Csor.00g271280 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCGCTGTATCTCTCCACTTCAGCACCAACCGTTCTTCCATTTCGGAAAACCGTTGGCTCTCGAACCATTTCAAAATCCTCGATTCTCTTCCCTTCTTCATCAAAGTCTCGATTCGCAACGATTTGCAGGCAAAGAATTGATGGAGAAGATACGCCTCTCTCCAATGCTATGGATGCTTACAGATTGTTCGGCGTCGACCCGACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCTAAAGTACGTAGGTTTTACTCGTTGCGATGAAAAATCGGATTGTAGTATCTAGATTTGAGTTTTTGGAATATGATTGGGAAGCGATTAAGTGATTGGCTACTTAGGTTGATTGTAGAATTTTTGGTTTTCTGTACCGATTTTCAATTCGGCTTCGGATTTTTGGCCGTGCAGGTGAAGCAATTCCATCCAGACGTGAATAGAGATGGAAATTATTCCGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGGTAGCTATTCATTTATAGTATCAAGAAGAAAGTTGTGTGGTGTTCTTATCTCATTGGTAAACGTTGTTTCTTTAGTAGGATGAACATTATGGCAATCATCATTCATGATGACCTTAATTTGATTGTTATCTCCGCGTCCTTTATTACATTGTAGAATTCAAAACTATTGTTCTGTTGTTTCGAGAGAAAGTGCATAGAGAGTAATCTACGAATGGAAAAGATCACCATTAAAGGTTAACGATGAAATATTCAAGCCATAAGTACTTGTTTCGATGCTGACACCACAAGAGACTGTAACAAGCTGGAACTATTTGTGTTCTGATGAAGAACTTGTTCACTTCTATCATCTATGTTATAGTCAATTATGAAACTCAACAATCACTATGCTTTCTACAATATGCAGATGTTGTCAAGTTGCAGCCGAACCGAGTTCATTGAGAGGTATCGTTGTGCTTTTGGTGTTGTTCTTAATGTGTATAGAGCTGCTTAAAATTCTTGCAGCATTCATCATAGAATAAATTGTGTAATGACCATATTCTTGGAAAGTGCAGGGGAATTCTTATTTATAAATGAAAGGTTATAGATAATATGTAACTGTGAGATCCCACCTCGGTTGGAGAGGTAGAGAGGAGAATGAAGCATACTTTATATAGGTGTGGAAACCTCTCCTTAGCATACATGTTTTAAACACCTTGAGAGGAAGCCCGAATGAGAAAGCTCAAAGAGGACAATATCTGTCAGCGGTGGGCTTGAGCTATTACAAATGGTATCAGAGCTATATACGGGGCAATGTGCCAGTGAGAAGGTTGAGCCTCAAAGAGGGGTGGGCACGAGACGGTATGCCAGCAAGGACGCTAGGCCCTGAAGAGGGTAGATTGGGGGGTCTCACATTGATTGGAGAAGGGAACGAGTGTCGGCCAGGATGCTGGGCCCCTAAGGGGTGGATTGCCCTAAGGGGTAGATTGTGAGATCCCATCGGTTCGGGAGGAGAATGAAGGACCCTTTATAAAGGTGTGGACCCTTTATGAAGGTGTGGAAACCTTTCACTAGCAGATGCGTTTTAAAAACTAGTCTGAAAGGGAAAGCCCAAAGAGGACGAGCTTGGGCTTTTACAACAACAATGAATTACTTTTTACTCAAAATTTACCATATATTAGGGAGATTAAAGGTCCATTAATAAAATTTGATAATGTTCATTTCTATCATTATTCGATGATATATCTATTGTTCATTTTTTATGGAACTCTCACAATCAAACATATGAACTCAGGGAATGTTTAGATCCTTTTGAAAACCCAGAATGTGATGCATTTGATGTCTTTGTTAATGAGTTTCTTTGTGTTGGAAAAGGTACCATCTTTGCTCCAACTTATGAATGTTACAATTTAAGTTCTTTGTTACAATACAACAATCTACCTGTGTTGTGTCATAACAATGTGCAGGTTGCCCATATTCGTGTGTAGACAGAGCTCCCCATGCCTTCACTTTTGCTTCGTCCACCGGGACAGCCCGGGCGACTTCTCAAGGTTCGTTCGAGTGATTATATGCAATTATAATTTCAGTATTTCGAGTGACATATGAAATGTGTATTATTCCTACATCGATTTTATCTTTCGATAAACTAGGACACGGTGAAGATTATCAGGTTCAAATTGCAGTTGGCCAATGCCCCAGAAGCTGTATACATTATGTAACACCTTTGCAAAGAATCATTCTGGAAGAGCTACTTGACAGGTACAAAAATATTCCAACTTAGATTCATGTTCGAAACTGTGGTGTTCTACATTGGTCAGGGAGGAGAACAAACCACCATTTATAAGAGTATGGAAACCTTCCCCTAGAAGACGCGTTTTAAAGCCTTGAGGGAAAGCCCGAGAAGGAAAAGTCCAAAGAGAACAATATCCACTAACTGTGGATCTGGGTCGTTACAGAAACCTTACGACTAGAAATCTCAACCCCTCTAAACTTGAATTTTATACTAAATTTATATTATTTATTAAAGGTTCTTACCTTTACTTTATTAGTTTAATTAGGAAAGTAGCCTAGTTCGGCTGGGCGAAGCTCCGAATGGAAAGAGTACTCTCGTTAAAATAGGTTCTTACCACATAGCTTTTTGGTGACTTAAGTTCATCTTTGTTTGTGTAGTGCCTTGGATGTGCCATATGATAATTCAGCAGAGGCAGATTTACTATATTCTCTTATAGTGAAATCAAAATTCGAGAATAATCGATACAGAAAGCCGAAGAGGGAGCCAAAGACGTCGACCGAACGAGTCGATTGGTATTGA ATGGAGGCGCTGTATCTCTCCACTTCAGCACCAACCGTTCTTCCATTTCGGAAAACCGTTGGCTCTCGAACCATTTCAAAATCCTCGATTCTCTTCCCTTCTTCATCAAAGTCTCGATTCGCAACGATTTGCAGGCAAAGAATTGATGGAGAAGATACGCCTCTCTCCAATGCTATGGATGCTTACAGATTGTTCGGCGTCGACCCGACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCTAAAGTGAAGCAATTCCATCCAGACGTGAATAGAGATGGAAATTATTCCGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGATGTTGTCAAGTTGCAGCCGAACCGAGTTCATTGAGAGGGAATGTTTAGATCCTTTTGAAAACCCAGAATGTGATGCATTTGATGTCTTTGTTAATGAGTTTCTTTGTGTTGGAAAAGGTTGCCCATATTCGTGTGTAGACAGAGCTCCCCATGCCTTCACTTTTGCTTCGTCCACCGGGACAGCCCGGGCGACTTCTCAAGGACACGGTGAAGATTATCAGGTTCAAATTGCAGTTGGCCAATGCCCCAGAAGCTGTATACATTATGTAACACCTTTGCAAAGAATCATTCTGGAAGAGCTACTTGACAGTGCCTTGGATGTGCCATATGATAATTCAGCAGAGGCAGATTTACTATATTCTCTTATAGTGAAATCAAAATTCGAGAATAATCGATACAGAAAGCCGAAGAGGGAGCCAAAGACGTCGACCGAACGAGTCGATTGGTATTGA ATGGAGGCGCTGTATCTCTCCACTTCAGCACCAACCGTTCTTCCATTTCGGAAAACCGTTGGCTCTCGAACCATTTCAAAATCCTCGATTCTCTTCCCTTCTTCATCAAAGTCTCGATTCGCAACGATTTGCAGGCAAAGAATTGATGGAGAAGATACGCCTCTCTCCAATGCTATGGATGCTTACAGATTGTTCGGCGTCGACCCGACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCTAAAGTGAAGCAATTCCATCCAGACGTGAATAGAGATGGAAATTATTCCGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGATGTTGTCAAGTTGCAGCCGAACCGAGTTCATTGAGAGGGAATGTTTAGATCCTTTTGAAAACCCAGAATGTGATGCATTTGATGTCTTTGTTAATGAGTTTCTTTGTGTTGGAAAAGGTTGCCCATATTCGTGTGTAGACAGAGCTCCCCATGCCTTCACTTTTGCTTCGTCCACCGGGACAGCCCGGGCGACTTCTCAAGGACACGGTGAAGATTATCAGGTTCAAATTGCAGTTGGCCAATGCCCCAGAAGCTGTATACATTATGTAACACCTTTGCAAAGAATCATTCTGGAAGAGCTACTTGACAGTGCCTTGGATGTGCCATATGATAATTCAGCAGAGGCAGATTTACTATATTCTCTTATAGTGAAATCAAAATTCGAGAATAATCGATACAGAAAGCCGAAGAGGGAGCCAAAGACGTCGACCGAACGAGTCGATTGGTATTGA MEALYLSTSAPTVLPFRKTVGSRTISKSSILFPSSSKSRFATICRQRIDGEDTPLSNAMDAYRLFGVDPTCSESELKAAFRAKVKQFHPDVNRDGNYSDSMIRRVIQAYEMLSSCSRTEFIERECLDPFENPECDAFDVFVNEFLCVGKGCPYSCVDRAPHAFTFASSTGTARATSQGHGEDYQVQIAVGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKTSTERVDWY Homology
BLAST of Csor.00g271280 vs. ExPASy Swiss-Prot
Match: Q9FMX6 (Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DJC76 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 8.8e-09 Identity = 59/256 (23.05%), Postives = 110/256 (42.97%), Query Frame = 0
BLAST of Csor.00g271280 vs. ExPASy Swiss-Prot
Match: B8I304 (Chaperone protein DnaJ OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=dnaJ PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06 Identity = 23/63 (36.51%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of Csor.00g271280 vs. ExPASy Swiss-Prot
Match: A1B4F0 (Chaperone protein DnaJ OS=Paracoccus denitrificans (strain Pd 1222) OX=318586 GN=dnaJ PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06 Identity = 28/72 (38.89%), Postives = 38/72 (52.78%), Query Frame = 0
BLAST of Csor.00g271280 vs. ExPASy Swiss-Prot
Match: Q8EUM4 (Chaperone protein DnaJ OS=Mycoplasma penetrans (strain HF-2) OX=272633 GN=dnaJ PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.1e-06 Identity = 31/101 (30.69%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of Csor.00g271280 vs. ExPASy Swiss-Prot
Match: A3DF24 (Chaperone protein DnaJ OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=dnaJ PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 7.0e-06 Identity = 21/59 (35.59%), Postives = 37/59 (62.71%), Query Frame = 0
BLAST of Csor.00g271280 vs. NCBI nr
Match: KAG6586261.1 (Chaperone protein dnaJ C76, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 525 bits (1351), Expect = 7.40e-188 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of Csor.00g271280 vs. NCBI nr
Match: XP_023537184.1 (uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo] >XP_023537185.1 uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo] >XP_023537187.1 uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 522 bits (1344), Expect = 8.64e-187 Identity = 258/260 (99.23%), Postives = 259/260 (99.62%), Query Frame = 0
BLAST of Csor.00g271280 vs. NCBI nr
Match: XP_022937591.1 (uncharacterized protein LOC111443953 [Cucurbita moschata] >XP_022937592.1 uncharacterized protein LOC111443953 [Cucurbita moschata] >XP_022937593.1 uncharacterized protein LOC111443953 [Cucurbita moschata]) HSP 1 Score: 522 bits (1344), Expect = 8.64e-187 Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 0
BLAST of Csor.00g271280 vs. NCBI nr
Match: XP_022965891.1 (uncharacterized protein LOC111465640 [Cucurbita maxima]) HSP 1 Score: 512 bits (1318), Expect = 7.96e-183 Identity = 252/260 (96.92%), Postives = 256/260 (98.46%), Query Frame = 0
BLAST of Csor.00g271280 vs. NCBI nr
Match: KAA0047985.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 451 bits (1160), Expect = 1.11e-158 Identity = 231/267 (86.52%), Postives = 239/267 (89.51%), Query Frame = 0
BLAST of Csor.00g271280 vs. ExPASy TrEMBL
Match: A0A6J1FBN2 (uncharacterized protein LOC111443953 OS=Cucurbita moschata OX=3662 GN=LOC111443953 PE=4 SV=1) HSP 1 Score: 522 bits (1344), Expect = 4.18e-187 Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 0
BLAST of Csor.00g271280 vs. ExPASy TrEMBL
Match: A0A6J1HMW8 (uncharacterized protein LOC111465640 OS=Cucurbita maxima OX=3661 GN=LOC111465640 PE=4 SV=1) HSP 1 Score: 512 bits (1318), Expect = 3.85e-183 Identity = 252/260 (96.92%), Postives = 256/260 (98.46%), Query Frame = 0
BLAST of Csor.00g271280 vs. ExPASy TrEMBL
Match: A0A5A7U2T5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00480 PE=4 SV=1) HSP 1 Score: 451 bits (1160), Expect = 5.38e-159 Identity = 231/267 (86.52%), Postives = 239/267 (89.51%), Query Frame = 0
BLAST of Csor.00g271280 vs. ExPASy TrEMBL
Match: A0A0A0LJM6 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022810 PE=4 SV=1) HSP 1 Score: 448 bits (1153), Expect = 6.27e-158 Identity = 230/267 (86.14%), Postives = 239/267 (89.51%), Query Frame = 0
BLAST of Csor.00g271280 vs. ExPASy TrEMBL
Match: A0A1S4E0D4 (pentatricopeptide repeat-containing protein At3g05340 OS=Cucumis melo OX=3656 GN=LOC103494955 PE=3 SV=1) HSP 1 Score: 437 bits (1125), Expect = 5.15e-145 Identity = 216/236 (91.53%), Postives = 223/236 (94.49%), Query Frame = 0
BLAST of Csor.00g271280 vs. TAIR 10
Match: AT3G05345.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 301.6 bits (771), Expect = 6.1e-82 Identity = 148/227 (65.20%), Postives = 182/227 (80.18%), Query Frame = 0
BLAST of Csor.00g271280 vs. TAIR 10
Match: AT2G42750.1 (DNAJ heat shock N-terminal domain-containing protein ) HSP 1 Score: 72.8 bits (177), Expect = 4.6e-13 Identity = 63/203 (31.03%), Postives = 95/203 (46.80%), Query Frame = 0
BLAST of Csor.00g271280 vs. TAIR 10
Match: AT5G23240.1 (DNAJ heat shock N-terminal domain-containing protein ) HSP 1 Score: 62.4 bits (150), Expect = 6.2e-10 Identity = 59/256 (23.05%), Postives = 110/256 (42.97%), Query Frame = 0
BLAST of Csor.00g271280 vs. TAIR 10
Match: AT1G28210.1 (DNAJ heat shock family protein ) HSP 1 Score: 50.4 bits (119), Expect = 2.5e-06 Identity = 22/64 (34.38%), Postives = 35/64 (54.69%), Query Frame = 0
BLAST of Csor.00g271280 vs. TAIR 10
Match: AT1G28210.2 (DNAJ heat shock family protein ) HSP 1 Score: 50.4 bits (119), Expect = 2.5e-06 Identity = 22/64 (34.38%), Postives = 35/64 (54.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|