Csor.00g270700 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g270700
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Alba domain-containing protein
Location	Csor_Chr12: 14989278 .. 14990560 (+)
RNA-Seq Expression	Csor.00g270700
Synteny	Csor.00g270700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACGACGATTGCGGTATCGGGAGCTACTGAAACACAGAAGAAGAATAGAATTCAGGTTTCGAATACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGGTATTCATAAATCGTTCTCTCGTTCTTTTCAATTTGGTTACGTTGAACGAGGATTTGGAATTTATTCTGATTTTGTTTGGTTCTCGAGAAATGGAATTGAAATGTGTAATGTAAGAACGAACGACGAATCGGTGGGATTCTTTTGATTTGTTTTATGATTCGAACGATTTCGTTCGGATAATCGTTTGATTTTAGTTTCTGGATTGTTTAGTTTTATTGGAAATTTGAATCATCTTGCTCTCAGTTTGCCCTAAGATCCCCTTCGTTATCGAGATTCGAGATTACGATCTTAGCAAGATTTTGAAATTCATTATGTTTTTGTTTGATTCTTGAAAAAATGGAATCGAAATGTATAATCTAAGAACGAACGATGAATCGGTGCATTTCTTTTTATTTGCTTTATGATTCGAACAATTTCATTTAGATAATCGTTTGATTTTAGTTTCTTGGTTTAAAAAATCAAGATTCGAGATTATGATTCTTTACATCAATGTGTTTAATTCTTGATTCAGAGGTACATTCAACAGCACAATGAGGTTGAACTATCTGCATTGGGAATGGGTACGGTTTTAGTTCTTGAAAATCTTTTAATTTTTTAGCTATCGGTACATGAATTTTTTGATTTTTTTTATCTCAAATTCTACAGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAGAACAATGGATTGGCTACCGAGAAGAGTAATTCTGTTATCATATTTGTTCATTCACGTAATTTCTTGGTAAAATGGTTATCACTGATAATTTGTATGATTTTGTTGTGAAACAGAAGTTTTGACTTCTACGGTCGGCATGAAGGATGAGAACAAAGGTCGTTTAGTTCAGAAAGCTAAGGTTCGTTCATTTTTCTTAGTTAATGATAAGTTTTTCGTGTTAATGATAAGCTAAGGTTCGTTCAAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACATTTTGAAACTTTTTAGCTATGAACGATTCTTGTGGGATTGAGTTTTGAAACGTTTCTTGTTTTGGGTCGATTTTGATAGATTGAGATTGTTCTGGGAAAGTCGGAGAAATTTGATTCTTTGATGACGGCGGCCACGGTGACGGCGGAGGCGGCAGCGGGAGGCGGCGAGGAGAAAAAAAAGGCAGGAGAGGAAAGCAAGGAGGGGCAGTAG

mRNA sequence

ATGACAACGACGATTGCGGTATCGGGAGCTACTGAAACACAGAAGAAGAATAGAATTCAGGTTTCGAATACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAGCACAATGAGGTTGAACTATCTGCATTGGGAATGGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAGAACAATGGATTGGCTACCGAGAAGAAAGTTTTGACTTCTACGGTCGGCATGAAGGATGAGAACAAAGGTCGTTTAGTTCAGAAAGCTAAGATTGAGATTGTTCTGGGAAAGTCGGAGAAATTTGATTCTTTGATGACGGCGGCCACGGTGACGGCGGAGGCGGCAGCGGGAGGCGGCGAGGAGAAAAAAAAGGCAGGAGAGGAAAGCAAGGAGGGGCAGTAG

Coding sequence (CDS)

ATGACAACGACGATTGCGGTATCGGGAGCTACTGAAACACAGAAGAAGAATAGAATTCAGGTTTCGAATACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAGCACAATGAGGTTGAACTATCTGCATTGGGAATGGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAGAACAATGGATTGGCTACCGAGAAGAAAGTTTTGACTTCTACGGTCGGCATGAAGGATGAGAACAAAGGTCGTTTAGTTCAGAAAGCTAAGATTGAGATTGTTCTGGGAAAGTCGGAGAAATTTGATTCTTTGATGACGGCGGCCACGGTGACGGCGGAGGCGGCAGCGGGAGGCGGCGAGGAGAAAAAAAAGGCAGGAGAGGAAAGCAAGGAGGGGCAGTAG

Protein sequence

MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAAAGGGEEKKKAGEESKEGQ

Homology

[Close]

