Csor.00g275450 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g275450
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	LEA_2 domain-containing protein
Location	Csor_Chr15: 10009765 .. 10010403 (+)
RNA-Seq Expression	Csor.00g275450
Synteny	Csor.00g275450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGACGACAGCCAGAGCTTCCCAATAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAACAACACCGACACCTCACAACATTCAAAGCCCTAAAAAAGGAACGCTCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCCCCCTCCCTTAACCTCACCCTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACCACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGACCACTACCGGCGCCGGCAGAACCAAGGCCAAAGGCACCAAAACCATGAATGTCACCGTCCATGCTTCCGCCAAGAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTCAGTAGCTTCGCGAATTTGAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTGGGTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGCGAGTAG

mRNA sequence

ATGGTGGACGACAGCCAGAGCTTCCCAATAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAACAACACCGACACCTCACAACATTCAAAGCCCTAAAAAAGGAACGCTCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCCCCCTCCCTTAACCTCACCCTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACCACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGACCACTACCGGCGCCGGCAGAACCAAGGCCAAAGGCACCAAAACCATGAATGTCACCGTCCATGCTTCCGCCAAGAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTCAGTAGCTTCGCGAATTTGAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTGGGTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGCGAGTAG

Coding sequence (CDS)

ATGGTGGACGACAGCCAGAGCTTCCCAATAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAACAACACCGACACCTCACAACATTCAAAGCCCTAAAAAAGGAACGCTCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCCCCCTCCCTTAACCTCACCCTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACCACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGACCACTACCGGCGCCGGCAGAACCAAGGCCAAAGGCACCAAAACCATGAATGTCACCGTCCATGCTTCCGCCAAGAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTCAGTAGCTTCGCGAATTTGAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTGGGTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGCGAGTAG

Protein sequence

MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGFIYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRLIHIFRRRASSEIGCSMILDLNTHQIQHNWVCE

Homology

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BLAST of Csor.00g275450 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.0e-10
Identity = 66/220 (30.00%), Postives = 111/220 (50.45%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           MVD+ +   +A  + + +SDEEQ      ++   +E   KC +Y  +  V +    LI +
Sbjct: 1   MVDEDR-ITLAPTEIYGRSDEEQSGP-RIWRRKTEEPPGKCLVYSLTIIVIIFALCLILS 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120
            I LR++ P +   S+S      S  NS++P  N TL + +++ NSNFG F F+ +++  
Sbjct: 61  SIFLRISKPEIETRSISTRDLR-SGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRV 120

Query: 121 IYAG-AIVGQTTTGAGRTKA-KGTKTMNVTVHASA------KNISADYNNSRLLNLSSFA 180
           +YA   +VG+T     R +A K  +   V V   +      K++  D      L L S A
Sbjct: 121 VYADHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLG-FLELRSVA 180

Query: 181 NLRGRVRLIHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 213
            +RGR++++   +R   S + C+M L+L    IQ N +CE
Sbjct: 181 EVRGRIKVLG-RKRWKVSVMSCTMRLNLTGRFIQ-NLLCE 214

[Close]

BLAST of Csor.00g275450 vs. NCBI nr
Match: KAG6579535.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 401 bits (1030), Expect = 1.60e-140
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA
Sbjct: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120
           LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120

Query: 121 IYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
           IYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL
Sbjct: 121 IYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180

Query: 181 IHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
           IHIFRRRASSEIGCSMILDLNTHQIQHNWVCE
Sbjct: 181 IHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212

[Close]

BLAST of Csor.00g275450 vs. NCBI nr
Match: XP_022969774.1 (uncharacterized protein LOC111468875 [Cucurbita maxima])

HSP 1 Score: 379 bits (973), Expect = 7.84e-132
Identity = 201/212 (94.81%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M DDSQSFPIAHY+AHHKSDEEQ RHLTTFKAL+KERSNKCFIYVFSAFVFLSVAVLIFA
Sbjct: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120
           LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLT+TAQLAVDNSNFGPFNFD+ASVGF
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120

Query: 121 IYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
           IYAGAIVGQ+TTGAGR KAKGTKTMNVTV ASA NISADYNNSRLLNLSSFANLRGRVRL
Sbjct: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180

Query: 181 IHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
           IHIFRRRASSEI CSMILDLNTHQIQHNWVCE
Sbjct: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWVCE 212

[Close]

BLAST of Csor.00g275450 vs. NCBI nr
Match: XP_038875090.1 (late embryogenesis abundant protein At1g64065 [Benincasa hispida])

HSP 1 Score: 305 bits (781), Expect = 1.30e-102
Identity = 160/212 (75.47%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           MV+DSQSFP+AHYQAHHKSDEEQ   L TFK L+KERSNKCFIYVFS FVFLSVAVLIFA
Sbjct: 1   MVEDSQSFPLAHYQAHHKSDEEQQ--LATFKTLRKERSNKCFIYVFSTFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120
           LIVLRVNSP++  SS+S+ KFS++N NSSSPSLNLT+ A+  VDNSNFGPFNFD+ +VG 
Sbjct: 61  LIVLRVNSPSIQLSSVSIPKFSITNANSSSPSLNLTMIAEFTVDNSNFGPFNFDNGTVGL 120

Query: 121 IYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
           +Y GAIVG+ +TGAGR +AKG+K MNVT+ ASAKNIS+D NN  +LNL+SF  LRGRVRL
Sbjct: 121 MYGGAIVGEKSTGAGRAEAKGSKRMNVTMEASAKNISSDSNNLGILNLNSFVKLRGRVRL 180

Query: 181 IHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
           IHIFRRR SSEI CSM LD+NTHQIQ+NWVCE
Sbjct: 181 IHIFRRRTSSEITCSMNLDMNTHQIQYNWVCE 210

[Close]

BLAST of Csor.00g275450 vs. NCBI nr
Match: XP_008437349.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo])

HSP 1 Score: 273 bits (697), Expect = 7.59e-90
Identity = 149/214 (69.63%), Postives = 175/214 (81.78%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK+DEEQ   L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQ--LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTN-SSSP-SLNLTLTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP+++ S++S+ KFSLSN N SSSP SL+L+ +A   VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GR +AKG+K MNVTV  SAKN+S     + +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGS---NGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
           RLIH+FRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of Csor.00g275450 vs. NCBI nr
Match: KAA0042716.1 (late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 272 bits (696), Expect = 1.08e-89
Identity = 149/214 (69.63%), Postives = 175/214 (81.78%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK+DEEQ   L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQ--LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTN-SSSP-SLNLTLTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP+++ S++S+ KFSLSN N SSSP SL+L+ +A   VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GR +AKG+K MNVTV  SAKN+S     + +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGS---NGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
           RLIH+FRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of Csor.00g275450 vs. ExPASy TrEMBL
Match: A0A6J1I3M2 (uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875 PE=4 SV=1)

HSP 1 Score: 379 bits (973), Expect = 3.80e-132
Identity = 201/212 (94.81%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M DDSQSFPIAHY+AHHKSDEEQ RHLTTFKAL+KERSNKCFIYVFSAFVFLSVAVLIFA
Sbjct: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120
           LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLT+TAQLAVDNSNFGPFNFD+ASVGF
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120

Query: 121 IYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
           IYAGAIVGQ+TTGAGR KAKGTKTMNVTV ASA NISADYNNSRLLNLSSFANLRGRVRL
Sbjct: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180

Query: 181 IHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
           IHIFRRRASSEI CSMILDLNTHQIQHNWVCE
Sbjct: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWVCE 212

[Close]

BLAST of Csor.00g275450 vs. ExPASy TrEMBL
Match: A0A1S3ATY3 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482793 PE=4 SV=1)

HSP 1 Score: 273 bits (697), Expect = 3.67e-90
Identity = 149/214 (69.63%), Postives = 175/214 (81.78%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK+DEEQ   L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQ--LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTN-SSSP-SLNLTLTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP+++ S++S+ KFSLSN N SSSP SL+L+ +A   VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GR +AKG+K MNVTV  SAKN+S     + +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGS---NGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
           RLIH+FRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of Csor.00g275450 vs. ExPASy TrEMBL
Match: A0A5A7TL68 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002140 PE=4 SV=1)

HSP 1 Score: 272 bits (696), Expect = 5.21e-90
Identity = 149/214 (69.63%), Postives = 175/214 (81.78%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK+DEEQ   L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQ--LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTN-SSSP-SLNLTLTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP+++ S++S+ KFSLSN N SSSP SL+L+ +A   VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GR +AKG+K MNVTV  SAKN+S     + +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGS---NGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
           RLIH+FRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of Csor.00g275450 vs. ExPASy TrEMBL
Match: A0A0A0KQT7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 4.26e-89
Identity = 150/214 (70.09%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK +EEQ   L TFK L+KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQQ--LATFKILRKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTLTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP++  SS+S  + SLSN TNSSSP SLNL+  A+  VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GR  AKG+K MNVTV  SAKN+S     + +LN SSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGS---NGILNFSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
           RLIHIFRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of Csor.00g275450 vs. ExPASy TrEMBL
Match: A0A6J1H2C0 (uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC111459739 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 3.01e-72
Identity = 127/212 (59.91%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M + S SFP+ H QAHHK+              K E SNKCFIY+FS+FVFL VA+LIF+
Sbjct: 1   MGEHSHSFPLPHSQAHHKTP-------------KNEPSNKCFIYIFSSFVFLCVALLIFS 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120
           LIVLRVNSP +  SS+SV KFS+SNTNSSS SLNLTL A+ ++DNSNFGPF FD+ +V F
Sbjct: 61  LIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVF 120

Query: 121 IYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
           +Y G IVG+ +TG GR +AKGT  MNV+V AS +N+S+D N S +LN+SSFA   GR+ L
Sbjct: 121 MYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHL 180

Query: 181 IHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
           IH+ R+R  SEI CS+ LDLNTHQIQ  WVC+
Sbjct: 181 IHVLRKRIWSEISCSINLDLNTHQIQPRWVCD 199

[Close]

BLAST of Csor.00g275450 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-11
Identity = 66/220 (30.00%), Postives = 111/220 (50.45%), Query Frame = 0


Query: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           MVD+ +   +A  + + +SDEEQ      ++   +E   KC +Y  +  V +    LI +
Sbjct: 1   MVDEDR-ITLAPTEIYGRSDEEQSGP-RIWRRKTEEPPGKCLVYSLTIIVIIFALCLILS 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120
            I LR++ P +   S+S      S  NS++P  N TL + +++ NSNFG F F+ +++  
Sbjct: 61  SIFLRISKPEIETRSISTRDLR-SGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRV 120

Query: 121 IYAG-AIVGQTTTGAGRTKA-KGTKTMNVTVHASA------KNISADYNNSRLLNLSSFA 180
           +YA   +VG+T     R +A K  +   V V   +      K++  D      L L S A
Sbjct: 121 VYADHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLG-FLELRSVA 180

Query: 181 NLRGRVRLIHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 213
            +RGR++++   +R   S + C+M L+L    IQ N +CE
Sbjct: 181 EVRGRIKVLG-RKRWKVSVMSCTMRLNLTGRFIQ-NLLCE 214

[Close]

BLAST of Csor.00g275450 vs. TAIR 10
Match: AT4G23610.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 53/213 (24.88%), Postives = 100/213 (46.95%), Query Frame = 0


Query: 2   VDDSQSFPIAHYQAHHKSD----EEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVL 61
           +++ Q+ P+A      +SD    E+Q+ H  T     + +   C  ++ S  + ++V  +
Sbjct: 8   INEDQAKPLAPLFLTTRSDQPDEEDQYHHDRTKYVHSQTKLILCCGFIASLTMLIAVTFI 67

Query: 62  IFALIVLRVNSPALHFSSLSV-AKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHA 121
           + +L V  ++SP L   S+S   +F   N    + + N T++ ++++ N N   F   + 
Sbjct: 68  VLSLTVFHLHSPNLTVDSISFNQRFDFVN-GKVNTNQNTTVSVEISLHNPNPALFIVKNV 127

Query: 122 SVGFIYAG-AIVGQTTTGAGRTKAKGTKTMNVTVH-------ASAKNISADYNNSRLLNL 181
           +V F +    +VG++   +    AK T  MN+T         AS   +  D  N R ++L
Sbjct: 128 NVSFYHGELVVVGESIRRSETIPAKRTVKMNLTAEIVKTKLLASLPGLMEDL-NGRGVDL 187

Query: 182 SSFANLRGRVRLIHIFRRRASSEIGCSMILDLN 202
            S   +RGRV+ + IFR+    +  C M +  N
Sbjct: 188 KSSVEVRGRVKKMKIFRKTVHLQTDCFMKMTTN 218

The following BLAST results are available for this feature:

BLAST of Csor.00g275450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DST1	5.0e-10	30.00	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Csor.00g275450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579535.1	1.60e-140	100.00	Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022969774.1	7.84e-132	94.81	uncharacterized protein LOC111468875 [Cucurbita maxima]	[more]
XP_038875090.1	1.30e-102	75.47	late embryogenesis abundant protein At1g64065 [Benincasa hispida]	[more]
XP_008437349.1	7.59e-90	69.63	PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo]	[more]
KAA0042716.1	1.08e-89	69.63	late embryogenesis abundant protein [Cucumis melo var. makuwa]	[more]

BLAST of Csor.00g275450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3M2	3.80e-132	94.81	uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875...	[more]
A0A1S3ATY3	3.67e-90	69.63	late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TL68	5.21e-90	69.63	Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0KQT7	4.26e-89	70.09	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 ...	[more]
A0A6J1H2C0	3.01e-72	59.91	uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC1114597...	[more]

BLAST of Csor.00g275450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64065.1	3.5e-11	30.00	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G23610.1	1.4e-04	24.88	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 101..186 e-value: 3.5E-8 score: 33.9
None	No IPR available	GENE3D	2.60.40.1820		coord: 59..181 e-value: 6.8E-6 score: 27.9
None	No IPR available	PANTHER	PTHR31852:SF192	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 8..212
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 8..212
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 51..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g275450.m01	Csor.00g275450.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane