Csor.00g268800 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g268800
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr05: 6939133 .. 6939357 (-)
RNA-Seq ExpressionCsor.00g268800
SyntenyCsor.00g268800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCATTCCAATTTGGCCTTGCCCAACTACCCAGCCACGACCAGACCTGAACACCCACGCCTCTCCTTCGACTCTGCACATGCTCGATGTGAGCTCTGTCTCACTGTAGCTCAAACTCAACTTAGCTTCGGCGCATGTGGTGGGTCATTCGGCTCGACTTCTTGGCTCACTTTGGTGGGGCTTAATGGCTCGGAGCGGTGGCTTGACGGCTCGACTTCTTAG

mRNA sequence

ATGATCCATTCCAATTTGGCCTTGCCCAACTACCCAGCCACGACCAGACCTGAACACCCACGCCTCTCCTTCGACTCTGCACATGCTCGATGTGAGCTCTGTCTCACTGTAGCTCAAACTCAACTTAGCTTCGGCGCATGTGGTGGGTCATTCGGCTCGACTTCTTGGCTCACTTTGGTGGGGCTTAATGGCTCGGAGCGGTGGCTTGACGGCTCGACTTCTTAG

Coding sequence (CDS)

ATGATCCATTCCAATTTGGCCTTGCCCAACTACCCAGCCACGACCAGACCTGAACACCCACGCCTCTCCTTCGACTCTGCACATGCTCGATGTGAGCTCTGTCTCACTGTAGCTCAAACTCAACTTAGCTTCGGCGCATGTGGTGGGTCATTCGGCTCGACTTCTTGGCTCACTTTGGTGGGGCTTAATGGCTCGGAGCGGTGGCTTGACGGCTCGACTTCTTAG

Protein sequence

MIHSNLALPNYPATTRPEHPRLSFDSAHARCELCLTVAQTQLSFGACGGSFGSTSWLTLVGLNGSERWLDGSTS
Homology
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BLAST of Csor.00g268800 vs. NCBI nr
Match: KAG6599015.1 (hypothetical protein SDJN03_08793, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 157 bits (396), Expect = 2.72e-48
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MIHSNLALPNYPATTRPEHPRLSFDSAHARCELCLTVAQTQLSFGACGGSFGSTSWLTLV 60
          MIHSNLALPNYPATTRPEHPRLSFDSAHARCELCLTVAQTQLSFGACGGSFGSTSWLTLV
Sbjct: 1  MIHSNLALPNYPATTRPEHPRLSFDSAHARCELCLTVAQTQLSFGACGGSFGSTSWLTLV 60

Query: 61 GLNGSERWLDGSTS 74
          GLNGSERWLDGSTS
Sbjct: 61 GLNGSERWLDGSTS 74

The following BLAST results are available for this feature:
BLAST of Csor.00g268800 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g268800 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599015.12.72e-48100.00hypothetical protein SDJN03_08793, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g268800 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g268800 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g268800.m01Csor.00g268800.m01mRNA