BLAST of Csor.00g270700 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.2e-38
Identity = 84/111 (75.68%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 10  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 69
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 70  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 121
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA    E A
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDA 124

[Close]

BLAST of Csor.00g270700 vs. NCBI nr
Match: KAG6586319.1 (hypothetical protein SDJN03_19052, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248 bits (633), Expect = 2.04e-82
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA
Sbjct: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 120

Query: 121 AGGGEEKKKAGEESKEGQ 138
           AGGGEEKKKAGEESKEGQ
Sbjct: 121 AGGGEEKKKAGEESKEGQ 138

[Close]

BLAST of Csor.00g270700 vs. NCBI nr
Match: XP_022965411.1 (uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 244 bits (624), Expect = 1.56e-80
Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 36  MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 95

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATV AEA 
Sbjct: 96  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT 155

Query: 121 AGGGEEKKKAGEESKEGQ 138
           AGGGEEKKKAGEESKEGQ
Sbjct: 156 AGGGEEKKKAGEESKEGQ 173

[Close]

BLAST of Csor.00g270700 vs. NCBI nr
Match: XP_022938043.1 (uncharacterized protein At2g34160-like [Cucurbita moschata])

HSP 1 Score: 240 bits (612), Expect = 3.24e-79
Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVS ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 1   MTTTIAVSRATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATV AEAA
Sbjct: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAA 120

Query: 121 AGGGEEKKKAGEESKEGQ 138
           AGG EEKKKAGEESKEGQ
Sbjct: 121 AGGREEKKKAGEESKEGQ 138

[Close]

BLAST of Csor.00g270700 vs. NCBI nr
Match: XP_023537985.1 (uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240 bits (612), Expect = 1.51e-78
Identity = 136/139 (97.84%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 46  MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 105

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLM-TAATVTAEA 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLM TAATV  EA
Sbjct: 106 AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMMTAATVATEA 165

Query: 121 AAGGGEEKKKAGEESKEGQ 138
           AAGGGEEKKKAGEESKEGQ
Sbjct: 166 AAGGGEEKKKAGEESKEGQ 184

[Close]

BLAST of Csor.00g270700 vs. NCBI nr
Match: KAG7021166.1 (hypothetical protein SDJN02_17854, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229 bits (583), Expect = 7.49e-75
Identity = 131/138 (94.93%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 4   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 63

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK       SEKFDSLMTAATVTAEAA
Sbjct: 64  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK-------SEKFDSLMTAATVTAEAA 123

Query: 121 AGGGEEKKKAGEESKEGQ 138
           AGGGEEKKKAGEESKEGQ
Sbjct: 124 AGGGEEKKKAGEESKEGQ 134

[Close]

BLAST of Csor.00g270700 vs. ExPASy TrEMBL
Match: A0A6J1HLL6 (uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC111465325 PE=4 SV=1)

HSP 1 Score: 244 bits (624), Expect = 7.53e-81
Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 36  MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 95

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATV AEA 
Sbjct: 96  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT 155

Query: 121 AGGGEEKKKAGEESKEGQ 138
           AGGGEEKKKAGEESKEGQ
Sbjct: 156 AGGGEEKKKAGEESKEGQ 173

[Close]

BLAST of Csor.00g270700 vs. ExPASy TrEMBL
Match: A0A6J1FHQ7 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111444252 PE=4 SV=1)

HSP 1 Score: 240 bits (612), Expect = 1.57e-79
Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVS ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 1   MTTTIAVSRATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATV AEAA
Sbjct: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAA 120

Query: 121 AGGGEEKKKAGEESKEGQ 138
           AGG EEKKKAGEESKEGQ
Sbjct: 121 AGGREEKKKAGEESKEGQ 138

[Close]

BLAST of Csor.00g270700 vs. ExPASy TrEMBL
Match: A0A6J1CQ10 (uncharacterized protein At2g34160 OS=Momordica charantia OX=3673 GN=LOC111013094 PE=4 SV=1)

HSP 1 Score: 211 bits (537), Expect = 3.85e-68
Identity = 123/133 (92.48%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 4   TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI 63
           TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI
Sbjct: 3   TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI 62

Query: 64  LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAAAGG 123
           LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAAT  A  AA  
Sbjct: 63  LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAAA- 122

Query: 124 GEEKKKAGEESKE 136
             E+KKA EESKE
Sbjct: 123 --EEKKA-EESKE 131

[Close]

BLAST of Csor.00g270700 vs. ExPASy TrEMBL
Match: A0A5D3D4G4 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001630 PE=4 SV=1)

HSP 1 Score: 208 bits (530), Expect = 5.64e-67
Identity = 124/139 (89.21%), Postives = 126/139 (90.65%), Query Frame = 0


Query: 4   TIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 63
           TIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 3   TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 62

Query: 64  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAE-- 123
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAAT   E  
Sbjct: 63  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPETV 122

Query: 124 -AAAGGGEEKKKAGEESKE 136
            A A  GEE+KKA EE+KE
Sbjct: 123 VAVAAAGEEEKKA-EENKE 140

[Close]

BLAST of Csor.00g270700 vs. ExPASy TrEMBL
Match: A0A1S3C2U1 (uncharacterized protein At2g34160 OS=Cucumis melo OX=3656 GN=LOC103496224 PE=4 SV=1)

HSP 1 Score: 208 bits (530), Expect = 5.64e-67
Identity = 124/139 (89.21%), Postives = 126/139 (90.65%), Query Frame = 0


Query: 4   TIAVSGAT---ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 63
           TIAVSGAT   ETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 3   TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 62

Query: 64  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAE-- 123
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAAT   E  
Sbjct: 63  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPETV 122

Query: 124 -AAAGGGEEKKKAGEESKE 136
            A A  GEE+KKA EE+KE
Sbjct: 123 VAVAAAGEEEKKA-EENKE 140

[Close]

BLAST of Csor.00g270700 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 174.9 bits (442), Expect = 4.6e-44
Identity = 100/133 (75.19%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 4   TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI 63
           T   +   ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EI
Sbjct: 25  TTTTTATVETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEI 84

Query: 64  LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAAT---VTAEAA 123
           LKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIVLGKS+KFDSL+   T      E A
Sbjct: 85  LKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLVPPVTNGKTPEEEA 144

Query: 124 AGGGEEKKKAGEE 134
           +   E   +A EE
Sbjct: 145 SAETEASVEAQEE 157

[Close]

BLAST of Csor.00g270700 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 161.4 bits (407), Expect = 5.2e-40
Identity = 85/111 (76.58%), Postives = 96/111 (86.49%), Query Frame = 0


Query: 10  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 69
           A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG 
Sbjct: 14  AVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGF 73

Query: 70  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 121
           A EKK++TSTV +KD+++GR VQKAKIEI L KSEKFD LM AA    EAA
Sbjct: 74  AVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEEKEAA 124

[Close]

BLAST of Csor.00g270700 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 157.9 bits (398), Expect = 5.8e-39
Identity = 84/111 (75.68%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 10  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 69
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 70  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 121
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA    E A
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDA 124

The following BLAST results are available for this feature:

BLAST of Csor.00g270700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	8.2e-38	75.68	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of Csor.00g270700 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6586319.1	2.04e-82	100.00	hypothetical protein SDJN03_19052, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022965411.1	1.56e-80	98.55	uncharacterized protein At2g34160-like [Cucurbita maxima]	[more]
XP_022938043.1	3.24e-79	97.83	uncharacterized protein At2g34160-like [Cucurbita moschata]	[more]
XP_023537985.1	1.51e-78	97.84	uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo]	[more]
KAG7021166.1	7.49e-75	94.93	hypothetical protein SDJN02_17854, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Csor.00g270700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLL6	7.53e-81	98.55	uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC1114653...	[more]
A0A6J1FHQ7	1.57e-79	97.83	uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1CQ10	3.85e-68	92.48	uncharacterized protein At2g34160 OS=Momordica charantia OX=3673 GN=LOC111013094...	[more]
A0A5D3D4G4	5.64e-67	89.21	Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C2U1	5.64e-67	89.21	uncharacterized protein At2g34160 OS=Cucumis melo OX=3656 GN=LOC103496224 PE=4 S...	[more]

BLAST of Csor.00g270700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04620.1	4.6e-44	75.19	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	5.2e-40	76.58	Alba DNA/RNA-binding protein	[more]
AT2G34160.1	5.8e-39	75.68	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 17..79 e-value: 2.7E-13 score: 49.5
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 15..125 e-value: 1.6E-53 score: 181.5
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 16..111
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PIRSF	PIRSF030333	UCP030333_Alba	coord: 1..136 e-value: 4.6E-62 score: 206.3
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 7..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..138
None	No IPR available	PANTHER	PTHR31947:SF19	ALBA DNA/RNA-BINDING PROTEIN	coord: 7..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g270700.m01	Csor.00g270700.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048235	pollen sperm cell differentiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding