Csor.00g267890 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g267890
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr15: 197300 .. 197740 (+)
RNA-Seq Expression	Csor.00g267890
Synteny	Csor.00g267890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTCCAGAAGACTTCAGCTTCCAACCCATCAATGGCGGCACCACCCCCATTACTGGATCACCTCCCCTATGGGGCCTGCCACAAAAACCAATGGGCCGCCATGAGAAAGAAGATGGTGGCTGTAGAAATGTTGGCTCTTCGGAAAAAAGAAGGAATGATAGCGATGAGGAAGAAGATGAGAAGATGGATGTGCTGTGGGAAGACTTCAATGAAGAATTGCTCAAGAATTTGAGTTCCAGATATGGGTCTGGAAGGTTGCCGGAACTGGAATACTCGGAGTCGAAGGAAGCAAAGAAAGACGGCGGAGGGCGCGGCGGCAGTAGTGGGGCACTGCTGTCGGCGAGGATGGCGGGTGTGGTAGTGATGATGAAGGTGCTGAAGAAGATTCTGTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACGTCGTGA

mRNA sequence

ATGGAAGCTCCAGAAGACTTCAGCTTCCAACCCATCAATGGCGGCACCACCCCCATTACTGGATCACCTCCCCTATGGGGCCTGCCACAAAAACCAATGGGCCGCCATGAGAAAGAAGATGGTGGCTGTAGAAATGTTGGCTCTTCGGAAAAAAGAAGGAATGATAGCGATGAGGAAGAAGATGAGAAGATGGATGTGCTGTGGGAAGACTTCAATGAAGAATTGCTCAAGAATTTGAGTTCCAGATATGGGTCTGGAAGGTTGCCGGAACTGGAATACTCGGAGTCGAAGGAAGCAAAGAAAGACGGCGGAGGGCGCGGCGGCAGTAGTGGGGCACTGCTGTCGGCGAGGATGGCGGGTGTGGTAGTGATGATGAAGGTGCTGAAGAAGATTCTGTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACGTCGTGA

Coding sequence (CDS)

ATGGAAGCTCCAGAAGACTTCAGCTTCCAACCCATCAATGGCGGCACCACCCCCATTACTGGATCACCTCCCCTATGGGGCCTGCCACAAAAACCAATGGGCCGCCATGAGAAAGAAGATGGTGGCTGTAGAAATGTTGGCTCTTCGGAAAAAAGAAGGAATGATAGCGATGAGGAAGAAGATGAGAAGATGGATGTGCTGTGGGAAGACTTCAATGAAGAATTGCTCAAGAATTTGAGTTCCAGATATGGGTCTGGAAGGTTGCCGGAACTGGAATACTCGGAGTCGAAGGAAGCAAAGAAAGACGGCGGAGGGCGCGGCGGCAGTAGTGGGGCACTGCTGTCGGCGAGGATGGCGGGTGTGGTAGTGATGATGAAGGTGCTGAAGAAGATTCTGTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACGTCGTGA

Protein sequence

MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSSEKRRNDSDEEEDEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKARTS

Homology

[Close]

BLAST of Csor.00g267890 vs. NCBI nr
Match: XP_022939117.1 (uncharacterized protein LOC111445118 [Cucurbita moschata] >KAG6578325.1 hypothetical protein SDJN03_22773, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015903.1 hypothetical protein SDJN02_21006, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287 bits (735), Expect = 1.03e-97
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSSEKRRNDSDEEE 60
           MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSSEKRRNDSDEEE
Sbjct: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSSEKRRNDSDEEE 60

Query: 61  DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG 120
           DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG
Sbjct: 61  DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG 120

Query: 121 VVVMMKVLKKILFLHSFRRKLKARTS 146
           VVVMMKVLKKILFLHSFRRKLKARTS
Sbjct: 121 VVVMMKVLKKILFLHSFRRKLKARTS 146

[Close]

BLAST of Csor.00g267890 vs. NCBI nr
Match: XP_022993375.1 (uncharacterized protein LOC111489418 [Cucurbita maxima])

HSP 1 Score: 271 bits (694), Expect = 1.78e-91
Identity = 141/146 (96.58%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSSEKRRNDSDEEE 60
           MEAPEDFSFQPING +TPI GSPPLWGLPQKPM  HEKEDGGCRNVGSSEKRRNDSDEEE
Sbjct: 1   MEAPEDFSFQPING-STPIAGSPPLWGLPQKPMDLHEKEDGGCRNVGSSEKRRNDSDEEE 60

Query: 61  DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG 120
           DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG
Sbjct: 61  DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG 120

Query: 121 VVVMMKVLKKILFLHSFRRKLKARTS 146
           VVVMMKVLKKILFLHSFRRKLKARTS
Sbjct: 121 VVVMMKVLKKILFLHSFRRKLKARTS 145

[Close]

BLAST of Csor.00g267890 vs. NCBI nr
Match: XP_011650206.1 (uncharacterized protein LOC105434762 [Cucumis sativus] >KGN63099.1 hypothetical protein Csa_022432 [Cucumis sativus])

HSP 1 Score: 165 bits (418), Expect = 3.24e-49
Identity = 103/167 (61.68%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVG-SSEKRRN----- 60
           MEA E+FSFQPINGG+TPIT SPPL     + +  HEKED    NV  SSE R N     
Sbjct: 1   MEAQENFSFQPINGGSTPITESPPL---ASESIDHHEKEDQSDGNVDCSSEIRSNGCHRK 60

Query: 61  ----------------DSDEEEDEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKE 120
                           +SD+EEDEKMD+LWEDFNEELLKNLSSR+GS RLPEL+  ES+E
Sbjct: 61  SNSCSGDSRRTNEIAINSDDEEDEKMDMLWEDFNEELLKNLSSRFGSRRLPELDDLESEE 120

Query: 121 AKKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 145
           A +DG     SSGA+LSARMA VVV+MKVLKK+LFLH+FRRKLKART
Sbjct: 121 AMEDGS----SSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKART 160

[Close]

BLAST of Csor.00g267890 vs. NCBI nr
Match: XP_008441623.1 (PREDICTED: uncharacterized protein LOC103485703 [Cucumis melo] >KAA0037012.1 uncharacterized protein E6C27_scaffold86G00980 [Cucumis melo var. makuwa] >TYK06638.1 uncharacterized protein E5676_scaffold453G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 164 bits (415), Expect = 9.25e-49
Identity = 101/167 (60.48%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKED---------------GGCRN 60
           MEA E+F FQPING +TPIT SPPL     K +  HEKED               GG R 
Sbjct: 1   MEAQENFGFQPINGSSTPITESPPL---ASKSIDHHEKEDQSDGNIDCSSEIRSNGGHRK 60

Query: 61  VGS---SEKRRN----DSDEEEDEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKE 120
           + S     +R N    DSD+EEDEKMD+LWEDFNEEL+KNLSSR+GS RLPEL+  ES+E
Sbjct: 61  INSCSGDSRRTNEIAIDSDDEEDEKMDMLWEDFNEELMKNLSSRFGSRRLPELDDLESEE 120

Query: 121 AKKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 145
           A +DG     SSGA+LSARMA VVV+MKVLKK+LFLH+FRRKLKART
Sbjct: 121 AMEDGS----SSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKART 160

[Close]

BLAST of Csor.00g267890 vs. NCBI nr
Match: XP_022152473.1 (uncharacterized protein LOC111020194 [Momordica charantia])

HSP 1 Score: 146 bits (369), Expect = 7.41e-42
Identity = 92/165 (55.76%), Postives = 105/165 (63.64%), Query Frame = 0


Query: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMG-------------RHEKEDGGCRNVG 60
           M A E FSF   +G ++PIT SPPLW L   P                 ++  GG R V 
Sbjct: 1   MAAREGFSFPSFHGSSSPITESPPLWCLSSSPKSIDHHGYGNIDCSEAEKRSYGGHRKVN 60

Query: 61  S-------SEKRRNDSDEEEDEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAK 120
           S       + +R  DSDEEEDEKMDVLWEDFNEELL NLSSR+GSGR+PELEY +S+E K
Sbjct: 61  SCNLDVRRARERVIDSDEEEDEKMDVLWEDFNEELLNNLSSRFGSGRVPELEYLKSEEPK 120

Query: 121 KDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 145
                      ALLSARMA VVV+MKVLKK+LFLHSFRRK KART
Sbjct: 121 -----------ALLSARMASVVVIMKVLKKLLFLHSFRRKPKART 154

[Close]

BLAST of Csor.00g267890 vs. ExPASy TrEMBL
Match: A0A6J1FFX5 (uncharacterized protein LOC111445118 OS=Cucurbita moschata OX=3662 GN=LOC111445118 PE=4 SV=1)

HSP 1 Score: 287 bits (735), Expect = 4.99e-98
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSSEKRRNDSDEEE 60
           MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSSEKRRNDSDEEE
Sbjct: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSSEKRRNDSDEEE 60

Query: 61  DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG 120
           DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG
Sbjct: 61  DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG 120

Query: 121 VVVMMKVLKKILFLHSFRRKLKARTS 146
           VVVMMKVLKKILFLHSFRRKLKARTS
Sbjct: 121 VVVMMKVLKKILFLHSFRRKLKARTS 146

[Close]

BLAST of Csor.00g267890 vs. ExPASy TrEMBL
Match: A0A6J1JYC8 (uncharacterized protein LOC111489418 OS=Cucurbita maxima OX=3661 GN=LOC111489418 PE=4 SV=1)

HSP 1 Score: 271 bits (694), Expect = 8.64e-92
Identity = 141/146 (96.58%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSSEKRRNDSDEEE 60
           MEAPEDFSFQPING +TPI GSPPLWGLPQKPM  HEKEDGGCRNVGSSEKRRNDSDEEE
Sbjct: 1   MEAPEDFSFQPING-STPIAGSPPLWGLPQKPMDLHEKEDGGCRNVGSSEKRRNDSDEEE 60

Query: 61  DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG 120
           DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG
Sbjct: 61  DEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKEAKKDGGGRGGSSGALLSARMAG 120

Query: 121 VVVMMKVLKKILFLHSFRRKLKARTS 146
           VVVMMKVLKKILFLHSFRRKLKARTS
Sbjct: 121 VVVMMKVLKKILFLHSFRRKLKARTS 145

[Close]

BLAST of Csor.00g267890 vs. ExPASy TrEMBL
Match: A0A0A0LQ09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402070 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 1.57e-49
Identity = 103/167 (61.68%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVG-SSEKRRN----- 60
           MEA E+FSFQPINGG+TPIT SPPL     + +  HEKED    NV  SSE R N     
Sbjct: 1   MEAQENFSFQPINGGSTPITESPPL---ASESIDHHEKEDQSDGNVDCSSEIRSNGCHRK 60

Query: 61  ----------------DSDEEEDEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKE 120
                           +SD+EEDEKMD+LWEDFNEELLKNLSSR+GS RLPEL+  ES+E
Sbjct: 61  SNSCSGDSRRTNEIAINSDDEEDEKMDMLWEDFNEELLKNLSSRFGSRRLPELDDLESEE 120

Query: 121 AKKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 145
           A +DG     SSGA+LSARMA VVV+MKVLKK+LFLH+FRRKLKART
Sbjct: 121 AMEDGS----SSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKART 160

[Close]

BLAST of Csor.00g267890 vs. ExPASy TrEMBL
Match: A0A5D3C651 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001160 PE=4 SV=1)

HSP 1 Score: 164 bits (415), Expect = 4.48e-49
Identity = 101/167 (60.48%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKED---------------GGCRN 60
           MEA E+F FQPING +TPIT SPPL     K +  HEKED               GG R 
Sbjct: 1   MEAQENFGFQPINGSSTPITESPPL---ASKSIDHHEKEDQSDGNIDCSSEIRSNGGHRK 60

Query: 61  VGS---SEKRRN----DSDEEEDEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKE 120
           + S     +R N    DSD+EEDEKMD+LWEDFNEEL+KNLSSR+GS RLPEL+  ES+E
Sbjct: 61  INSCSGDSRRTNEIAIDSDDEEDEKMDMLWEDFNEELMKNLSSRFGSRRLPELDDLESEE 120

Query: 121 AKKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 145
           A +DG     SSGA+LSARMA VVV+MKVLKK+LFLH+FRRKLKART
Sbjct: 121 AMEDGS----SSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKART 160

[Close]

BLAST of Csor.00g267890 vs. ExPASy TrEMBL
Match: A0A1S3B3U6 (uncharacterized protein LOC103485703 OS=Cucumis melo OX=3656 GN=LOC103485703 PE=4 SV=1)

HSP 1 Score: 164 bits (415), Expect = 4.48e-49
Identity = 101/167 (60.48%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKED---------------GGCRN 60
           MEA E+F FQPING +TPIT SPPL     K +  HEKED               GG R 
Sbjct: 1   MEAQENFGFQPINGSSTPITESPPL---ASKSIDHHEKEDQSDGNIDCSSEIRSNGGHRK 60

Query: 61  VGS---SEKRRN----DSDEEEDEKMDVLWEDFNEELLKNLSSRYGSGRLPELEYSESKE 120
           + S     +R N    DSD+EEDEKMD+LWEDFNEEL+KNLSSR+GS RLPEL+  ES+E
Sbjct: 61  INSCSGDSRRTNEIAIDSDDEEDEKMDMLWEDFNEELMKNLSSRFGSRRLPELDDLESEE 120

Query: 121 AKKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 145
           A +DG     SSGA+LSARMA VVV+MKVLKK+LFLH+FRRKLKART
Sbjct: 121 AMEDGS----SSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKART 160

The following BLAST results are available for this feature:

BLAST of Csor.00g267890 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g267890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939117.1	1.03e-97	100.00	uncharacterized protein LOC111445118 [Cucurbita moschata] >KAG6578325.1 hypothet...	[more]
XP_022993375.1	1.78e-91	96.58	uncharacterized protein LOC111489418 [Cucurbita maxima]	[more]
XP_011650206.1	3.24e-49	61.68	uncharacterized protein LOC105434762 [Cucumis sativus] >KGN63099.1 hypothetical ...	[more]
XP_008441623.1	9.25e-49	60.48	PREDICTED: uncharacterized protein LOC103485703 [Cucumis melo] >KAA0037012.1 unc...	[more]
XP_022152473.1	7.41e-42	55.76	uncharacterized protein LOC111020194 [Momordica charantia]	[more]

BLAST of Csor.00g267890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFX5	4.99e-98	100.00	uncharacterized protein LOC111445118 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1JYC8	8.64e-92	96.58	uncharacterized protein LOC111489418 OS=Cucurbita maxima OX=3661 GN=LOC111489418...	[more]
A0A0A0LQ09	1.57e-49	61.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402070 PE=4 SV=1	[more]
A0A5D3C651	4.48e-49	60.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B3U6	4.48e-49	60.48	uncharacterized protein LOC103485703 OS=Cucumis melo OX=3656 GN=LOC103485703 PE=...	[more]

BLAST of Csor.00g267890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..59
None	No IPR available	PANTHER	PTHR34666:SF7	SUBFAMILY NOT NAMED	coord: 3..145
None	No IPR available	PANTHER	PTHR34666	EXPRESSED PROTEIN	coord: 3..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g267890.m01	Csor.00g267890.m01	mRNA