Csor.00g271090 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g271090
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUPF0603 protein At1g54780, chloroplastic-like
LocationCsor_Chr12: 14642510 .. 14645782 (-)
RNA-Seq ExpressionCsor.00g271090
SyntenyCsor.00g271090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACCATTCTCTCTCCTCACTCTCTCTCTCCTCTCTTCAACCCTAACCCTAACCCTTCCACTTCCAAGAATCTCTTCCCCGTTTCCTCCCAATCCAGATCAAAATTTCAATGTTTCTGTAAACCTATTTCTGTTTCGCCCAAATCTCTCAAATCTTCTCTCCCAGTTCCTTCGATTTGGCTCTCCCATCTCCAACATGGCCTCGCGGCGCTGTCGATTTCTTTGGCGCTCAACTTCTCCCCGTTGTTGGCCGGTGGGATTGCCGTAGCGTCTGAGTTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCTGGAGTTCTCAGTAGGGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTTGAGGAAGAATTTTCATATCGATTTCGTCACTGTTAGAAAGCTCACTGTGAGTTCTCTGCCTTTGAATTCTTGAGAGCGAAACTAAATTTGTGTTGTTCGGAGAATCTATGGGTTGAATGTTTAATGCAGATATATAGTTATAGAATAATTTGAACTTTTGTTTATCATGGGAAGAAAATGGTAATGATCTGGTGTATGTTTATGAGAATTTGATAATCTTTCTGAGACCCATTTTTAGTAAGTGGGCATCATATTGTGATGGGTTGTTTAAAATGATGGCCACAATATTGAGAAATACCTTCTCTTGTCTAAAGTCTAGGCTACTCAGATATTGTCCTTTTGGATTTTTTCTTTCGGATTTTTCTAAGGAGAGGTTCCCATATCTTTATAAAGAATGTTTTGTATACTCCTCAACCAATGTGAGGTCTCACAATCCACCCCCTTTGGAGCCCAGCGTCCTCGTTCCCCTCTCCATAGATGTGGGACCCCCTAATCGACCCCCCTTCGGGACCCAGCGTCCTCGTTCCTCTCTCCAATTGATGTGGGACCCCCTAATCGACCCCCCTTCGGGGCCCAGCGTCCTCGTTCCCCTCTCCAATTGATGTAGGATCCCCTAATCGACCCCCCTTCGGGGCCCAACGTCCTCGTTCCCCTCTCCAATTGATGTGGGACCCCCTAATCGACCCCCCTTCGGGGCTCAACGTCAGTGCTGGCACATCGCCTAGTGTCCAACCTCCTTTGGGGTTCAATCTTCTTGTTGGCACATCGTCCTCTGATACCATTTGTAACAGCCCAAGCCCAAGCCCAAGCCCATTGCTAGCAGATATTGTCCTCTTTGGACAGCCTCTTTTCGAGCGCTTCCCTCAAGGTTTTTAAAACGGATCTCCTAAGGGAAGGTTTCTACACCTTCATAAAGAATACTTTGTTCTTCTCCCTAACTGATGTGAGATCTCATAATCCACCCCCTTCGGGTCCACCATCCTTGCTAGCACTCGTTCACCTCTCCAATCGACGTGGGATCCCCAATCCACCCCCCTTTGGGGCCCAGCGTCCTCGTAGGCACACCACCTGATGTCCACCCCCCTTTCAGGGTTCAGCCTCCTCGCTGGCACATTGCCTGGTGTCTAGCTCTAATACCATTTGTAACAGTCCAAGTCCACCGCTAGCAGATATTGTCCTTTTTTGGTTTTCCCATTCGGGCTTCCCTTCAAGGTTTTTAAAACTAGTCTTCTAGGTAAAGGTTTCCACACCCTTATAAAAAATGATTTGTTCTACTCCCCAACCAATGTGGGATCTCACAATGGTCTTCCTCAAAGAGTAGTAAGGTGGGCCATGAGCACAAGAAACATAGGTTAAATTATAAGTTTACGCTTTGATCACTTAAGTTTGTGTCTAAAGGGTCTCGAAACGTTATGAACTGCTGATTGTAGAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGATGGTATCCCACTGTGGAAGACGGCAACAATAAGGGCATAGTTGTGCTTGTCACCAGTCAAAAGGAAGGAGCCATTACTGGTGGCCCTGCGTTTATCCAAGCTGTTGGAGAAAACATTCTTGATGCCACAGTAACCGAGAATCTCCCAGGTAAACTAAGCTAACTACCACTTATTTCACTCCACTTTCCAAGCTACAATTTCTACCATTTCTACCATTTCTTGATTAAATTGAACACATTACAACTAGTAGATGCCTTAACTATACTCGTAGTCGTGTCTCCGTGTTTATGCGAGTTGACCTTGCATATGAGTTTCTCGACTTCAAAGGAAAAGAAAACCACAAACAAACTTGTATGTATCTTAGCACGTGTCAATATCCCAACTAGCGTTGTTGTTTCTACTAGGTCTGTGAGCTCTAAAAACGTCGAATATGTTGAGGACTCGTTAAACACAAATGAAAAGTTTCTGGATTTATTAGACATTGTTTGAAGCCTAGAAACCAAATAGACACGAATTTCATAGTTCAGGGACTTGTTAGGCACAAATTTGAGGAACTTCATCTTAATATTGTTCTCGGTTGCTTTTGCTCTAAGCTCTGATACTAAATGTAACCGTCCAAACCCACCGCTAGCAGATATTGCCCTTTTTGGGCTTTCTTTTCCGGGCTTCCCCGCAAGGTTTTAAAACATGTTTGCTAGGAAGAGGTTTCCACACCTTTCCCCTCTCCAATCGATGTGGGATCTCACAATCCACCCCGTTGGTGGTTCAACGTCCTTGCTAGCATATTGCCCGGTGTCTAGCTTTGATACCATTTGTAACAGTCCAAGTCCACCGCTAGCAGTTATTGTCTTCTTTGGGCTTTCACTTCCGGGTCTCTCCTTGAGGTTTTAAAACGTGTTTGCTGGGTCTTGAAGGGGGAGTATGAAACATTCTTTATAGGGGTGTAGAAACCTTTCTCTAGCAGACACGTTTTAAAACTGTGAGACTAACGGTGATACATAACGGGCCAAAGCGGACAATATCTAGTGTGGGCTTGAGACGTTACAATAAAACACTAAAACACCAGGATGAATGCATCAAAGAAGTGAATAATATGCTTGTAGTTGCTACTTCATTTATGAAACTGCAGGGTGAGTAAGGTTTGTTATGTAACTGCAGTATTAGCTACCGATGAAAAATACAATGAAGCCATATATAGCAGTGCGAAACGGCTAGTTGCTGCCATTGATGGCTTGCCAGATCCTGGAGGTCCTTCATTCAAGGAAAATAAGCGAGAATCTAACTTCAAATCAAGGGAAGAAACAGAGGAGAAAAGAGGTCAGTTTTCTCTTGTTGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTGA

mRNA sequence

ATGGAAACCATTCTCTCTCCTCACTCTCTCTCTCCTCTCTTCAACCCTAACCCTAACCCTTCCACTTCCAAGAATCTCTTCCCCGTTTCCTCCCAATCCAGATCAAAATTTCAATGTTTCTGTAAACCTATTTCTGTTTCGCCCAAATCTCTCAAATCTTCTCTCCCAGTTCCTTCGATTTGGCTCTCCCATCTCCAACATGGCCTCGCGGCGCTGTCGATTTCTTTGGCGCTCAACTTCTCCCCGTTGTTGGCCGGTGGGATTGCCGTAGCGTCTGAGTTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCTGGAGTTCTCAGTAGGGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTTGAGGAAGAATTTTCATATCGATTTCGTCACTGTTAGAAAGCTCACTAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGATGGTATCCCACTGTGGAAGACGGCAACAATAAGGGCATAGTTGTGCTTGTCACCAGTCAAAAGGAAGGAGCCATTACTGGTGGCCCTGCGTTTATCCAAGCTGTTGGAGAAAACATTCTTGATGCCACAGTAACCGAGAATCTCCCAGTATTAGCTACCGATGAAAAATACAATGAAGCCATATATAGCAGTGCGAAACGGCTAGTTGCTGCCATTGATGGCTTGCCAGATCCTGGAGGTCCTTCATTCAAGGAAAATAAGCGAGAATCTAACTTCAAATCAAGGGAAGAAACAGAGGAGAAAAGAGGTCAGTTTTCTCTTGTTGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTGA

Coding sequence (CDS)

ATGGAAACCATTCTCTCTCCTCACTCTCTCTCTCCTCTCTTCAACCCTAACCCTAACCCTTCCACTTCCAAGAATCTCTTCCCCGTTTCCTCCCAATCCAGATCAAAATTTCAATGTTTCTGTAAACCTATTTCTGTTTCGCCCAAATCTCTCAAATCTTCTCTCCCAGTTCCTTCGATTTGGCTCTCCCATCTCCAACATGGCCTCGCGGCGCTGTCGATTTCTTTGGCGCTCAACTTCTCCCCGTTGTTGGCCGGTGGGATTGCCGTAGCGTCTGAGTTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCTGGAGTTCTCAGTAGGGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTTGAGGAAGAATTTTCATATCGATTTCGTCACTGTTAGAAAGCTCACTAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGATGGTATCCCACTGTGGAAGACGGCAACAATAAGGGCATAGTTGTGCTTGTCACCAGTCAAAAGGAAGGAGCCATTACTGGTGGCCCTGCGTTTATCCAAGCTGTTGGAGAAAACATTCTTGATGCCACAGTAACCGAGAATCTCCCAGTATTAGCTACCGATGAAAAATACAATGAAGCCATATATAGCAGTGCGAAACGGCTAGTTGCTGCCATTGATGGCTTGCCAGATCCTGGAGGTCCTTCATTCAAGGAAAATAAGCGAGAATCTAACTTCAAATCAAGGGAAGAAACAGAGGAGAAAAGAGGTCAGTTTTCTCTTGTTGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTGA

Protein sequence

METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Homology
[Close]
BLAST of Csor.00g271090 vs. ExPASy Swiss-Prot
Match: Q9ZVL6 (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g54780 PE=1 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.0e-106
Identity = 207/292 (70.89%), Postives = 243/292 (83.22%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           MET+LSP +LSP  NP P  S  +      S S SK   F  P  +S +  K   P    
Sbjct: 1   METLLSPRALSPPLNPKP-LSLHQTKPTSHSLSLSKPTTFSGPKHLSTRFTK---PESRN 60

Query: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120
           WL   + GLAAL++SL L FSP+   G A+ASEF++LNDGPPKE+++VDDAGVLSRVTKS
Sbjct: 61  WLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVLSRVTKS 120

Query: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180
           DLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKGIVVL+TS
Sbjct: 121 DLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLITS 180

Query: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240
           QKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA+YSSAKRLVAAIDG PDPG
Sbjct: 181 QKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAIDGQPDPG 240

Query: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           GP+ K++KRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVS+K
Sbjct: 241 GPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

[Close]
BLAST of Csor.00g271090 vs. ExPASy Swiss-Prot
Match: A2Y4G9 (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19898 PE=3 SV=2)

HSP 1 Score: 377.1 bits (967), Expect = 1.8e-103
Identity = 207/302 (68.54%), Postives = 245/302 (81.13%), Query Frame = 0 

Query: 1   METILSPHS-LSPLFNPNPNPSTSKNLFPVSSQS--RSKFQCFCKPISVSPKSLKS---- 60
           MET+LSP + LSPL      P++       SS S  RS   C  +     P+++ +    
Sbjct: 1   METLLSPSTLLSPLRGSKKKPASPAASASSSSSSPARSVVSCALRRQQPPPQAVAAWRGD 60

Query: 61  ---SLPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDD 120
                 V S W + LQHGLAA ++SLA++ +P  A   AVASEFDVLN GPP+++++VDD
Sbjct: 61  GGRGGGVGS-WATFLQHGLAAAALSLAISMAP--APAPAVASEFDVLNGGPPEDTYVVDD 120

Query: 121 AGVLSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGN 180
           AGVLSRVTKSD+KRL+ DLE RKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTVE+GN
Sbjct: 121 AGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEEGN 180

Query: 181 NKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLV 240
           NKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY++AKRL 
Sbjct: 181 NKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTAKRLA 240

Query: 241 AAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVS 293
           AAIDGLPDPGGP+FK+NKRESNFK++EETEEKRGQF+LVVGGLLVIAFVVPMAQYYAY+S
Sbjct: 241 AAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYIS 299

[Close]
BLAST of Csor.00g271090 vs. ExPASy Swiss-Prot
Match: Q6ATY4 (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0401100 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.8e-103
Identity = 207/302 (68.54%), Postives = 245/302 (81.13%), Query Frame = 0 

Query: 1   METILSPHS-LSPLFNPNPNPSTSKNLFPVSSQS--RSKFQCFCKPISVSPKSLKS---- 60
           MET+LSP + LSPL      P++       SS S  RS   C  +     P+++ +    
Sbjct: 1   METLLSPSTLLSPLRGSKKKPASPAASASSSSSSPARSVVSCALRRQQPPPQAVAAWRGD 60

Query: 61  ---SLPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDD 120
                 V S W + LQHGLAA ++SLA++ +P  A   AVASEFDVLN GPP+++++VDD
Sbjct: 61  GGRGGGVGS-WATFLQHGLAAAALSLAISMAP--APAPAVASEFDVLNGGPPEDTYVVDD 120

Query: 121 AGVLSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGN 180
           AGVLSRVTKSD+KRL+ DLE RKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTVE+GN
Sbjct: 121 AGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEEGN 180

Query: 181 NKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLV 240
           NKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY++AKRL 
Sbjct: 181 NKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTAKRLA 240

Query: 241 AAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVS 293
           AAIDGLPDPGGP+FK+NKRESNFK++EETEEKRGQF+LVVGGLLVIAFVVPMAQYYAY+S
Sbjct: 241 AAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYIS 299

[Close]
BLAST of Csor.00g271090 vs. NCBI nr
Match: KAG6586280.1 (UPF0603 protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 569 bits (1467), Expect = 1.83e-204
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI
Sbjct: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60

Query: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120
           WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS
Sbjct: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120

Query: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180
           DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS
Sbjct: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180

Query: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240
           QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG
Sbjct: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240

Query: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292

[Close]
BLAST of Csor.00g271090 vs. NCBI nr
Match: XP_022937634.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata] >KAG7021125.1 UPF0603 protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 567 bits (1461), Expect = 1.50e-203
Identity = 291/292 (99.66%), Postives = 291/292 (99.66%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           METIL PHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI
Sbjct: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60

Query: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120
           WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS
Sbjct: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120

Query: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180
           DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS
Sbjct: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180

Query: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240
           QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG
Sbjct: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240

Query: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292

[Close]
BLAST of Csor.00g271090 vs. NCBI nr
Match: XP_023521578.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023537526.1 UPF0603 protein At1g54780, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537527.1 UPF0603 protein At1g54780, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565 bits (1457), Expect = 6.11e-203
Identity = 289/292 (98.97%), Postives = 291/292 (99.66%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           METILSPHSLSPLFNPNP PSTSKNLFP+SSQSRSKFQCFCKPIS+SPKSLKSSLPVPSI
Sbjct: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPKSLKSSLPVPSI 60

Query: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120
           WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS
Sbjct: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120

Query: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180
           DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS
Sbjct: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180

Query: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240
           QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG
Sbjct: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240

Query: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292

[Close]
BLAST of Csor.00g271090 vs. NCBI nr
Match: XP_022965867.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 561 bits (1445), Expect = 4.12e-201
Identity = 287/292 (98.29%), Postives = 289/292 (98.97%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           METILSPHSLSPL NPNP PSTSKNLFP+SSQSRSKFQCFCKPIS+SPKSLKSSLPVPSI
Sbjct: 1   METILSPHSLSPLLNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPKSLKSSLPVPSI 60

Query: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120
           W SHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS
Sbjct: 61  WQSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120

Query: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180
           DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS
Sbjct: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180

Query: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240
           QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG
Sbjct: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240

Query: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292

[Close]
BLAST of Csor.00g271090 vs. NCBI nr
Match: XP_022946287.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata] >KAG6599269.1 UPF0603 protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 501 bits (1290), Expect = 1.92e-177
Identity = 266/297 (89.56%), Postives = 271/297 (91.25%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVS-----PKSLKSSL 60
           METILSPH+LSPL   NP PS+ KNLFP S Q R  F  F  PIS S     PKSL+SSL
Sbjct: 1   METILSPHTLSPLL--NPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNPSPKSLRSSL 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
           PVPS W SHLQHGLAAL+ISLALNFSPLLA   A+ASEFDVLNDGPPKESHLVDDAGVLS
Sbjct: 61  PVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV
Sbjct: 121 RVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]
BLAST of Csor.00g271090 vs. ExPASy TrEMBL
Match: A0A6J1FBR7 (UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443983 PE=4 SV=1)

HSP 1 Score: 567 bits (1461), Expect = 7.27e-204
Identity = 291/292 (99.66%), Postives = 291/292 (99.66%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           METIL PHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI
Sbjct: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60

Query: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120
           WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS
Sbjct: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120

Query: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180
           DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS
Sbjct: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180

Query: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240
           QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG
Sbjct: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240

Query: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292

[Close]
BLAST of Csor.00g271090 vs. ExPASy TrEMBL
Match: A0A6J1HLG7 (UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111465622 PE=4 SV=1)

HSP 1 Score: 561 bits (1445), Expect = 2.00e-201
Identity = 287/292 (98.29%), Postives = 289/292 (98.97%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           METILSPHSLSPL NPNP PSTSKNLFP+SSQSRSKFQCFCKPIS+SPKSLKSSLPVPSI
Sbjct: 1   METILSPHSLSPLLNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPKSLKSSLPVPSI 60

Query: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120
           W SHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS
Sbjct: 61  WQSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120

Query: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180
           DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS
Sbjct: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180

Query: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240
           QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG
Sbjct: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240

Query: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292

[Close]
BLAST of Csor.00g271090 vs. ExPASy TrEMBL
Match: A0A6J1G3B4 (UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111450415 PE=4 SV=1)

HSP 1 Score: 501 bits (1290), Expect = 9.31e-178
Identity = 266/297 (89.56%), Postives = 271/297 (91.25%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVS-----PKSLKSSL 60
           METILSPH+LSPL   NP PS+ KNLFP S Q R  F  F  PIS S     PKSL+SSL
Sbjct: 1   METILSPHTLSPLL--NPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNPSPKSLRSSL 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
           PVPS W SHLQHGLAAL+ISLALNFSPLLA   A+ASEFDVLNDGPPKESHLVDDAGVLS
Sbjct: 61  PVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV
Sbjct: 121 RVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]
BLAST of Csor.00g271090 vs. ExPASy TrEMBL
Match: A0A5D3D492 (UPF0603 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00650 PE=4 SV=1)

HSP 1 Score: 497 bits (1279), Expect = 4.58e-176
Identity = 262/298 (87.92%), Postives = 273/298 (91.61%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVS------PKSLKSS 60
           METILSPHSLSPL   NP PS+SKNL   S+Q RS      KPIS+S      PKSL+SS
Sbjct: 1   METILSPHSLSPLL--NPKPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSS 60

Query: 61  LPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVL 120
           LPVPS W SHLQHGLAA++ISLALNFSPLLAG  A+ASEFDVLNDGPPKE+H+VDDAGVL
Sbjct: 61  LPVPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180
           SRVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI
Sbjct: 121 SRVTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240
           VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID
Sbjct: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240

Query: 241 GLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           GLPDPGGPSFK+NKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GLPDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]
BLAST of Csor.00g271090 vs. ExPASy TrEMBL
Match: A0A1S3C0U8 (UPF0603 protein At1g54780, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495349 PE=4 SV=1)

HSP 1 Score: 497 bits (1279), Expect = 4.58e-176
Identity = 262/298 (87.92%), Postives = 273/298 (91.61%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVS------PKSLKSS 60
           METILSPHSLSPL   NP PS+SKNL   S+Q RS      KPIS+S      PKSL+SS
Sbjct: 1   METILSPHSLSPLL--NPKPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSS 60

Query: 61  LPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVL 120
           LPVPS W SHLQHGLAA++ISLALNFSPLLAG  A+ASEFDVLNDGPPKE+H+VDDAGVL
Sbjct: 61  LPVPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180
           SRVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI
Sbjct: 121 SRVTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240
           VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID
Sbjct: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240

Query: 241 GLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           GLPDPGGPSFK+NKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GLPDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]
BLAST of Csor.00g271090 vs. TAIR 10
Match: AT1G54780.1 (thylakoid lumen 18.3 kDa protein )

HSP 1 Score: 387.9 bits (995), Expect = 7.3e-108
Identity = 207/292 (70.89%), Postives = 243/292 (83.22%), Query Frame = 0 

Query: 1   METILSPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           MET+LSP +LSP  NP P  S  +      S S SK   F  P  +S +  K   P    
Sbjct: 1   METLLSPRALSPPLNPKP-LSLHQTKPTSHSLSLSKPTTFSGPKHLSTRFTK---PESRN 60

Query: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120
           WL   + GLAAL++SL L FSP+   G A+ASEF++LNDGPPKE+++VDDAGVLSRVTKS
Sbjct: 61  WLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVLSRVTKS 120

Query: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180
           DLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKGIVVL+TS
Sbjct: 121 DLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLITS 180

Query: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240
           QKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA+YSSAKRLVAAIDG PDPG
Sbjct: 181 QKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAIDGQPDPG 240

Query: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           GP+ K++KRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVS+K
Sbjct: 241 GPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

The following BLAST results are available for this feature:
BLAST of Csor.00g271090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZVL61.0e-10670.89UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g... [more]
A2Y4G91.8e-10368.54UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica OX=39946... [more]
Q6ATY41.8e-10368.54UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica OX=3... [more]
BLAST of Csor.00g271090 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6586280.11.83e-204100.00UPF0603 protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022937634.11.50e-20399.66UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata] >KAG7021125.1... [more]
XP_023521578.16.11e-20398.97UPF0603 protein At1g54780, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_0... [more]
XP_022965867.14.12e-20198.29UPF0603 protein At1g54780, chloroplastic-like [Cucurbita maxima][more]
XP_022946287.11.92e-17789.56UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata] >KAG6599269.1... [more]
BLAST of Csor.00g271090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FBR77.27e-20499.66UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1HLG72.00e-20198.29UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1G3B49.31e-17889.56UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A5D3D4924.58e-17687.92UPF0603 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G0065... [more]
A0A1S3C0U84.58e-17687.92UPF0603 protein At1g54780, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495349... [more]
BLAST of Csor.00g271090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G54780.17.3e-10870.89thylakoid lumen 18.3 kDa protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.310.50coord: 90..242
e-value: 7.0E-28
score: 98.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR30373:SF2UPF0603 PROTEIN OS05G0401100, CHLOROPLASTICcoord: 1..292
NoneNo IPR availablePANTHERPTHR30373UNCHARACTERIZEDcoord: 1..292
IPR007621TPM domainPFAMPF04536TPM_phosphatasecoord: 108..231
e-value: 1.2E-17
score: 64.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g271090.m01Csor.00g271090.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0010206 photosystem II repair
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0003729 mRNA binding