Csor.00g270320 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g270320
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr12: 15270127 .. 15270735 (-)
RNA-Seq Expression	Csor.00g270320
Synteny	Csor.00g270320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTACCGTGATCCTTCAGCCGCAGGATTGCCTTGGGAACGGGTTACGCCACCAAGGTTTGGTTCTGTCGTCTCCGCCTTTGAAATCGCGGCGGAATTCTAACCGTATTAGTTCTAGTTCTTCTTCTGCAAACCCTAATTTTAATCAGGATGATGCGACTTGTTCCGGTAGGCGGCGGAGTTCGGAGGTGGGAGTTAAGGCTAACCGTCGAGTGAATAGAGGTCGGAGTCGGGTGGTAGAGACGTCCACGGCGGCGAAGATTTCACCGAAGAATCTGGTTATGGGACAAGTCAAGATCTTGAAGCGTGGAGAGATGTTGTGTCCCGATGGAGGTGTTGGTGATGGTGGTAAGAGGATGTTGGAATCGAAGGTTGAGGATTTGGATTTGGTTTTGGGATCGACTGATCGGTTGGGTCCAGACCCTGATTTGATGCAGAAGCAGGTTGTATTTTCGGAATTGAAGGTTGCCGATGGGATCTATGCTGGATCGGGTGCGTTCTTTGCTTCGCCGCCTCCGAGTTCAGTGCCCTTGCCGTCCTTTTTAGGTAAGAACGGTACTGCAACTAACGATCTGCGGCGGTTGTTGCGACTTGATTTGGACTGA

mRNA sequence

ATGGCTACTACCGTGATCCTTCAGCCGCAGGATTGCCTTGGGAACGGGTTACGCCACCAAGGTTTGGTTCTGTCGTCTCCGCCTTTGAAATCGCGGCGGAATTCTAACCGTATTAGTTCTAGTTCTTCTTCTGCAAACCCTAATTTTAATCAGGATGATGCGACTTGTTCCGGTAGGCGGCGGAGTTCGGAGGTGGGAGTTAAGGCTAACCGTCGAGTGAATAGAGGTCGGAGTCGGGTGGTAGAGACGTCCACGGCGGCGAAGATTTCACCGAAGAATCTGGTTATGGGACAAGTCAAGATCTTGAAGCGTGGAGAGATGTTGTGTCCCGATGGAGGTGTTGGTGATGGTGGTAAGAGGATGTTGGAATCGAAGGTTGAGGATTTGGATTTGGTTTTGGGATCGACTGATCGGTTGGGTCCAGACCCTGATTTGATGCAGAAGCAGGTTGTATTTTCGGAATTGAAGGTTGCCGATGGGATCTATGCTGGATCGGGTGCGTTCTTTGCTTCGCCGCCTCCGAGTTCAGTGCCCTTGCCGTCCTTTTTAGGTAAGAACGGTACTGCAACTAACGATCTGCGGCGGTTGTTGCGACTTGATTTGGACTGA

Coding sequence (CDS)

ATGGCTACTACCGTGATCCTTCAGCCGCAGGATTGCCTTGGGAACGGGTTACGCCACCAAGGTTTGGTTCTGTCGTCTCCGCCTTTGAAATCGCGGCGGAATTCTAACCGTATTAGTTCTAGTTCTTCTTCTGCAAACCCTAATTTTAATCAGGATGATGCGACTTGTTCCGGTAGGCGGCGGAGTTCGGAGGTGGGAGTTAAGGCTAACCGTCGAGTGAATAGAGGTCGGAGTCGGGTGGTAGAGACGTCCACGGCGGCGAAGATTTCACCGAAGAATCTGGTTATGGGACAAGTCAAGATCTTGAAGCGTGGAGAGATGTTGTGTCCCGATGGAGGTGTTGGTGATGGTGGTAAGAGGATGTTGGAATCGAAGGTTGAGGATTTGGATTTGGTTTTGGGATCGACTGATCGGTTGGGTCCAGACCCTGATTTGATGCAGAAGCAGGTTGTATTTTCGGAATTGAAGGTTGCCGATGGGATCTATGCTGGATCGGGTGCGTTCTTTGCTTCGCCGCCTCCGAGTTCAGTGCCCTTGCCGTCCTTTTTAGGTAAGAACGGTACTGCAACTAACGATCTGCGGCGGTTGTTGCGACTTGATTTGGACTGA

Protein sequence

MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRRSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLPSFLGKNGTATNDLRRLLRLDLD

Homology

[Close]

BLAST of Csor.00g270320 vs. NCBI nr
Match: XP_022937911.1 (uncharacterized protein LOC111444161 [Cucurbita moschata] >KAG6586356.1 hypothetical protein SDJN03_19089, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021203.1 hypothetical protein SDJN02_17891, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389 bits (998), Expect = 5.65e-136
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR 60
           MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR
Sbjct: 1   MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR 60

Query: 61  RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR 120
           RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR
Sbjct: 61  RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR 120

Query: 121 MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 180
           MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP
Sbjct: 121 MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 180

Query: 181 SFLGKNGTATNDLRRLLRLDLD 202
           SFLGKNGTATNDLRRLLRLDLD
Sbjct: 181 SFLGKNGTATNDLRRLLRLDLD 202

[Close]

BLAST of Csor.00g270320 vs. NCBI nr
Match: XP_022965945.1 (uncharacterized protein LOC111465671 [Cucurbita maxima])

HSP 1 Score: 388 bits (997), Expect = 8.03e-136
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR 60
           MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR
Sbjct: 1   MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR 60

Query: 61  RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR 120
           RSSEVGVKANRRVNRGRSRV+ETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR
Sbjct: 61  RSSEVGVKANRRVNRGRSRVIETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR 120

Query: 121 MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 180
           MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP
Sbjct: 121 MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 180

Query: 181 SFLGKNGTATNDLRRLLRLDLD 202
           SFLGKNGTATNDLRRLLRLDLD
Sbjct: 181 SFLGKNGTATNDLRRLLRLDLD 202

[Close]

BLAST of Csor.00g270320 vs. NCBI nr
Match: XP_023537567.1 (uncharacterized protein LOC111798562 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382 bits (980), Expect = 3.14e-133
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR 60
           MATTVILQPQDCLGNGLR QGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR
Sbjct: 1   MATTVILQPQDCLGNGLRRQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR 60

Query: 61  RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR 120
           RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEML PDGGVGDGGKR
Sbjct: 61  RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLSPDGGVGDGGKR 120

Query: 121 MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 180
           MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP
Sbjct: 121 MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 180

Query: 181 SFLGKNGTATNDLRRLLRLDLD 202
           SFLGKNGTATNDLRRLLRLDLD
Sbjct: 181 SFLGKNGTATNDLRRLLRLDLD 202

[Close]

BLAST of Csor.00g270320 vs. NCBI nr
Match: XP_038890387.1 (uncharacterized protein LOC120079968 [Benincasa hispida])

HSP 1 Score: 301 bits (772), Expect = 1.67e-101
Identity = 167/203 (82.27%), Postives = 175/203 (86.21%), Query Frame = 0


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRR-S 63
           TVIL PQDCLG G RHQGLVLS PPLKSRRNSN  SS+SSS NPNFN DD TCSGRRR S
Sbjct: 3   TVILPPQDCLGKGFRHQGLVLS-PPLKSRRNSNP-SSTSSSTNPNFNHDDTTCSGRRRRS 62

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDG----G 123
           + VGVKANR+VNRGRSR  E ST AKIS KNL+MGQVKILKRGE L PD GVGDG    G
Sbjct: 63  AAVGVKANRQVNRGRSRAEEPSTLAKISSKNLIMGQVKILKRGETLTPDQGVGDGNDSCG 122

Query: 124 KRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVP 183
           KR LESK +D+DLVLGSTDRLGPDPDLMQKQVV +E KV DGIYAGSGAFFASPPPSSVP
Sbjct: 123 KRRLESKGDDVDLVLGSTDRLGPDPDLMQKQVVLTEFKVVDGIYAGSGAFFASPPPSSVP 182

Query: 184 LPSFLGKNGTATNDLRRLLRLDL 201
           LPSFLGKNGTAT+DLRRLLRLDL
Sbjct: 183 LPSFLGKNGTATSDLRRLLRLDL 203

[Close]

BLAST of Csor.00g270320 vs. NCBI nr
Match: XP_022143251.1 (uncharacterized protein LOC111013161 [Momordica charantia])

HSP 1 Score: 276 bits (706), Expect = 1.79e-91
Identity = 160/205 (78.05%), Postives = 169/205 (82.44%), Query Frame = 0


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRRSS 63
           TVIL PQDCLGNGLR QGLVLS+P LKSRRNS    + SSS NPNFN D  +   RRRS 
Sbjct: 3   TVILPPQDCLGNGLRRQGLVLSAP-LKSRRNSKP--NPSSSTNPNFNHD-VSSGRRRRSP 62

Query: 64  EVGVKANRRVNRGRSRVVETSTA----AKISPKNLVMGQVKILKRGEMLCPDGGVG--DG 123
            VGVK+NR+ NRGRSR  E STA    AK+SPK LVMGQVKILKRGEML PD GVG  D 
Sbjct: 63  AVGVKSNRQANRGRSRSGEPSTAPSAAAKVSPKALVMGQVKILKRGEMLTPDRGVGGVDC 122

Query: 124 GKRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSV 183
           GKR LE K +D+DL LGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSV
Sbjct: 123 GKRRLELKADDMDLGLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSV 182

Query: 184 PLPSFLGKNGTATNDLRRLLRLDLD 202
           PLPSFLG NGTAT+DLRRLLRLDLD
Sbjct: 183 PLPSFLGNNGTATSDLRRLLRLDLD 203

[Close]

BLAST of Csor.00g270320 vs. ExPASy TrEMBL
Match: A0A6J1FBP4 (uncharacterized protein LOC111444161 OS=Cucurbita moschata OX=3662 GN=LOC111444161 PE=4 SV=1)

HSP 1 Score: 389 bits (998), Expect = 2.74e-136
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR 60
           MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR
Sbjct: 1   MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR 60

Query: 61  RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR 120
           RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR
Sbjct: 61  RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR 120

Query: 121 MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 180
           MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP
Sbjct: 121 MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 180

Query: 181 SFLGKNGTATNDLRRLLRLDLD 202
           SFLGKNGTATNDLRRLLRLDLD
Sbjct: 181 SFLGKNGTATNDLRRLLRLDLD 202

[Close]

BLAST of Csor.00g270320 vs. ExPASy TrEMBL
Match: A0A6J1HQ64 (uncharacterized protein LOC111465671 OS=Cucurbita maxima OX=3661 GN=LOC111465671 PE=4 SV=1)

HSP 1 Score: 388 bits (997), Expect = 3.89e-136
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR 60
           MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR
Sbjct: 1   MATTVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRR 60

Query: 61  RSSEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR 120
           RSSEVGVKANRRVNRGRSRV+ETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR
Sbjct: 61  RSSEVGVKANRRVNRGRSRVIETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKR 120

Query: 121 MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 180
           MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP
Sbjct: 121 MLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 180

Query: 181 SFLGKNGTATNDLRRLLRLDLD 202
           SFLGKNGTATNDLRRLLRLDLD
Sbjct: 181 SFLGKNGTATNDLRRLLRLDLD 202

[Close]

BLAST of Csor.00g270320 vs. ExPASy TrEMBL
Match: A0A6J1CPP9 (uncharacterized protein LOC111013161 OS=Momordica charantia OX=3673 GN=LOC111013161 PE=4 SV=1)

HSP 1 Score: 276 bits (706), Expect = 8.68e-92
Identity = 160/205 (78.05%), Postives = 169/205 (82.44%), Query Frame = 0


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRRSS 63
           TVIL PQDCLGNGLR QGLVLS+P LKSRRNS    + SSS NPNFN D  +   RRRS 
Sbjct: 3   TVILPPQDCLGNGLRRQGLVLSAP-LKSRRNSKP--NPSSSTNPNFNHD-VSSGRRRRSP 62

Query: 64  EVGVKANRRVNRGRSRVVETSTA----AKISPKNLVMGQVKILKRGEMLCPDGGVG--DG 123
            VGVK+NR+ NRGRSR  E STA    AK+SPK LVMGQVKILKRGEML PD GVG  D 
Sbjct: 63  AVGVKSNRQANRGRSRSGEPSTAPSAAAKVSPKALVMGQVKILKRGEMLTPDRGVGGVDC 122

Query: 124 GKRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSV 183
           GKR LE K +D+DL LGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSV
Sbjct: 123 GKRRLELKADDMDLGLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSV 182

Query: 184 PLPSFLGKNGTATNDLRRLLRLDLD 202
           PLPSFLG NGTAT+DLRRLLRLDLD
Sbjct: 183 PLPSFLGNNGTATSDLRRLLRLDLD 203

[Close]

BLAST of Csor.00g270320 vs. ExPASy TrEMBL
Match: A0A5A7VCB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00850 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 2.53e-89
Identity = 154/207 (74.40%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRR-S 63
           TVIL PQDCLG GLRHQGLVLS+P L SRRNSN  S+S+SS NPNFN DD +CSGRRR S
Sbjct: 3   TVILPPQDCLGKGLRHQGLVLSAP-LNSRRNSNPNSASTSS-NPNFNHDDKSCSGRRRRS 62

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGG---- 123
           + VG+KANR+ NR RSRV E+ST AK++ K+LVMGQVKILKRGE+L P  GVG GG    
Sbjct: 63  ASVGLKANRQANRERSRVRESSTTAKMTTKSLVMGQVKILKRGEILTPGRGVGGGGGGGD 122

Query: 124 ---KRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPS 183
              KR LESKVE++DLVLGSTDRLGPDPDLMQKQVV +E K  DG+YAGSGAFFASPPPS
Sbjct: 123 SCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFK--DGMYAGSGAFFASPPPS 182

Query: 184 SVPLPSFLGKNGTATNDLRRLLRLDLD 202
           SVPLPSF+ KNG AT DLRRLLRLDL+
Sbjct: 183 SVPLPSFVVKNGIATTDLRRLLRLDLE 205

[Close]

BLAST of Csor.00g270320 vs. ExPASy TrEMBL
Match: A0A1S3C5D8 (uncharacterized protein LOC103496651 OS=Cucumis melo OX=3656 GN=LOC103496651 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 2.53e-89
Identity = 154/207 (74.40%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRR-S 63
           TVIL PQDCLG GLRHQGLVLS+P L SRRNSN  S+S+SS NPNFN DD +CSGRRR S
Sbjct: 3   TVILPPQDCLGKGLRHQGLVLSAP-LNSRRNSNPNSASTSS-NPNFNHDDKSCSGRRRRS 62

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGG---- 123
           + VG+KANR+ NR RSRV E+ST AK++ K+LVMGQVKILKRGE+L P  GVG GG    
Sbjct: 63  ASVGLKANRQANRERSRVRESSTTAKMTTKSLVMGQVKILKRGEILTPGRGVGGGGGGGD 122

Query: 124 ---KRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPS 183
              KR LESKVE++DLVLGSTDRLGPDPDLMQKQVV +E K  DG+YAGSGAFFASPPPS
Sbjct: 123 SCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFK--DGMYAGSGAFFASPPPS 182

Query: 184 SVPLPSFLGKNGTATNDLRRLLRLDLD 202
           SVPLPSF+ KNG AT DLRRLLRLDL+
Sbjct: 183 SVPLPSFVVKNGIATTDLRRLLRLDLE 205

[Close]

BLAST of Csor.00g270320 vs. TAIR 10
Match: AT4G32020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-12
Identity = 67/197 (34.01%), Postives = 88/197 (44.67%), Query Frame = 0


Query: 6   ILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRRSSEV 65
           +L PQDCL +   H      +P     R    +S++ +  +P  +Q         RSS  
Sbjct: 5   VLNPQDCLKDPFSHM-KQHRNPSACPNRQKKTVSNNRTRRSPPRSQSS-------RSSSP 64

Query: 66  GVKANRRVNRGR-SRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKRMLES 125
            V       R   S  V   T  K     + + QV+ILKRGE +          K   + 
Sbjct: 65  PVAPPLPPPRAAVSAFVPKGTLKKSLSNTVAVSQVRILKRGEEI---------PKETSDL 124

Query: 126 KVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLPSFLG 185
            VE  D  LGST R+GPDP L+  Q+  S  K     +        SPPPS VPLP+F  
Sbjct: 125 VVEMSD--LGSTRRIGPDPGLIPGQIRLSGRKSKSAPFYAGPVTMTSPPPSDVPLPAFFT 180

Query: 186 KNGTATNDLRRLLRLDL 202
           K   ATNDL R+LRLD+
Sbjct: 185 KK--ATNDLIRILRLDI 180

[Close]

BLAST of Csor.00g270320 vs. TAIR 10
Match: AT4G02040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30 Blast hits to 30 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 4.0e-12
Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 75  RGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLC-----PDGGVGDGGKRMLESKVEDL 134
           R +S  V  S AA     NLVM QVKILKRGE L       +    D  +R +   ++D+
Sbjct: 39  RKQSPTVVKSPAAN---PNLVMEQVKILKRGETLSAFNKNKENISSDDTRRPVLKMIKDV 98

Query: 135 DLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFA-SPPPSSVPLPSFLG 185
           DL++ +T+R+GP+P+++ KQ+       A G+ + +GA  + SPPPS VP+P FLG
Sbjct: 99  DLIVSATNRIGPEPEILMKQI------GALGLQSFAGANCSLSPPPSCVPIPCFLG 145

[Close]

BLAST of Csor.00g270320 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 7.2e-06
Identity = 32/67 (47.76%), Postives = 37/67 (55.22%), Query Frame = 0


Query: 152 FSELKV--------ADGIYAGSGAFFASPPPSSVPLPSFLGK-----------NGTATND 200
           FS +KV        AD IYAGS  F  SP PSS+PLPSF  K           + +A+ D
Sbjct: 68  FSNIKVRKYSPEVSADDIYAGSSIFAVSPAPSSLPLPSFSKKKAKSQVVVVSIDDSASQD 127

The following BLAST results are available for this feature:

BLAST of Csor.00g270320 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g270320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937911.1	5.65e-136	100.00	uncharacterized protein LOC111444161 [Cucurbita moschata] >KAG6586356.1 hypothet...	[more]
XP_022965945.1	8.03e-136	99.50	uncharacterized protein LOC111465671 [Cucurbita maxima]	[more]
XP_023537567.1	3.14e-133	99.01	uncharacterized protein LOC111798562 [Cucurbita pepo subsp. pepo]	[more]
XP_038890387.1	1.67e-101	82.27	uncharacterized protein LOC120079968 [Benincasa hispida]	[more]
XP_022143251.1	1.79e-91	78.05	uncharacterized protein LOC111013161 [Momordica charantia]	[more]

BLAST of Csor.00g270320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBP4	2.74e-136	100.00	uncharacterized protein LOC111444161 OS=Cucurbita moschata OX=3662 GN=LOC1114441...	[more]
A0A6J1HQ64	3.89e-136	99.50	uncharacterized protein LOC111465671 OS=Cucurbita maxima OX=3661 GN=LOC111465671...	[more]
A0A6J1CPP9	8.68e-92	78.05	uncharacterized protein LOC111013161 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A5A7VCB7	2.53e-89	74.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C5D8	2.53e-89	74.40	uncharacterized protein LOC103496651 OS=Cucumis melo OX=3656 GN=LOC103496651 PE=...	[more]

BLAST of Csor.00g270320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32020.1	1.0e-12	34.01	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02040.1	4.0e-12	40.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G21570.1	7.2e-06	47.76	unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..78
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 1..201
None	No IPR available	PANTHER	PTHR33670:SF15	OS02G0797600 PROTEIN	coord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g270320.m01	Csor.00g270320.m01	mRNA