIND MQEFYV+F+GPKDSLY+GGVW+I+VELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVF+ FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDE 176
           NGEAAA+MMRDR AYEQRVKE+CEKYAKP   G   E+KSSDEE+SE++Y S++E
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKP---GEGSEDKSSDEELSEEEYGSDNE 172

[Close]
BLAST of Csor.00g275630 vs. ExPASy Swiss-Prot
Match: P42749 (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2)

HSP 1 Score: 299.3 bits (765), Expect = 3.0e-80
Identity = 149/187 (79.68%), Postives = 165/187 (88.24%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEF+V+F GPKDS+YEGGVW+I+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPS+GF+ KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVF+ FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSS-----NDE 180
           NGEAAA+MMRDR  YEQRVKE+CEKYAKP    A  EE SSD+EMSED+Y+S     +D 
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPR---ADTEEMSSDDEMSEDEYASDGDDEDDV 180

Query: 181 GMAGQAD 183
            +AG+ D
Sbjct: 181 AIAGKLD 184

[Close]
BLAST of Csor.00g275630 vs. ExPASy Swiss-Prot
Match: P16577 (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 5.1e-80
Identity = 142/183 (77.60%), Postives = 163/183 (89.07%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKV+ IND M EF+V FHGPKDS+Y+GGVW+++VEL +AYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPSIGF NKIYHPNVDEMSGSVCLDVINQTWSPMFDLVN+F+VFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSE-DDYSSNDEGMAG 180
           NGEAA++MMRD+ AYE +VKE+CE+YAKPEDI    EE+ SDEE+S+ + Y S DE + G
Sbjct: 121 NGEAASLMMRDKNAYENKVKEYCERYAKPEDISPEEEEEESDEELSDAEGYDSGDEAIMG 180

Query: 181 QAD 183
            AD
Sbjct: 181 HAD 183

[Close]
BLAST of Csor.00g275630 vs. ExPASy Swiss-Prot
Match: P42750 (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-74
Identity = 132/182 (72.53%), Postives = 157/182 (86.26%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           M+SPSKRREMD+MKLMMSDYKV+T+ND +Q FYV FHGP DSLY+GGVW+IKVELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMFDL+NVF+ FLPQLLLYPNPSDP 
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAA+++MRDR AYE +VKE+CEKYAKPE+I +  ++  S  E   D    +D+ + G+
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSEDGSDSDDDDDDEIVGK 180

Query: 181 AD 183
           AD
Sbjct: 181 AD 182

[Close]
BLAST of Csor.00g275630 vs. ExPASy Swiss-Prot
Match: Q9P7R4 (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc8 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-60
Identity = 110/182 (60.44%), Postives = 142/182 (78.02%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSP +R E D+MKL+MSDY+V  +ND+MQEFYV FHGP ++ Y GG+W++ VELP  YP
Sbjct: 1   MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           +KSPSIGFVN+I+HPN+DE+SGSVCLDVINQTWSPMFD++N+F+VFLPQLL YPN SDPL
Sbjct: 61  WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAAA+++R+   Y  +V+++  +YA  ED      + S D+ MS  D  S DE +AG 
Sbjct: 121 NGEAAALLLREPNTYYAKVRDYIARYANKEDADITLNDSSDDDTMSSIDTESGDE-IAGP 180

Query: 181 AD 183
            D
Sbjct: 181 MD 181

[Close]
BLAST of Csor.00g275630 vs. NCBI nr
Match: KAG6579517.1 (Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 369 bits (947), Expect = 7.93e-129
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180

Query: 181 ADD 183
           ADD
Sbjct: 181 ADD 183

[Close]
BLAST of Csor.00g275630 vs. NCBI nr
Match: XP_022929074.1 (ubiquitin-conjugating enzyme E2 4-like [Cucurbita moschata] >XP_022970107.1 ubiquitin-conjugating enzyme E2 4-like [Cucurbita maxima] >XP_023549616.1 ubiquitin-conjugating enzyme E2 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368 bits (944), Expect = 2.27e-128
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEE+SEDDYSSNDEGMAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDDYSSNDEGMAGQ 180

Query: 181 ADD 183
           ADD
Sbjct: 181 ADD 183

[Close]
BLAST of Csor.00g275630 vs. NCBI nr
Match: KAG7016977.1 (Ubiquitin-conjugating enzyme E2 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360 bits (925), Expect = 2.65e-125
Identity = 183/194 (94.33%), Postives = 183/194 (94.33%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFDVFLPQ 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVFDVFLPQ
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIMYYDLVNVFDVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDD 180
           LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDD
Sbjct: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDD 180

Query: 181 YSSNDEGMAGQADD 183
           YSSNDEGMAGQADD
Sbjct: 181 YSSNDEGMAGQADD 194

[Close]
BLAST of Csor.00g275630 vs. NCBI nr
Match: XP_004143895.1 (ubiquitin-conjugating enzyme E2 4 [Cucumis sativus] >XP_008437307.1 PREDICTED: ubiquitin-conjugating enzyme E2 4-like [Cucumis melo] >XP_038906796.1 ubiquitin-conjugating enzyme E2 4-like [Benincasa hispida] >KAA0042743.1 ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucumis melo var. makuwa] >KGN50082.1 hypothetical protein Csa_000238 [Cucumis sativus])

