Csor.00g271790 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g271790
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor bHLH149-like
Location	Csor_Chr12: 14144723 .. 14145307 (-)
RNA-Seq Expression	Csor.00g271790
Synteny	Csor.00g271790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACGCTCCGATTTCAGACGCCGCGGAATCGAAGAACTCGAGAAGGTTGTTGCAGCAGCCGAATAAGCGTCGGAAAATTGCTTCCGATGTTTGTGCGGAAGGCAGAGAACGGAAGTGGAGGACAGAGGTCGAGCAACAGATCTACTCTTCAAAGCTCGTGGAAGCGATCCGGCACGTAAGTCGGCGGCGGTCCTCGGCGCAAGCAGGATCTCCAATCAACGGACGATTAGTTCGCGAAACCGCGGATTGCGTTCTTGCAGCCGCAGCCAAGGGGAGGACTCGTTGGAGTCGCGCCATTCTAGCGAGCCGATTCCGCCAGAGGCTCGCGAGGCGTCGGAGGACGAAGAAACTGATCGGCCGTAAACCGTCGCGTATGGCGGAGACGAAGAGCGAGAAAAACAAGAAGTTGCCGTCAGTGCAGAGGAAGGTGAAAATTCTCGGCCGGTTAGTTCCAGGTTGCCGTAAAGTCTCATTCCCGAACCTTCTGGAAGAAACGACCGATTACATCTCTGCTTTAGAGATGCAGGTAAGAGCCATGGCAGCGTTGGTCGAACTCCTCGCCGGAGCTCAAAGTAACTAA

mRNA sequence

ATGGACGACGCTCCGATTTCAGACGCCGCGGAATCGAAGAACTCGAGAAGGTTGTTGCAGCAGCCGAATAAGCGTCGGAAAATTGCTTCCGATGTTTGTGCGGAAGGCAGAGAACGGAAGTGGAGGACAGAGGTCGAGCAACAGATCTACTCTTCAAAGCTCGTGGAAGCGATCCGGCACGTAAGTCGGCGGCGGTCCTCGGCGCAAGCAGGATCTCCAATCAACGGACGATTAGTTCGCGAAACCGCGGATTGCGTTCTTGCAGCCGCAGCCAAGGGGAGGACTCGTTGGAGTCGCGCCATTCTAGCGAGCCGATTCCGCCAGAGGCTCGCGAGGCGTCGGAGGACGAAGAAACTGATCGGCCGTAAACCGTCGCGTATGGCGGAGACGAAGAGCGAGAAAAACAAGAAGTTGCCGTCAGTGCAGAGGAAGGTGAAAATTCTCGGCCGGTTAGTTCCAGGTTGCCGTAAAGTCTCATTCCCGAACCTTCTGGAAGAAACGACCGATTACATCTCTGCTTTAGAGATGCAGGTAAGAGCCATGGCAGCGTTGGTCGAACTCCTCGCCGGAGCTCAAAGTAACTAA

Coding sequence (CDS)

ATGGACGACGCTCCGATTTCAGACGCCGCGGAATCGAAGAACTCGAGAAGGTTGTTGCAGCAGCCGAATAAGCGTCGGAAAATTGCTTCCGATGTTTGTGCGGAAGGCAGAGAACGGAAGTGGAGGACAGAGGTCGAGCAACAGATCTACTCTTCAAAGCTCGTGGAAGCGATCCGGCACGTAAGTCGGCGGCGGTCCTCGGCGCAAGCAGGATCTCCAATCAACGGACGATTAGTTCGCGAAACCGCGGATTGCGTTCTTGCAGCCGCAGCCAAGGGGAGGACTCGTTGGAGTCGCGCCATTCTAGCGAGCCGATTCCGCCAGAGGCTCGCGAGGCGTCGGAGGACGAAGAAACTGATCGGCCGTAAACCGTCGCGTATGGCGGAGACGAAGAGCGAGAAAAACAAGAAGTTGCCGTCAGTGCAGAGGAAGGTGAAAATTCTCGGCCGGTTAGTTCCAGGTTGCCGTAAAGTCTCATTCCCGAACCTTCTGGAAGAAACGACCGATTACATCTCTGCTTTAGAGATGCAGGTAAGAGCCATGGCAGCGTTGGTCGAACTCCTCGCCGGAGCTCAAAGTAACTAA

