Csor.00g274820 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g274820
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr15: 10387029 .. 10387641 (+)
RNA-Seq ExpressionCsor.00g274820
SyntenyCsor.00g274820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGTGGAAGCGGAGGAGTTGCCGCCGTCGATCCCGGCGGCGGTCGCTGTGTATCTGACGGTCACCGGAGGAATCGAAACCCACCGCCGTCACCGGAGGGCAAAAGCAAAGATCTACAAACAGGGCACGTAATCTGAAACTCATCAATCCACGTATCCAAACACTCCCGATGGAAGACATGGCAGCAATTAGAGAGCTCTCTCATCGCCTCCGATCTCTCCATTTCGTTCAAACAGATCGTACACATCCGATTCTCTTCTTCTCCGTCGTTTCCCCCAAATTCAATCCCCTGTTTTGCAGCAAAATCCCCAAACTCGACGATTGGGAGGCTGTTCTTGATCCTGGCCTGCAAATCAGCCACCGGAACGGTGACCAGCGAAGGGCAGGGGCCATCGGTGAGGAAGAGGTAACTGGTCGGAGGCTGGAAGGGAGAGTCGGCATGGTGCTCCGGCGAGGGCTTGAGGAGGCCGAAACGGAGAAGGATTCTGGTGAAGAAATGGAGGATTTGAGAGCATCTGTGGCCGTTAATGGCGAAATAGAAGAAGCCCATCAGATTTTCGTGGATCTAACTGAACCAAATTCCAAACGATCCCACTGCGAACCCACGTAA

mRNA sequence

ATGCGAGTGGAAGCGGAGGAGTTGCCGCCGTCGATCCCGGCGGCGGTCGCTGTGTATCTGACGGTCACCGGAGGAATCGAAACCCACCGCCGTCACCGGAGGGCAAAAGCAAAGATCTACAAACAGGGCACCAAAATCCCCAAACTCGACGATTGGGAGGCTGTTCTTGATCCTGGCCTGCAAATCAGCCACCGGAACGGTGACCAGCGAAGGGCAGGGGCCATCGGTGAGGAAGAGGTAACTGGTCGGAGGCTGGAAGGGAGAGTCGGCATGGTGCTCCGGCGAGGGCTTGAGGAGGCCGAAACGGAGAAGGATTCTGGTGAAGAAATGGAGGATTTGAGAGCATCTGTGGCCGTTAATGGCGAAATAGAAGAAGCCCATCAGATTTTCGTGGATCTAACTGAACCAAATTCCAAACGATCCCACTGCGAACCCACGTAA

Coding sequence (CDS)

ATGCGAGTGGAAGCGGAGGAGTTGCCGCCGTCGATCCCGGCGGCGGTCGCTGTGTATCTGACGGTCACCGGAGGAATCGAAACCCACCGCCGTCACCGGAGGGCAAAAGCAAAGATCTACAAACAGGGCACCAAAATCCCCAAACTCGACGATTGGGAGGCTGTTCTTGATCCTGGCCTGCAAATCAGCCACCGGAACGGTGACCAGCGAAGGGCAGGGGCCATCGGTGAGGAAGAGGTAACTGGTCGGAGGCTGGAAGGGAGAGTCGGCATGGTGCTCCGGCGAGGGCTTGAGGAGGCCGAAACGGAGAAGGATTCTGGTGAAGAAATGGAGGATTTGAGAGCATCTGTGGCCGTTAATGGCGAAATAGAAGAAGCCCATCAGATTTTCGTGGATCTAACTGAACCAAATTCCAAACGATCCCACTGCGAACCCACGTAA

Protein sequence

MRVEAEELPPSIPAAVAVYLTVTGGIETHRRHRRAKAKIYKQGTKIPKLDDWEAVLDPGLQISHRNGDQRRAGAIGEEEVTGRRLEGRVGMVLRRGLEEAETEKDSGEEMEDLRASVAVNGEIEEAHQIFVDLTEPNSKRSHCEPT
Homology
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BLAST of Csor.00g274820 vs. NCBI nr
Match: KAG6579597.1 (hypothetical protein SDJN03_24045, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 287 bits (735), Expect = 1.03e-97
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MRVEAEELPPSIPAAVAVYLTVTGGIETHRRHRRAKAKIYKQGTKIPKLDDWEAVLDPGL 60
           MRVEAEELPPSIPAAVAVYLTVTGGIETHRRHRRAKAKIYKQGTKIPKLDDWEAVLDPGL
Sbjct: 1   MRVEAEELPPSIPAAVAVYLTVTGGIETHRRHRRAKAKIYKQGTKIPKLDDWEAVLDPGL 60

Query: 61  QISHRNGDQRRAGAIGEEEVTGRRLEGRVGMVLRRGLEEAETEKDSGEEMEDLRASVAVN 120
           QISHRNGDQRRAGAIGEEEVTGRRLEGRVGMVLRRGLEEAETEKDSGEEMEDLRASVAVN
Sbjct: 61  QISHRNGDQRRAGAIGEEEVTGRRLEGRVGMVLRRGLEEAETEKDSGEEMEDLRASVAVN 120

Query: 121 GEIEEAHQIFVDLTEPNSKRSHCEPT 146
           GEIEEAHQIFVDLTEPNSKRSHCEPT
Sbjct: 121 GEIEEAHQIFVDLTEPNSKRSHCEPT 146

The following BLAST results are available for this feature:
BLAST of Csor.00g274820 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g274820 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579597.11.03e-97100.00hypothetical protein SDJN03_24045, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g274820 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g274820 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g274820.m01Csor.00g274820.m01mRNA