HSP 1 Score: 355 bits (911), Expect = 2.45e-123
Identity = 174/182 (95.60%), Postives = 179/182 (98.35%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLY+GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVF+VFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAAAVMMRDRTAYEQRVKE+CEKYAKPEDIGA PEEKSSDEE+SEDDYSS DE MAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYSSGDEAMAGQ 180

Query: 181 AD 182
           AD
Sbjct: 181 AD 182

[Close]
BLAST of Csor.00g275630 vs. NCBI nr
Match: XP_022159827.1 (ubiquitin-conjugating enzyme E2 4-like [Momordica charantia])

HSP 1 Score: 352 bits (902), Expect = 5.77e-122
Identity = 172/182 (94.51%), Postives = 179/182 (98.35%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE INDSMQEFYVDFHGPKDSLY+GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVF+VFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAAAVMMRDRTAYEQRVKE+CEKYAKPEDIGA PEEKSSDEE+SEDDY+S+DE MAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYASSDEDMAGQ 180

Query: 181 AD 182
           AD
Sbjct: 181 AD 182

[Close]
BLAST of Csor.00g275630 vs. ExPASy TrEMBL
Match: A0A6J1HY74 (ubiquitin-conjugating enzyme E2 4-like OS=Cucurbita maxima OX=3661 GN=LOC111469098 PE=3 SV=1)

HSP 1 Score: 368 bits (944), Expect = 1.10e-128
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEE+SEDDYSSNDEGMAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDDYSSNDEGMAGQ 180

Query: 181 ADD 183
           ADD
Sbjct: 181 ADD 183

[Close]
BLAST of Csor.00g275630 vs. ExPASy TrEMBL
Match: A0A6J1EMP7 (ubiquitin-conjugating enzyme E2 4-like OS=Cucurbita moschata OX=3662 GN=LOC111435771 PE=3 SV=1)

HSP 1 Score: 368 bits (944), Expect = 1.10e-128
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEE+SEDDYSSNDEGMAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDDYSSNDEGMAGQ 180

Query: 181 ADD 183
           ADD
Sbjct: 181 ADD 183

[Close]
BLAST of Csor.00g275630 vs. ExPASy TrEMBL
Match: A0A5A7THI1 (Ubiquitin-conjugating enzyme E2 4-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002420 PE=3 SV=1)

HSP 1 Score: 355 bits (911), Expect = 1.19e-123
Identity = 174/182 (95.60%), Postives = 179/182 (98.35%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLY+GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVF+VFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAAAVMMRDRTAYEQRVKE+CEKYAKPEDIGA PEEKSSDEE+SEDDYSS DE MAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYSSGDEAMAGQ 180

Query: 181 AD 182
           AD
Sbjct: 181 AD 182

[Close]
BLAST of Csor.00g275630 vs. ExPASy TrEMBL
Match: A0A0A0KNV9 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152970 PE=3 SV=1)

HSP 1 Score: 355 bits (911), Expect = 1.19e-123
Identity = 174/182 (95.60%), Postives = 179/182 (98.35%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLY+GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVF+VFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAAAVMMRDRTAYEQRVKE+CEKYAKPEDIGA PEEKSSDEE+SEDDYSS DE MAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYSSGDEAMAGQ 180

Query: 181 AD 182
           AD
Sbjct: 181 AD 182

[Close]
BLAST of Csor.00g275630 vs. ExPASy TrEMBL
Match: A0A1S3AUA7 (ubiquitin-conjugating enzyme E2 4-like OS=Cucumis melo OX=3656 GN=LOC103482765 PE=3 SV=1)

HSP 1 Score: 355 bits (911), Expect = 1.19e-123
Identity = 174/182 (95.60%), Postives = 179/182 (98.35%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLY+GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVF+VFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAAAVMMRDRTAYEQRVKE+CEKYAKPEDIGA PEEKSSDEE+SEDDYSS DE MAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYSSGDEAMAGQ 180

Query: 181 AD 182
           AD
Sbjct: 181 AD 182

[Close]
BLAST of Csor.00g275630 vs. TAIR 10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4 )

HSP 1 Score: 305.4 bits (781), Expect = 3.0e-83
Identity = 146/175 (83.43%), Postives = 164/175 (93.71%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMD+MKLMMSDYKVETIND MQEFYV+F+GPKDSLY+GGVW+I+VELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVF+ FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDE 176
           NGEAAA+MMRDR AYEQRVKE+CEKYAKP   G   E+KSSDEE+SE++Y S++E
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKP---GEGSEDKSSDEELSEEEYGSDNE 172

[Close]
BLAST of Csor.00g275630 vs. TAIR 10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5 )

HSP 1 Score: 299.3 bits (765), Expect = 2.1e-81
Identity = 149/187 (79.68%), Postives = 165/187 (88.24%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEF+V+F GPKDS+YEGGVW+I+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPS+GF+ KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVF+ FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSS-----NDE 180
           NGEAAA+MMRDR  YEQRVKE+CEKYAKP    A  EE SSD+EMSED+Y+S     +D 
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPR---ADTEEMSSDDEMSEDEYASDGDDEDDV 180

Query: 181 GMAGQAD 183
            +AG+ D
Sbjct: 181 AIAGKLD 184

[Close]
BLAST of Csor.00g275630 vs. TAIR 10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6 )

HSP 1 Score: 280.4 bits (716), Expect = 1.0e-75
Identity = 132/182 (72.53%), Postives = 157/182 (86.26%), Query Frame = 0 

Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           M+SPSKRREMD+MKLMMSDYKV+T+ND +Q FYV FHGP DSLY+GGVW+IKVELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPL 120
           YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMFDL+NVF+ FLPQLLLYPNPSDP 
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120

Query: 121 NGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEEMSEDDYSSNDEGMAGQ 180
           NGEAA+++MRDR AYE +VKE+CEKYAKPE+I +  ++  S  E   D    +D+ + G+
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSEDGSDSDDDDDDEIVGK 180

Query: 181 AD 183
           AD
Sbjct: 181 AD 182

[Close]
BLAST of Csor.00g275630 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 0 

Query: 11  DLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYPYKSPSIGFVN 70
           DL K   S+     + + M  +     GP +S Y GGV+ + +  P  YP+K P + F  
Sbjct: 12  DLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKT 71

Query: 71  KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPLNGEAAAVMMR 130
           K+YHPN++  +GS+CLD++ + WSP   +  V  + +  LL  PNP DPL  E A +   
Sbjct: 72  KVYHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKT 131

Query: 131 DRTAYEQRVKEFCEKYA 148
           DR+ YE   + + +KYA
Sbjct: 132 DRSKYESTARSWTQKYA 146

[Close]
BLAST of Csor.00g275630 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 0 

Query: 11  DLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYPYKSPSIGFVN 70
           DL K   S+     + + M  +     GP +S Y GGV+ + +  P  YP+K P + F  
Sbjct: 12  DLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKT 71

Query: 71  KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFDVFLPQLLLYPNPSDPLNGEAAAVMMR 130
           K+YHPN++  +GS+CLD++ + WSP   +  V  + +  LL  PNP DPL  E A +   
Sbjct: 72  KVYHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKT 131

Query: 131 DRTAYEQRVKEFCEKYA 148
           DR+ YE   + + +KYA
Sbjct: 132 DRSKYESTARSWTQKYA 146

The following BLAST results are available for this feature:
BLAST of Csor.00g275630 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P427484.2e-8283.43Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 S... [more]
P427493.0e-8079.68Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 S... [more]
P165775.1e-8077.60Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1... [more]
P427501.4e-7472.53Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 S... [more]
Q9P7R41.2e-6060.44Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
BLAST of Csor.00g275630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579517.17.93e-129100.00Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022929074.12.27e-12899.45ubiquitin-conjugating enzyme E2 4-like [Cucurbita moschata] >XP_022970107.1 ubiq... [more]
KAG7016977.12.65e-12594.33Ubiquitin-conjugating enzyme E2 5 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_004143895.12.45e-12395.60ubiquitin-conjugating enzyme E2 4 [Cucumis sativus] >XP_008437307.1 PREDICTED: u... [more]
XP_022159827.15.77e-12294.51ubiquitin-conjugating enzyme E2 4-like [Momordica charantia][more]
BLAST of Csor.00g275630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HY741.10e-12899.45ubiquitin-conjugating enzyme E2 4-like OS=Cucurbita maxima OX=3661 GN=LOC1114690... [more]
A0A6J1EMP71.10e-12899.45ubiquitin-conjugating enzyme E2 4-like OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A5A7THI11.19e-12395.60Ubiquitin-conjugating enzyme E2 4-like isoform X1 OS=Cucumis melo var. makuwa OX... [more]
A0A0A0KNV91.19e-12395.60UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152970 PE... [more]
A0A1S3AUA71.19e-12395.60ubiquitin-conjugating enzyme E2 4-like OS=Cucumis melo OX=3656 GN=LOC103482765 P... [more]
BLAST of Csor.00g275630 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G41340.13.0e-8383.43ubiquitin conjugating enzyme 4 [more]
AT1G63800.12.1e-8179.68ubiquitin-conjugating enzyme 5 [more]
AT2G46030.11.0e-7572.53ubiquitin-conjugating enzyme 6 [more]
AT3G08690.11.1e-2135.77ubiquitin-conjugating enzyme 11 [more]
AT3G08690.21.1e-2135.77ubiquitin-conjugating enzyme 11 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..148
e-value: 7.4E-51
score: 184.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..183
NoneNo IPR availablePANTHERPTHR24068:SF347UBIQUITIN-CONJUGATING ENZYME E2-23 KDA-LIKEcoord: 3..182
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..182
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..159
e-value: 9.0E-50
score: 170.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 4..148
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 10..142
e-value: 7.8E-39
score: 132.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..148
score: 42.846832
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..143
e-value: 3.29461E-51
score: 159.29
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 73..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g275630.m01Csor.00g275630.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity