Csor.00g269940 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g269940
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	Csor_Chr12: 15540043 .. 15543786 (-)
RNA-Seq Expression	Csor.00g269940
Synteny	Csor.00g269940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATATTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATGCCTCAACCAAGCCCAACCCTGGTATGTTCTTCTCTAATCCTGCTTTTGTTTCTATTAATTCCCTTTCAAGATGTGTTTATAGCCATTTCTTTTCCCATTTTGTAGGGGTTTTTGTTGGCAACTCAGTGCCCCAGAAGGCTTTTCGGATCAATGAAGCGTTTCAAAGAACAAACCCCAGGAAGCTTTTGTCCGTTGAGGTCAAGGTATGGTTTCTCTGGACATTTCTTGTTAAATTCTCTTCGTTCTTGTGCAATGAACTTGATTGGTTATGGCTGATTTATGTACAAATTGTAGCACTGGAAATCATGGGATTGTCTGTAGCTCTATACTGAATGTCCTAGATGAAGGATTTAATTAGGAACTTCTTAACGTAGGAATGGAAGAGCATGTTTGAACAACCATTAGCTAGGTAGATGAGAATTGATTGAGTTTGAAATAAGGTTTGCGAATCGAAACTGTCCGAATCGAGTTGATTTTATCATTTTTTTCCTTTGGGATATTTGATTCTCTAAGTTTTTCGTCGAAGTTACAATGTCTTAACTATTGGTGAGAGAGAAGAACGAAACATTCCTTATAAGAGTGTGGAAACCTCTCTCTAGTAGACACGTTTTAAAACCGTGAGGTTGACGGCGATATGTAACGAGTCAATAGCAGACAATGTTTGCTAGTGATGGGTTTGGGCAGTTACAAATGGTATTAGAGCCAGGACCATGTGTTAGCGTGGACACTGGTCTCCCAAGGGAGGTGGATTGTGAAATCCCACTTTGGTTGGAGAGGGAAACGAAACATTTCTTATAAAGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGAGGTTGACAACGATATGTAATGGGCCAAAGCGGACAATATCTACTAGCGGTGGACTTGGGCTGTTACAAATGGTATCAGAGCCAGTCACTAGATGGTGTGTAAGCGAGGACGCTGGCCCGCAATGGGGGTGGATTGTGAGATCCTACATTGGTTGGAGAGGGGAACGGAACATTTCTTATAAGAGTGTGGAAACCTCTCCCTAGTAGTGCGTTTTAAAACCATGAGGTTGACAACGATACGTAATGGGCCGAAGCGGACAATGTCTACTAGCGTGGACTTGGGCTGTTACAAATTGTATTAGAGTCAGTCATCGGATGGTGTGCCAACGAGGATGTTGGGCCCCAATGGGGTGGATTGTGAGATGCTACATTGGTTGGAGAGGGGAATGAAACATTTCTTATAAGAGTGTGGAAACCTCTCCCTAGTAGTGCATTTTAAAACCGTGAGGCTGACGACGATACGTATGGGACAAAGCGGACAATCTCTACTAGTGGTGGACTTGGGCTGTTACAAATGGTATTAGAGCCAGTCACTGGACAGTGTGCAAGTGAGGACGCTGGCCCCCCAATGAGGGTGGATTGTGAGACCCTACATTGGTTGGAGAGGGGAACGAAACATTTTTTATAAGGGTGTGGAAACCTCTCTCTAGTTGTGCGTTTTAAAACTGTGAGGCTGACGGGGATACATAACAGGCCAAAGCGGACAATATCTGCTAGCAGTGGGCTTGCGTTATGTTTGGTTCAATGGATTTGAAGTGTAATGGTTGTTGGTTTCTTTTTCAGTTTGTTTGAATGTGTTATAATCTTGCTTTGGCAGGCTTCAGATGGTGCAGATAGTAATAAACCAACCACAAAATACAAGAGCATAGTTTGCACAGACTGCGATGGAAATGGTAAGTGAAATCCTTATAGAAAGTTGAGACTATGTTCATACTTATAAGAAACCAAATATGGTAGGAAATAGAGCTAAAGATCAACTGATTACCTTCGATCTTAATGCTTTTCGCATTCGGGGTACAATTGAGATGCCGTTTCGGGGGTTATCATAGAGGAACTGTCCGACATAAGGCAAGTGATGAGACATAGGAATTCCCCACGATGAGAAGGACGGCCTCGGTCCAATGCCACTCAGAAGTAGAAGCTGTGGGCTTCCGAGAGCCCCAGCACAGAGGATCACCTCTCCCTTTTCACGCACCATTGTTTACACTGTTTTCGTCTACACGTTCGTTTCTTGGGGCCGTGTCTCCAATGTTCTTGGATCAGCTCGAGGTTCCTCGTTCCGTGGATAGTTTGAGTTTACTGATTTTTTTCCCTCAATTTTCAGGTGCTGTCCAATGTGCTCAGTGTCAAGGAACAGGAGTGAATTCAGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGGTATGCACAAAAAGCTCTACCTGCTTTTAATGATATTTTGTCCACCTTACTCTTTAGTAGAACTATAAATTACCATTAGCATGTCCTTAAACTCTCACAAGCTCGACTCGGGAGCTAAAAAGGTCAAATTTATGTTATGTGGGTTAAAGTCCGATTCTGATGACTCATCTATTTAGAGGGCGTTTAGTTCTAACTAGAGTGTTGTAACTCAGAGTTGAAAAGGTCGAACTTATGTTTTGTGGCTTAAAGTCCGATTCTGATGAGTCAATGAGTCATCTCCTTAGAGGGCGTTTAGCTCTCTAACTAGAGTATTGTAGCTCAGAGCTAAAAAAGTCAAACTTGTGTTATGTGGGTTAAAGTCCGATTCTGATGATTCAATGAGTCATCTACTTAGAGGACGTTTAGCTCACTAACTAGAGTATCGTAACTCAGAGCTAAAAAAGTCGAACTTGTGTTATGTGGGTTAAAGTTCGATTTTGATGATTCAATGAGTCATCTACTTAAAGGGCATTTAGCTCATGAGCTAGAGTACTATAACTCGGAGCTAAAAGGGTCAAATTTATGTTATGTGTGTTAAAGCCTGATTCTCATGACTCAATGAGTCATCTACTTAGAGGGTGTTTAACTCACGGACTAGAGTACTGTAACTCGGAGCTGAAAAGGTCGAACTTATGTTATGTGGGTTAAAGTCCGATTTTGATGATTCCATGAGTCATCTACTTAGAGGACGTTTAGCTCTCTAACTAGAGTGCAGTAACTCAGAGCTTAAAAGGTCAAACTTATGTTATGTGGGTTAAAGTTCGAATCTGATAACTCAATGAGTCATCTACTTAGAGGGCATTTAGCTCACTAACTAGAGTACTGTAACTCGGAGCTAAAAAGGTTGAACTTATGTTATGTGGGTTAAAGTCCAATTATGATGACTCAACGAGTCATCGACTTAGAGGGTGTTTAGCTCACTAACTAGAGTACTACAACTCAGAGCTAAAAAAGTCAAACACCTTGTGTTATGTGGGTTAAAGTTCGATTCTGATGACTCAATGAGTCATCTACTTAGAGGGCGTTTAGTTCACTGTAACTCAGAGCTAAAAAGGTCGAACTTATGTTATGTGGATTAAAGTCCAGTTTCAATGACGACCTTGATGAGTCATCTACTCAAAGGACGTCTGTCTCACAAACTAGACTACTGTAACCCGAAGCTAAAAAGATCAAGCTTATGTCATGAGGGTCAAAACCACTGCATCTATTATCCACGAGTCTAGTCATGTATGCATAATCACGACCATGGTTCATTTCGGGTCTTTCGGGATTTCGTATAGAATTAACGATACTGAGGGTACCGTGATGAACATTGCAGAGGCAAAAGGGACATCCTGTGTGGTGGCTGTAATGGAGCAGGTTTTGTGGGTGGATTCATGAGTACAGCTGATAGTTAG

mRNA sequence

ATGGCATATTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATGCCTCAACCAAGCCCAACCCTGGGGTTTTTGTTGGCAACTCAGTGCCCCAGAAGGCTTTTCGGATCAATGAAGCGTTTCAAAGAACAAACCCCAGGAAGCTTTTGTCCGTTGAGGTCAAGGCTTCAGATGGTGCAGATAGTAATAAACCAACCACAAAATACAAGAGCATAGTTTGCACAGACTGCGATGGAAATGGTGCTGTCCAATGTGCTCAGTGTCAAGGAACAGGAGTGAATTCAGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAGGCAAAAGGGACATCCTGTGTGGTGGCTGTAATGGAGCAGGTTTTGTGGGTGGATTCATGAGTACAGCTGATAGTTAG

Coding sequence (CDS)

ATGGCATATTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATGCCTCAACCAAGCCCAACCCTGGGGTTTTTGTTGGCAACTCAGTGCCCCAGAAGGCTTTTCGGATCAATGAAGCGTTTCAAAGAACAAACCCCAGGAAGCTTTTGTCCGTTGAGGTCAAGGCTTCAGATGGTGCAGATAGTAATAAACCAACCACAAAATACAAGAGCATAGTTTGCACAGACTGCGATGGAAATGGTGCTGTCCAATGTGCTCAGTGTCAAGGAACAGGAGTGAATTCAGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAGGCAAAAGGGACATCCTGTGTGGTGGCTGTAATGGAGCAGGTTTTGTGGGTGGATTCATGAGTACAGCTGATAGTTAG

Protein sequence

MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGADSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

Homology

[Close]

BLAST of Csor.00g269940 vs. ExPASy Swiss-Prot
Match: Q9XF14 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-29
Identity = 57/90 (63.33%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 48  KLLSVEVKASDGADSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGG 107
           K L ++ KA++   S K   K KSI+C DC+GNGA+ C +C+G GVNS D+F GRFKAG 
Sbjct: 36  KNLCIKTKATENDQSAKKHQKVKSILCQDCEGNGAIVCTKCEGNGVNSVDYFEGRFKAGS 95

Query: 108 LCWLCRGKRDILCGGCNGAGFVGGFMSTAD 138
           LCWLCRGKR+ILCG CNGAGF+GGF+ST D
Sbjct: 96  LCWLCRGKREILCGNCNGAGFLGGFLSTFD 125

[Close]

BLAST of Csor.00g269940 vs. ExPASy Swiss-Prot
Match: Q9SN73 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 70/141 (49.65%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 1   MAYSIC--SSTPICSFNASTK-PNPGVFVG-NSVPQKAFRINEAFQRTNPRKLLSVEVKA 60
           MA S+C  SS P   F + +K P P  F   N       +  E  Q +  +   S EVKA
Sbjct: 1   MANSLCFFSSPPTFCFQSPSKNPKPSHFFSTNDNTSSLVQKRELLQTSRSQ---SFEVKA 60

Query: 61  SDGADSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKR 120
              A++N   TK  S+VC +C+G G V C+QC+G GVN  DHFNG+FKAG LCWLCRGK+
Sbjct: 61  ---ANNNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCRGKK 120

Query: 121 DILCGGCNGAGFVGGFMSTAD 138
           ++LCG CNGAGF+GGF+ST D
Sbjct: 121 EVLCGDCNGAGFIGGFLSTFD 135

[Close]

BLAST of Csor.00g269940 vs. NCBI nr
Match: KAG6586393.1 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290 bits (743), Expect = 3.40e-99
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60
           MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120
           DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC
Sbjct: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of Csor.00g269940 vs. NCBI nr
Match: XP_022938233.1 (uncharacterized protein LOC111444376 [Cucurbita moschata])

HSP 1 Score: 288 bits (736), Expect = 3.97e-98
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60
           MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120
            SNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC
Sbjct: 61  GSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of Csor.00g269940 vs. NCBI nr
Match: XP_022965999.1 (uncharacterized protein LOC111465718 [Cucurbita maxima])

HSP 1 Score: 286 bits (732), Expect = 1.62e-97
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60
           MAYSICSSTPI SFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA
Sbjct: 1   MAYSICSSTPIFSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120
           DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC
Sbjct: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of Csor.00g269940 vs. NCBI nr
Match: XP_023537582.1 (uncharacterized protein LOC111798573 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283 bits (725), Expect = 1.89e-96
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60
           MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKAS+ A
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASNDA 60

Query: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120
           DS KPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC
Sbjct: 61  DSTKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of Csor.00g269940 vs. NCBI nr
Match: XP_004139310.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN60678.1 hypothetical protein Csa_019244 [Cucumis sativus])

HSP 1 Score: 251 bits (641), Expect = 1.19e-83
Identity = 121/138 (87.68%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60
           MA+SICSSTPICSFN S+ P PGV VGNSVPQKAFRINEAFQ+TN  +LLS EVKASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRINEAFQKTNSIRLLSFEVKASDGA 60

Query: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120
           DS K TTKYKSIVCTDCDGNGAVQC+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRDILC
Sbjct: 61  DS-KQTTKYKSIVCTDCDGNGAVQCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 137

[Close]

BLAST of Csor.00g269940 vs. ExPASy TrEMBL
Match: A0A6J1FIB2 (uncharacterized protein LOC111444376 OS=Cucurbita moschata OX=3662 GN=LOC111444376 PE=4 SV=1)

HSP 1 Score: 288 bits (736), Expect = 1.92e-98
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60
           MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120
            SNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC
Sbjct: 61  GSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of Csor.00g269940 vs. ExPASy TrEMBL
Match: A0A6J1HSG2 (uncharacterized protein LOC111465718 OS=Cucurbita maxima OX=3661 GN=LOC111465718 PE=4 SV=1)

HSP 1 Score: 286 bits (732), Expect = 7.84e-98
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60
           MAYSICSSTPI SFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA
Sbjct: 1   MAYSICSSTPIFSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120
           DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC
Sbjct: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of Csor.00g269940 vs. ExPASy TrEMBL
Match: A0A0A0LFZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006240 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 5.75e-84
Identity = 121/138 (87.68%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60
           MA+SICSSTPICSFN S+ P PGV VGNSVPQKAFRINEAFQ+TN  +LLS EVKASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRINEAFQKTNSIRLLSFEVKASDGA 60

Query: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120
           DS K TTKYKSIVCTDCDGNGAVQC+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRDILC
Sbjct: 61  DS-KQTTKYKSIVCTDCDGNGAVQCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 137

[Close]

BLAST of Csor.00g269940 vs. ExPASy TrEMBL
Match: A0A6J1CMI1 (uncharacterized protein LOC111012989 OS=Momordica charantia OX=3673 GN=LOC111012989 PE=4 SV=1)

HSP 1 Score: 250 bits (638), Expect = 1.70e-83
Identity = 117/138 (84.78%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60
           MAYSICSSTPICSFNAS KP PGVFV N V +KAF+ NEAFQRTNP ++LS EVKAS G+
Sbjct: 1   MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGS 60

Query: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120
           DSN+PTTKYKSI+C DC+GNGAV C+QC+GTGVNSEDHFNGRFKAGGLCWLCRGKRDILC
Sbjct: 61  DSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of Csor.00g269940 vs. ExPASy TrEMBL
Match: A0A5A7V544 (Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00260 PE=4 SV=1)

HSP 1 Score: 244 bits (623), Expect = 3.19e-81
Identity = 117/138 (84.78%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60
           MA+SICSSTPICSFN S+ P PGV VGNSVPQKAFR+NEA QRTNP + LS E KASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60

Query: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120
           DS K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRD+LC
Sbjct: 61  DS-KQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 137

[Close]

BLAST of Csor.00g269940 vs. TAIR 10
Match: AT3G47650.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 8.4e-30
Identity = 70/141 (49.65%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 1   MAYSIC--SSTPICSFNASTK-PNPGVFVG-NSVPQKAFRINEAFQRTNPRKLLSVEVKA 60
           MA S+C  SS P   F + +K P P  F   N       +  E  Q +  +   S EVKA
Sbjct: 1   MANSLCFFSSPPTFCFQSPSKNPKPSHFFSTNDNTSSLVQKRELLQTSRSQ---SFEVKA 60

Query: 61  SDGADSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKR 120
              A++N   TK  S+VC +C+G G V C+QC+G GVN  DHFNG+FKAG LCWLCRGK+
Sbjct: 61  ---ANNNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCRGKK 120

Query: 121 DILCGGCNGAGFVGGFMSTAD 138
           ++LCG CNGAGF+GGF+ST D
Sbjct: 121 EVLCGDCNGAGFIGGFLSTFD 135

The following BLAST results are available for this feature:

BLAST of Csor.00g269940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF14	2.4e-29	63.33	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=...	[more]
Q9SN73	1.2e-28	49.65	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Csor.00g269940 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6586393.1	3.40e-99	100.00	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022938233.1	3.97e-98	99.28	uncharacterized protein LOC111444376 [Cucurbita moschata]	[more]
XP_022965999.1	1.62e-97	99.28	uncharacterized protein LOC111465718 [Cucurbita maxima]	[more]
XP_023537582.1	1.89e-96	97.83	uncharacterized protein LOC111798573 [Cucurbita pepo subsp. pepo]	[more]
XP_004139310.1	1.19e-83	87.68	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN60678.1 h...	[more]

BLAST of Csor.00g269940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIB2	1.92e-98	99.28	uncharacterized protein LOC111444376 OS=Cucurbita moschata OX=3662 GN=LOC1114443...	[more]
A0A6J1HSG2	7.84e-98	99.28	uncharacterized protein LOC111465718 OS=Cucurbita maxima OX=3661 GN=LOC111465718...	[more]
A0A0A0LFZ2	5.75e-84	87.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006240 PE=4 SV=1	[more]
A0A6J1CMI1	1.70e-83	84.78	uncharacterized protein LOC111012989 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A5A7V544	3.19e-81	84.78	Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of Csor.00g269940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47650.1	8.4e-30	49.65	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 1..131
None	No IPR available	PANTHER	PTHR15852:SF65	PROTEIN P13.9, PUTATIVE-RELATED	coord: 1..131
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 68..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g269940.m01	Csor.00g269940.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0101031	chaperone complex
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0044183	protein folding chaperone