Csor.00g268370 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g268370
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRibulose-phosphate 3-epimerase
LocationCsor_Chr15: 388923 .. 390177 (-)
RNA-Seq ExpressionCsor.00g268370
SyntenyCsor.00g268370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTCATGTGCTTCCCTTTGCAGTAAATCGGAATGCTCCGCCGTGAAGCCACCGCCGGCGCCGTCGGAGTCTGTGAAGGACAAGTTTGAGATTCCACCTTCACCGATCAAACACTACAAGCTCCAAGACAACGCCGATTCTGTCTTCAAGGACATCTCTGTAGTACCCCATCACCACAAGACGCCTTCTGGTTCGATTCTTCTTCGCTCTTTTCTGGGTTTTGTTTTCCTCTCTGTTCTCTTTCCGCCGCGCCATTCCTGGATTGCCCTGTTTCTTCAATCTGTTTGTTCTTCACAGGCAGCAAAGAAGAAGCCTTCTTTGATTCTCGAGCGTGGTTGGATTCCGATTGTGAAGATTTCTTCAGTGTCAAAGGAGGTGACCATCATCATCCAAGATTTCAATTTCCTTTTTCAGATTATTTAGATTCATAAATCACAAATTAATGGTAATAGAATTGTTTTAGCTCAAATCATGTAAGCATGGAGGTTTGAATTGTAGGTCGGATTAAAAACAAACATATATTCTTTAAAAGATTTAAATTTGATTTTCATCATCAACTTTTGTATTTTTAAACTTGCTTTAAATTTATATATTAATTAAAAGTACTTTTTAAAAACTATGTTGAGGATGGTTATATATTTTAAAGTTTACTCATTTTAGTTTTGAAGTTTGTTCCCTCCCTTGTATTTTTAATTCTTGAAATACAAAAAATAACTATTTTAGTTAGAAATAATTATTGAGTAAACTAAATTTAAGATTAAAAAAAAAAATAACATACCAATATGATGAAAATAATTATTTATTCAAGTATAATAAGTTTGAAATACTAAAACTTAAATTTAAACCTTATACAGATTTCACCCCATCCAGAGACAATACTCCAATTCACCACCGCTTTACGGCGGGAACTCCCCGAGCTAGCCAAGCCGGTGCCGACGACAAACCATCTACATTCAACTCGTCGCCATTACCGACGAAGAGGAGGAAGAAACTGGCTGATCTATTCCGAGAGAGCCTCGGAGATGAGGCGAGTTTTGCTTTCCTAAATCACGACGACAATCGGAAAACCGATGAGCCTTGCCTTCCGGGAACTGGTTCGGTCTGCAATAGCGAGAGGACAGTCGGCAACGGCGTTGATGACAAAAATATGATCGGATTTGAGTCGAAGTTCTGTTGCCTTCCGCCGCTGGTTTCGCGTAACAGTTGGCGCGAGAGGAAGGAGGAATTGAAGGTTGTTAATGGCGTATCTTGA

mRNA sequence

ATGGGCTCATGTGCTTCCCTTTGCAGTAAATCGGAATGCTCCGCCGTGAAGCCACCGCCGGCGCCGTCGGAGTCTGTGAAGGACAAGTTTGAGATTCCACCTTCACCGATCAAACACTACAAGCTCCAAGACAACGCCGATTCTGTCTTCAAGGACATCTCTGTAGTACCCCATCACCACAAGACGCCTTCTGGCAGCAAAGAAGAAGCCTTCTTTGATTCTCGAGCGTGGTTGGATTCCGATTGTGAAGATTTCTTCAGTGTCAAAGGAGATTTCACCCCATCCAGAGACAATACTCCAATTCACCACCGCTTTACGGCGGGAACTCCCCGAGCTAGCCAAGCCGGTGCCGACGACAAACCATCTACATTCAACTCGTCGCCATTACCGACGAAGAGGAGGAAGAAACTGGCTGATCTATTCCGAGAGAGCCTCGGAGATGAGGCGAGTTTTGCTTTCCTAAATCACGACGACAATCGGAAAACCGATGAGCCTTGCCTTCCGGGAACTGGTTCGGTCTGCAATAGCGAGAGGACAGTCGGCAACGGCGTTGATGACAAAAATATGATCGGATTTGAGTCGAAGTTCTGTTGCCTTCCGCCGCTGGTTTCGCGTAACAGTTGGCGCGAGAGGAAGGAGGAATTGAAGGTTGTTAATGGCGTATCTTGA

Coding sequence (CDS)

ATGGGCTCATGTGCTTCCCTTTGCAGTAAATCGGAATGCTCCGCCGTGAAGCCACCGCCGGCGCCGTCGGAGTCTGTGAAGGACAAGTTTGAGATTCCACCTTCACCGATCAAACACTACAAGCTCCAAGACAACGCCGATTCTGTCTTCAAGGACATCTCTGTAGTACCCCATCACCACAAGACGCCTTCTGGCAGCAAAGAAGAAGCCTTCTTTGATTCTCGAGCGTGGTTGGATTCCGATTGTGAAGATTTCTTCAGTGTCAAAGGAGATTTCACCCCATCCAGAGACAATACTCCAATTCACCACCGCTTTACGGCGGGAACTCCCCGAGCTAGCCAAGCCGGTGCCGACGACAAACCATCTACATTCAACTCGTCGCCATTACCGACGAAGAGGAGGAAGAAACTGGCTGATCTATTCCGAGAGAGCCTCGGAGATGAGGCGAGTTTTGCTTTCCTAAATCACGACGACAATCGGAAAACCGATGAGCCTTGCCTTCCGGGAACTGGTTCGGTCTGCAATAGCGAGAGGACAGTCGGCAACGGCGTTGATGACAAAAATATGATCGGATTTGAGTCGAAGTTCTGTTGCCTTCCGCCGCTGGTTTCGCGTAACAGTTGGCGCGAGAGGAAGGAGGAATTGAAGGTTGTTAATGGCGTATCTTGA

Protein sequence

MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHHKTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTVGNGVDDKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS
Homology
BLAST of Csor.00g268370 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.6e-13
Identity = 56/128 (43.75%), Postives = 69/128 (53.91%), Query Frame = 0

Query: 23  SESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHHKTPSGSKEEAFFDSRAWLDSDC 82
           S SVK  FE   SP K   +  N +             K   GSK+E FFDS+ WL SD 
Sbjct: 40  SPSVKKSFE---SPRKSTSIPANNNLTPVKSRWSFSSSKKSFGSKDETFFDSQPWLQSDS 99

Query: 83  -EDFFSVKGDFTPSRDNTPIHHRFTAGTPR-ASQAGADDKPSTFNSSPLPTKRRKKLADL 142
            +DF SV GDFTPS  NTP    F+   PR  +    + KPS  +SSP P  RRKKL +L
Sbjct: 100 DDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGEL 159

Query: 143 FRESLGDE 149
           FR+S+ +E
Sbjct: 160 FRDSIREE 163

BLAST of Csor.00g268370 vs. NCBI nr
Match: KAG6578372.1 (hypothetical protein SDJN03_22820, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 461 bits (1187), Expect = 3.98e-164
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0

Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH
Sbjct: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK 120
           KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK 120

Query: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTV 180
           PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTV
Sbjct: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTV 180

Query: 181 GNGVDDKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS 222
           GNGVDDKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS
Sbjct: 181 GNGVDDKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS 222

BLAST of Csor.00g268370 vs. NCBI nr
Match: XP_022992625.1 (uncharacterized protein LOC111488914 [Cucurbita maxima])

HSP 1 Score: 430 bits (1106), Expect = 8.93e-152
Identity = 210/222 (94.59%), Postives = 213/222 (95.95%), Query Frame = 0

Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCS  ECSAVKPPPAP E+V DKFEIPPSPIKHYKLQDNADSVFKDISVVP HH
Sbjct: 1   MGSCASLCSTPECSAVKPPPAPLETVTDKFEIPPSPIKHYKLQDNADSVFKDISVVPPHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK 120
           KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRF AGTPRASQAGADDK
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFPAGTPRASQAGADDK 120

Query: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTV 180
           PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNH+DNRKTDEPCLPGTGSV NSERTV
Sbjct: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVRNSERTV 180

Query: 181 GNGVDDKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS 222
           GNGVDDKNMIGFESKFCCLPPLVSRN  RER+EELKVVNGVS
Sbjct: 181 GNGVDDKNMIGFESKFCCLPPLVSRNGSREREEELKVVNGVS 222

BLAST of Csor.00g268370 vs. NCBI nr
Match: XP_023550243.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423 bits (1088), Expect = 4.96e-149
Identity = 208/222 (93.69%), Postives = 212/222 (95.50%), Query Frame = 0

Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCS+SECS VKPPPAPSE+VKDKFEIPPSPIKHYKLQ NADSVFKDISVVPHHH
Sbjct: 1   MGSCASLCSQSECSPVKPPPAPSETVKDKFEIPPSPIKHYKLQHNADSVFKDISVVPHHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK 120
           KTPSGSKEEAFFDSRAWLDSD EDFFSVKGDFTPSRDNTPIHHRF AGTPRASQA ADDK
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDSEDFFSVKGDFTPSRDNTPIHHRFPAGTPRASQARADDK 120

Query: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTV 180
           PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNH+DNRKT+EPCLPGTGSV NSERTV
Sbjct: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHNDNRKTEEPCLPGTGSVRNSERTV 180

Query: 181 GNGVDDKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS 222
           GNGVDDKN IGFESKFCCL PLVSRN  RERKEELKVVNGVS
Sbjct: 181 GNGVDDKNTIGFESKFCCLWPLVSRNGSRERKEELKVVNGVS 222

BLAST of Csor.00g268370 vs. NCBI nr
Match: XP_022938376.1 (uncharacterized protein At3g27210-like [Cucurbita moschata])

HSP 1 Score: 418 bits (1074), Expect = 5.25e-147
Identity = 206/222 (92.79%), Postives = 210/222 (94.59%), Query Frame = 0

Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH
Sbjct: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK 120
           KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK 120

Query: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTV 180
           PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNH+DNRKTDEPCLPGTGSV       
Sbjct: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSV------- 180

Query: 181 GNGVDDKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS 222
           GNGV DKNMIG+ESKFCCL  LVSRN  RER+E+LKVVNGVS
Sbjct: 181 GNGVADKNMIGYESKFCCLARLVSRNGSREREEDLKVVNGVS 215

BLAST of Csor.00g268370 vs. NCBI nr
Match: XP_038884376.1 (uncharacterized protein At3g27210-like [Benincasa hispida])

HSP 1 Score: 351 bits (901), Expect = 1.40e-120
Identity = 174/222 (78.38%), Postives = 192/222 (86.49%), Query Frame = 0

Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MG+CAS+ ++SECSAVK P AP ES+ DKFEIPPSPIKH+KLQ+  DS  KDISV+ +HH
Sbjct: 1   MGTCASVYTRSECSAVKSP-APPESMTDKFEIPPSPIKHFKLQNKTDSAIKDISVISNHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK 120
           KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPS  NTP+HHRF A TPR S+ GAD++
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSKVGADNE 120

Query: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTV 180
           PSTFNS PL TKRRKKL DLFRESLG++ASFAFLNHDDNRK DEPCL GT SVC+SERT 
Sbjct: 121 PSTFNSPPLSTKRRKKLVDLFRESLGNDASFAFLNHDDNRKADEPCLSGTDSVCDSERTG 180

Query: 181 GNGVDDKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS 222
             G  D+N IGFESK CCLPPLVSRNS RERKE+LKVVNGVS
Sbjct: 181 SGG--DENPIGFESKLCCLPPLVSRNSSRERKEDLKVVNGVS 219

BLAST of Csor.00g268370 vs. ExPASy TrEMBL
Match: A0A6J1JW82 (uncharacterized protein LOC111488914 OS=Cucurbita maxima OX=3661 GN=LOC111488914 PE=4 SV=1)

HSP 1 Score: 430 bits (1106), Expect = 4.32e-152
Identity = 210/222 (94.59%), Postives = 213/222 (95.95%), Query Frame = 0

Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCS  ECSAVKPPPAP E+V DKFEIPPSPIKHYKLQDNADSVFKDISVVP HH
Sbjct: 1   MGSCASLCSTPECSAVKPPPAPLETVTDKFEIPPSPIKHYKLQDNADSVFKDISVVPPHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK 120
           KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRF AGTPRASQAGADDK
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFPAGTPRASQAGADDK 120

Query: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTV 180
           PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNH+DNRKTDEPCLPGTGSV NSERTV
Sbjct: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVRNSERTV 180

Query: 181 GNGVDDKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS 222
           GNGVDDKNMIGFESKFCCLPPLVSRN  RER+EELKVVNGVS
Sbjct: 181 GNGVDDKNMIGFESKFCCLPPLVSRNGSREREEELKVVNGVS 222

BLAST of Csor.00g268370 vs. ExPASy TrEMBL
Match: A0A6J1FCZ7 (uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC111444643 PE=4 SV=1)

HSP 1 Score: 418 bits (1074), Expect = 2.54e-147
Identity = 206/222 (92.79%), Postives = 210/222 (94.59%), Query Frame = 0

Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH
Sbjct: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK 120
           KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDK 120

Query: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTV 180
           PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNH+DNRKTDEPCLPGTGSV       
Sbjct: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSV------- 180

Query: 181 GNGVDDKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS 222
           GNGV DKNMIG+ESKFCCL  LVSRN  RER+E+LKVVNGVS
Sbjct: 181 GNGVADKNMIGYESKFCCLARLVSRNGSREREEDLKVVNGVS 215

BLAST of Csor.00g268370 vs. ExPASy TrEMBL
Match: A0A0A0LT18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406740 PE=4 SV=1)

HSP 1 Score: 332 bits (852), Expect = 2.60e-113
Identity = 165/228 (72.37%), Postives = 192/228 (84.21%), Query Frame = 0

Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MG+CASL ++SECSAVKPP AP ++  D+FEIPPSPIKH+KLQ+N DS  KDISV+P+HH
Sbjct: 1   MGTCASLYNRSECSAVKPP-APPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQ---AGA 120
           KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPS  NTP+HHRF A TPR S+   A A
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASA 120

Query: 121 DDKPSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSE 180
           D++ S FN  PLPTKRRKKLADLFRESLG+EASFAFLN ++NRK DEP + GT SVCNSE
Sbjct: 121 DNEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSE 180

Query: 181 RTVGNGVD---DKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS 222
           RT G+G++   D+N I  +SK CCLPPL SR+S RERKE+LK++NGVS
Sbjct: 181 RTAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS 227

BLAST of Csor.00g268370 vs. ExPASy TrEMBL
Match: A0A1S3B2S0 (uncharacterized protein LOC103485490 OS=Cucumis melo OX=3656 GN=LOC103485490 PE=4 SV=1)

HSP 1 Score: 311 bits (797), Expect = 5.34e-105
Identity = 159/228 (69.74%), Postives = 184/228 (80.70%), Query Frame = 0

Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MG+CASL ++SECSAVKPP AP E++ D+FEIPPSPIKH+KLQ+N DS  KDISV+P+HH
Sbjct: 1   MGTCASLYNRSECSAVKPP-APPETMTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGA--- 120
           KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPS  NTP+HHRF A TPR S+  A   
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSKVSASST 120

Query: 121 DDKPSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSE 180
           D++ S F+  PLP KRRKKLADLFRESLG+E SFAFLN ++NRK DE  + GT SVCNSE
Sbjct: 121 DNELSNFSLPPLPPKRRKKLADLFRESLGNEGSFAFLNDEENRKADEARVSGTDSVCNSE 180

Query: 181 RTVGNGVD---DKNMIGFESKFCCLPPLVSRNSWRERKEELKVVNGVS 222
           RT G G+D   D+N +   SK CCLP LVSR    ERKE+LK++NGVS
Sbjct: 181 RTAGEGMDQLVDENPMELNSKMCCLPALVSR----ERKEDLKLINGVS 223

BLAST of Csor.00g268370 vs. ExPASy TrEMBL
Match: A0A5A7UN11 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00290 PE=4 SV=1)

HSP 1 Score: 289 bits (740), Expect = 9.71e-96
Identity = 158/268 (58.96%), Postives = 183/268 (68.28%), Query Frame = 0

Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MG+CASL ++SECSAVKPP AP E++ D+FEIPPSPIKH+KLQ+N DS  KDISV+P+HH
Sbjct: 1   MGTCASLYNRSECSAVKPP-APPETMTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHH 60

Query: 61  KTPSGS----------------------------------------KEEAFFDSRAWLDS 120
           KTPSG                                         KEEAFFDSRAWLDS
Sbjct: 61  KTPSGLILLSLFFMGFVLFSVSFFPPWHFFDCSVSFFSPWHSLTPLKEEAFFDSRAWLDS 120

Query: 121 DCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGA---DDKPSTFNSSPLPTKRRKKL 180
           DCEDFFSVKGDFTPS  NTP+HHRF A TPR S+  A   D++ S F+  PLP KRRKKL
Sbjct: 121 DCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSKVSASSTDNELSNFSLPPLPPKRRKKL 180

Query: 181 ADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTVGNGVD---DKNMIGFES 222
           ADLFRESLG+E SFAFLN ++NRK DE  + GT SVCNSERT G G+D   D+N +   S
Sbjct: 181 ADLFRESLGNEGSFAFLNDEENRKADEARVSGTDSVCNSERTAGEGMDQLVDENPMELNS 240

BLAST of Csor.00g268370 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-15
Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 0

Query: 64  SGSKEE-AFFDSRAWLDSDC-EDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDKP 123
           SG+KE+  FFDSR WLDSDC +DF SV G+FTPSR  TP+HH+F   TP     G ++K 
Sbjct: 59  SGNKEDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTP---HQGEENKH 118

Query: 124 STFNSSPLPTKRRKKLADLFRESLGDE 149
                   PT  +K+L +LF+E+  +E
Sbjct: 119 GEEEEEASPTDNKKRLLELFKETQDEE 142

BLAST of Csor.00g268370 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 3.6e-14
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0

Query: 71  FFDSRAWLDSDC-EDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPL 130
           FFDSR WLDSDC +DF SV G+FTPSR  TP+HH+F   TP     G ++K         
Sbjct: 3   FFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTP---HQGEENKHGEEEEEAS 62

Query: 131 PTKRRKKLADLFRESLGDE 149
           PT  +K+L +LF+E+  +E
Sbjct: 63  PTDNKKRLLELFKETQDEE 78

BLAST of Csor.00g268370 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 4.7e-14
Identity = 56/128 (43.75%), Postives = 69/128 (53.91%), Query Frame = 0

Query: 23  SESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHHKTPSGSKEEAFFDSRAWLDSDC 82
           S SVK  FE   SP K   +  N +             K   GSK+E FFDS+ WL SD 
Sbjct: 40  SPSVKKSFE---SPRKSTSIPANNNLTPVKSRWSFSSSKKSFGSKDETFFDSQPWLQSDS 99

Query: 83  -EDFFSVKGDFTPSRDNTPIHHRFTAGTPR-ASQAGADDKPSTFNSSPLPTKRRKKLADL 142
            +DF SV GDFTPS  NTP    F+   PR  +    + KPS  +SSP P  RRKKL +L
Sbjct: 100 DDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGEL 159

Query: 143 FRESLGDE 149
           FR+S+ +E
Sbjct: 160 FRDSIREE 163

BLAST of Csor.00g268370 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 7.4e-12
Identity = 53/157 (33.76%), Postives = 84/157 (53.50%), Query Frame = 0

Query: 66  SKEEAFFDSRAWLDSDCE-DFFSVKGDFTPSRDNTPIHHRFTAGTPRA-SQAGADDKPS- 125
           SK+E +FDS  W  SD E DF+SV+GDFTPS  NTP     +   PR  S     +KP  
Sbjct: 89  SKDETYFDSHQWQQSDSEDDFYSVRGDFTPSVGNTP-RCSISEKLPRIHSPLFEGEKPRV 148

Query: 126 TFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHDD--NRKTDEPCLPGTGSVCNSERTV 185
           +F+ SP P  RRKKL +LFR+S+ +E +       +  + K+ +     +G +   E +V
Sbjct: 149 SFSHSPAP--RRKKLGELFRDSIREERAVILEESSEYQSEKSKKSSCDNSGELKVIEESV 208

Query: 186 GNGVDDKNMIGFESKFCCLPPLVS-RNSWRERKEELK 217
               + K+ + +  +  CLP   S + S  +++++ K
Sbjct: 209 KEKKNLKSPLNYHHR--CLPRFSSFKGSLMDKRKKKK 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LK326.6e-1343.75Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV... [more]
Match NameE-valueIdentityDescription
KAG6578372.13.98e-164100.00hypothetical protein SDJN03_22820, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022992625.18.93e-15294.59uncharacterized protein LOC111488914 [Cucurbita maxima][more]
XP_023550243.14.96e-14993.69uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo][more]
XP_022938376.15.25e-14792.79uncharacterized protein At3g27210-like [Cucurbita moschata][more]
XP_038884376.11.40e-12078.38uncharacterized protein At3g27210-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1JW824.32e-15294.59uncharacterized protein LOC111488914 OS=Cucurbita maxima OX=3661 GN=LOC111488914... [more]
A0A6J1FCZ72.54e-14792.79uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A0A0LT182.60e-11372.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406740 PE=4 SV=1[more]
A0A1S3B2S05.34e-10569.74uncharacterized protein LOC103485490 OS=Cucumis melo OX=3656 GN=LOC103485490 PE=... [more]
A0A5A7UN119.71e-9658.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT3G01860.12.5e-1548.28unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT3G01860.23.6e-1448.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT3G27210.14.7e-1443.75unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT5G40860.17.4e-1233.76unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..130
NoneNo IPR availablePANTHERPTHR34280:SF2OS01G0920100 PROTEINcoord: 1..216
IPR038947At3g27210-likePANTHERPTHR34280OS01G0920100 PROTEINcoord: 1..216

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g268370.m01Csor.00g268370.m01mRNA