Protein sequence

MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGAQSN

Homology

[Close]

BLAST of Csor.00g271790 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.0e-35
Identity = 97/192 (50.52%), Postives = 126/192 (65.62%), Query Frame = 0


Query: 6   ISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRR 65
           I +  ES   ++         +I +    E   ++W+T   QQIY+ KLVEA+R V R+R
Sbjct: 9   IENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEALRRV-RQR 68

Query: 66  SSAQAGSPIN------GRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKL 125
           SS  + +  +       R +R+TAD VLAA+A+G TRWSRAILASR R +L + R+ KK 
Sbjct: 69  SSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKS 128

Query: 126 IGRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVR 185
            G   SR   T++ +  KLP+V+RK+KILGRLVPGCRKVS PNLL+E TDYI+ALEMQVR
Sbjct: 129 TGNCKSRKGLTETNR-IKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVR 188

Query: 186 AMAALVELLAGA 192
           AM AL ELL  A
Sbjct: 189 AMEALAELLTAA 198

[Close]

BLAST of Csor.00g271790 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.8e-28
Identity = 86/200 (43.00%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 5   PISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIR--HVS 64
           P + ++ S  SRR  ++ +    +           KWR+E +QQIYS+KLV A+R   +S
Sbjct: 14  PTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRIS 73

Query: 65  RRRSSAQAGS-PINGRLVRETADCVLAAAAKGRTRWSRAILASRF--------RQRLARR 124
           ++ SS+ + S P  GR VRE AD  LA AA+G+T WSRAIL+           RQR++  
Sbjct: 74  QQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNP 133

Query: 125 RRTKKLIG--RKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYI 184
             T    G  R   + A     K K LP+VQRKVK+L RLVPGCRK S P +LEETTDYI
Sbjct: 134 TTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYI 193

Query: 185 SALEMQVRAMAALVELLAGA 192
           +A+EMQ+R M A++  ++ +
Sbjct: 194 AAMEMQIRTMTAILSAVSSS 213

[Close]

BLAST of Csor.00g271790 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.8e-27
Identity = 81/180 (45.00%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 26  RKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSSAQAGSPI---NGRLVRET 85
           R  AS V  E   R WR+E +Q+IYS+KL +A++ V    S++ + SP     G+ VRE 
Sbjct: 34  RSSASSVSGEIHAR-WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREA 93

Query: 86  ADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI-------------GRKPSRMAE 145
           AD  LA +A+GRT WSRAILA+R + +  ++RR +  +              R   R   
Sbjct: 94  ADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVS 153

Query: 146 TKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLA 190
                 K +P V RKV++LGRLVPGC K S P +LEE TDYI ALEMQVRAM +LV+LL+
Sbjct: 154 VLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of Csor.00g271790 vs. ExPASy Swiss-Prot
Match: Q9M9L6 (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.8e-25
Identity = 76/176 (43.18%), Postives = 104/176 (59.09%), Query Frame = 0


Query: 17  RLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSSAQAGSPING 76
           +L++   + R  + +       R+WR    Q++YS KL +A++   R R SA        
Sbjct: 39  KLMEALRRSRVSSEEAPVRHLSRRWRATTAQKVYSLKLYDALQ---RSRRSA-------- 98

Query: 77  RLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRMAETKSEKNK 136
             VR+TAD VLA  A+G TRWSRAIL SRF   L RRR TK       +      S + +
Sbjct: 99  -TVRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRRR 158

Query: 137 KLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGAQ 193
           KL +V  +V++LG LVPGCR+ + P LL+ET DYI+ALEMQVRAM AL ++L+  Q
Sbjct: 159 KLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQ 202

[Close]

BLAST of Csor.00g271790 vs. NCBI nr
Match: KAG6586210.1 (Transcription factor basic helix-loop-helix 149, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355 bits (912), Expect = 3.98e-123
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60
           MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH
Sbjct: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60

Query: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120
           VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI
Sbjct: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120

Query: 121 GRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180
           GRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA
Sbjct: 121 GRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180

Query: 181 MAALVELLAGAQSN 194
           MAALVELLAGAQSN
Sbjct: 181 MAALVELLAGAQSN 194

[Close]

BLAST of Csor.00g271790 vs. NCBI nr
Match: XP_022937811.1 (transcription factor bHLH149-like [Cucurbita moschata])

HSP 1 Score: 354 bits (909), Expect = 1.14e-122
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60
           MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH
Sbjct: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60

Query: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120
           VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI
Sbjct: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120

Query: 121 GRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180
           GRKPSRMAETKSEKNKKLP+VQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA
Sbjct: 121 GRKPSRMAETKSEKNKKLPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180

Query: 181 MAALVELLAGAQSN 194
           MAALVELLAGAQSN
Sbjct: 181 MAALVELLAGAQSN 194

[Close]

BLAST of Csor.00g271790 vs. NCBI nr
Match: KAG7021037.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354 bits (908), Expect = 1.62e-122
Identity = 192/194 (98.97%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60
           MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH
Sbjct: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60

Query: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120
           VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI
Sbjct: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120

Query: 121 GRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180
           GRKPSRMAETKSEKNKKLP+VQRKVKILGRL+PGCRKVSFPNLLEETTDYISALEMQVRA
Sbjct: 121 GRKPSRMAETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRA 180

Query: 181 MAALVELLAGAQSN 194
           MAALVELLAGAQSN
Sbjct: 181 MAALVELLAGAQSN 194

[Close]

BLAST of Csor.00g271790 vs. NCBI nr
Match: XP_023537600.1 (transcription factor bHLH149-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347 bits (889), Expect = 1.27e-119
Identity = 189/194 (97.42%), Postives = 191/194 (98.45%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60
           MDDAPISDA ESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIR 
Sbjct: 1   MDDAPISDAEESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRQ 60

Query: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120
           VSRRRSSAQAGSPINGRLVRETADCVLAA AKGRTRWSRAILASRFRQRLARRRRTKKLI
Sbjct: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAVAKGRTRWSRAILASRFRQRLARRRRTKKLI 120

Query: 121 GRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180
           GRKPSRMAETKSEKNKKLP+VQRKVKILGRLVPGCRK+SFPNLLEETTDYISALEMQVRA
Sbjct: 121 GRKPSRMAETKSEKNKKLPAVQRKVKILGRLVPGCRKLSFPNLLEETTDYISALEMQVRA 180

Query: 181 MAALVELLAGAQSN 194
           MAALVELLAGAQSN
Sbjct: 181 MAALVELLAGAQSN 194

[Close]

BLAST of Csor.00g271790 vs. NCBI nr
Match: XP_022965958.1 (transcription factor bHLH149-like [Cucurbita maxima])

HSP 1 Score: 338 bits (866), Expect = 4.08e-116
Identity = 186/194 (95.88%), Postives = 190/194 (97.94%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60
           MDDAPISDA ESKNSRRLLQ+PNKRRKIA DV A+GRERKWRTEVEQQIYSSKLVEAIR 
Sbjct: 1   MDDAPISDAEESKNSRRLLQKPNKRRKIAFDVGAKGRERKWRTEVEQQIYSSKLVEAIRQ 60

Query: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120
           VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI
Sbjct: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120

Query: 121 GRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180
           GRKPSR+AETKSEKNKKLP+VQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA
Sbjct: 121 GRKPSRIAETKSEKNKKLPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180

Query: 181 MAALVELLAGAQSN 194
           MAALVELLAGAQSN
Sbjct: 181 MAALVELLAGAQSN 194

[Close]

BLAST of Csor.00g271790 vs. ExPASy TrEMBL
Match: A0A6J1FBF1 (transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111444091 PE=4 SV=1)

HSP 1 Score: 354 bits (909), Expect = 5.52e-123
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60
           MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH
Sbjct: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60

Query: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120
           VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI
Sbjct: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120

Query: 121 GRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180
           GRKPSRMAETKSEKNKKLP+VQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA
Sbjct: 121 GRKPSRMAETKSEKNKKLPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180

Query: 181 MAALVELLAGAQSN 194
           MAALVELLAGAQSN
Sbjct: 181 MAALVELLAGAQSN 194

[Close]

BLAST of Csor.00g271790 vs. ExPASy TrEMBL
Match: A0A6J1HQH2 (transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111465681 PE=4 SV=1)

HSP 1 Score: 338 bits (866), Expect = 1.98e-116
Identity = 186/194 (95.88%), Postives = 190/194 (97.94%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60
           MDDAPISDA ESKNSRRLLQ+PNKRRKIA DV A+GRERKWRTEVEQQIYSSKLVEAIR 
Sbjct: 1   MDDAPISDAEESKNSRRLLQKPNKRRKIAFDVGAKGRERKWRTEVEQQIYSSKLVEAIRQ 60

Query: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120
           VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI
Sbjct: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120

Query: 121 GRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180
           GRKPSR+AETKSEKNKKLP+VQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA
Sbjct: 121 GRKPSRIAETKSEKNKKLPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180

Query: 181 MAALVELLAGAQSN 194
           MAALVELLAGAQSN
Sbjct: 181 MAALVELLAGAQSN 194

[Close]

BLAST of Csor.00g271790 vs. ExPASy TrEMBL
Match: A0A6J1KCR3 (transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111493732 PE=4 SV=1)

HSP 1 Score: 277 bits (709), Expect = 1.58e-92
Identity = 154/187 (82.35%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67
           DA ESKNSRR LQ+PNKR +IAS+V AEGRER+WRTEVEQQIYSS+L EA++ VSR+RSS
Sbjct: 2   DAEESKNSRRSLQKPNKRLQIASNVSAEGRERRWRTEVEQQIYSSRLAEALQRVSRQRSS 61

Query: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRM 127
             A S INGRLVRETADCVLAAAAKGRTRWSRAILA+RFRQRLARRRRTKK IGRKPSR+
Sbjct: 62  PHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPSRV 121

Query: 128 AETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 187
            E K   N+KLP+VQRKVKILGRLVPGCRK+SFPNLLEE TDYISALEMQV+AMAAL E+
Sbjct: 122 EEVK---NRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEI 181

Query: 188 LAGAQSN 194
           LAGAQSN
Sbjct: 182 LAGAQSN 185

[Close]

BLAST of Csor.00g271790 vs. ExPASy TrEMBL
Match: A0A6J1G430 (transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111450552 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 2.60e-91
Identity = 152/187 (81.28%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67
           DA ESKNS+R LQ+PNKRR+IASDV AEGRER+WRTEVEQQIYSS+L EA++ V R  SS
Sbjct: 2   DAEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPSS 61

Query: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRM 127
             A S INGRLVRETADCVLAAAAKGRTRWSRAILA+RFRQRLARRRRTKK IGRKPSR+
Sbjct: 62  PHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPSRV 121

Query: 128 AETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 187
           AE K   N+KLP+VQRKV+ILGRLVPGCRK+SFPNLLEE TDYISALEMQV+AMAAL E+
Sbjct: 122 AEVK---NRKLPAVQRKVRILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEI 181

Query: 188 LAGAQSN 194
           LAGAQ N
Sbjct: 182 LAGAQRN 185

[Close]

BLAST of Csor.00g271790 vs. ExPASy TrEMBL
Match: A0A0A0LJ14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034620 PE=4 SV=1)

HSP 1 Score: 207 bits (527), Expect = 6.35e-65
Identity = 124/189 (65.61%), Postives = 145/189 (76.72%), Query Frame = 0


Query: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67
           DA +S NS+ LLQ  NK   +   +  E  + +W+TE++QQIYSS+L +A+R V+  RSS
Sbjct: 2   DADDSNNSKTLLQHSNKC--LPKILTPEPTQHRWKTEIQQQIYSSRLTQALRRVTHPRSS 61

Query: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRT--KKLIGRKPS 127
               SP+NG LVR TAD VLAA AKGRTRWSRAILA+RFRQ LARRRR   KKL+ RKP 
Sbjct: 62  ----SPLNGNLVRRTADSVLAATAKGRTRWSRAILATRFRQSLARRRRRTKKKLLARKP- 121

Query: 128 RMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALV 187
              E K+EK +KLP+VQRKVKILGRLVPGCRK+SFPNLLEE TDYISALEMQV+AM AL 
Sbjct: 122 ---ELKTEKVRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALA 180

Query: 188 ELLAGAQSN 194
           ELLAG Q N
Sbjct: 182 ELLAGNQRN 180

[Close]

BLAST of Csor.00g271790 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 4.9e-36
Identity = 97/192 (50.52%), Postives = 126/192 (65.62%), Query Frame = 0


Query: 6   ISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRR 65
           I +  ES   ++         +I +    E   ++W+T   QQIY+ KLVEA+R V R+R
Sbjct: 9   IENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEALRRV-RQR 68

Query: 66  SSAQAGSPIN------GRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKL 125
           SS  + +  +       R +R+TAD VLAA+A+G TRWSRAILASR R +L + R+ KK 
Sbjct: 69  SSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKS 128

Query: 126 IGRKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVR 185
            G   SR   T++ +  KLP+V+RK+KILGRLVPGCRKVS PNLL+E TDYI+ALEMQVR
Sbjct: 129 TGNCKSRKGLTETNR-IKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVR 188

Query: 186 AMAALVELLAGA 192
           AM AL ELL  A
Sbjct: 189 AMEALAELLTAA 198

[Close]

BLAST of Csor.00g271790 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 125.9 bits (315), Expect = 3.4e-29
Identity = 86/200 (43.00%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 5   PISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIR--HVS 64
           P + ++ S  SRR  ++ +    +           KWR+E +QQIYS+KLV A+R   +S
Sbjct: 14  PTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRIS 73

Query: 65  RRRSSAQAGS-PINGRLVRETADCVLAAAAKGRTRWSRAILASRF--------RQRLARR 124
           ++ SS+ + S P  GR VRE AD  LA AA+G+T WSRAIL+           RQR++  
Sbjct: 74  QQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNP 133

Query: 125 RRTKKLIG--RKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYI 184
             T    G  R   + A     K K LP+VQRKVK+L RLVPGCRK S P +LEETTDYI
Sbjct: 134 TTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYI 193

Query: 185 SALEMQVRAMAALVELLAGA 192
           +A+EMQ+R M A++  ++ +
Sbjct: 194 AAMEMQIRTMTAILSAVSSS 213

[Close]

BLAST of Csor.00g271790 vs. TAIR 10
Match: AT3G17100.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 125.9 bits (315), Expect = 3.4e-29
Identity = 86/200 (43.00%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 5   PISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIR--HVS 64
           P + ++ S  SRR  ++ +    +           KWR+E +QQIYS+KLV A+R   +S
Sbjct: 14  PTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRIS 73

Query: 65  RRRSSAQAGS-PINGRLVRETADCVLAAAAKGRTRWSRAILASRF--------RQRLARR 124
           ++ SS+ + S P  GR VRE AD  LA AA+G+T WSRAIL+           RQR++  
Sbjct: 74  QQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNP 133

Query: 125 RRTKKLIG--RKPSRMAETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYI 184
             T    G  R   + A     K K LP+VQRKVK+L RLVPGCRK S P +LEETTDYI
Sbjct: 134 TTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYI 193

Query: 185 SALEMQVRAMAALVELLAGA 192
           +A+EMQ+R M A++  ++ +
Sbjct: 194 AAMEMQIRTMTAILSAVSSS 213

[Close]

BLAST of Csor.00g271790 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-28
Identity = 81/180 (45.00%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 26  RKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSSAQAGSPI---NGRLVRET 85
           R  AS V  E   R WR+E +Q+IYS+KL +A++ V    S++ + SP     G+ VRE 
Sbjct: 34  RSSASSVSGEIHAR-WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREA 93

Query: 86  ADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI-------------GRKPSRMAE 145
           AD  LA +A+GRT WSRAILA+R + +  ++RR +  +              R   R   
Sbjct: 94  ADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVS 153

Query: 146 TKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLA 190
                 K +P V RKV++LGRLVPGC K S P +LEE TDYI ALEMQVRAM +LV+LL+
Sbjct: 154 VLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of Csor.00g271790 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-28
Identity = 81/180 (45.00%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 26  RKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSSAQAGSPI---NGRLVRET 85
           R  AS V  E   R WR+E +Q+IYS+KL +A++ V    S++ + SP     G+ VRE 
Sbjct: 34  RSSASSVSGEIHAR-WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREA 93

Query: 86  ADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI-------------GRKPSRMAE 145
           AD  LA +A+GRT WSRAILA+R + +  ++RR +  +              R   R   
Sbjct: 94  ADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVS 153

Query: 146 TKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLA 190
                 K +P V RKV++LGRLVPGC K S P +LEE TDYI ALEMQVRAM +LV+LL+
Sbjct: 154 VLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

The following BLAST results are available for this feature:

BLAST of Csor.00g271790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80482	7.0e-35	50.52	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9LSN7	4.8e-28	43.00	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
Q9C8Z9	1.8e-27	45.00	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
Q9M9L6	3.8e-25	43.18	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]

BLAST of Csor.00g271790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6586210.1	3.98e-123	100.00	Transcription factor basic helix-loop-helix 149, partial [Cucurbita argyrosperma...	[more]
XP_022937811.1	1.14e-122	99.48	transcription factor bHLH149-like [Cucurbita moschata]	[more]
KAG7021037.1	1.62e-122	98.97	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023537600.1	1.27e-119	97.42	transcription factor bHLH149-like [Cucurbita pepo subsp. pepo]	[more]
XP_022965958.1	4.08e-116	95.88	transcription factor bHLH149-like [Cucurbita maxima]	[more]

BLAST of Csor.00g271790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBF1	5.52e-123	99.48	transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111444091 ...	[more]
A0A6J1HQH2	1.98e-116	95.88	transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111465681 PE...	[more]
A0A6J1KCR3	1.58e-92	82.35	transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111493732 PE...	[more]
A0A6J1G430	2.60e-91	81.28	transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111450552 ...	[more]
A0A0A0LJ14	6.35e-65	65.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034620 PE=4 SV=1	[more]

BLAST of Csor.00g271790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09250.1	4.9e-36	50.52	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G17100.1	3.4e-29	43.00	sequence-specific DNA binding transcription factors	[more]
AT3G17100.2	3.4e-29	43.00	sequence-specific DNA binding transcription factors	[more]
AT3G06590.1	1.3e-28	45.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	1.3e-28	45.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR33124:SF69	TRANSCRIPTION FACTOR BHLH149	coord: 16..191
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 16..191
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 131..185 e-value: 2.52536E-16 score: 68.0328
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 126..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g271790.m01	Csor.00g271790.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding