Csor.00g267540 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g267540
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionpentatricopeptide repeat-containing protein At4g38150-like
LocationCsor_Chr11: 8876825 .. 8883364 (+)
RNA-Seq ExpressionCsor.00g267540
SyntenyCsor.00g267540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCGCCCCGGATCCGCAGGAATCGAGACAAAGACAGACGTCGCACTACCGCCAGCGAACCCTCCTTACCTTTGTCGTGCGTGCGAGCGTGACCCCGCCTGGGTAACGCATCCTCATCTCGCAGGGATGAGTAAACGCAAGCGTGTCGCGGTACCAGTTGGTAGATCGAGAGCTTAGGCTATAGGGAACAATAATAGCAGTACCACAACACCAGATGAACTAAAAATGAATCATATAAAACATTTTACACACATCTCAATGCAAAGAGCTATGTCCAGCCACACAAGTGCAACAGAATGCAACATTGTCTTTTTAAGTGTCAATTTATCGATCTTGTCTTTTTTTTTTTTTTTTTCTCGTTCAAAAAAAGGAAAAAAGAAATTCACCATTGGTTATCAAGCTCTTTATTGAACTTCAACTTTATTCCGTAGTCCTAGATCTAAGAACATTCTTGCAGAAAAAAGTTTCAGTGGCCTTTCATGATTTTCATCTCTGGGTTCTTTAGAGTAGAGAATATGATATTGTCATGCCATGCTTTTGTGTTCAAGTATTCGTCAATTGTGATTTTTGTGTGATGCACTCTACTCATAATATATTCACAAGGTAATTTACTTGCTCCCGTTTATTATGCAGCCACCTCCACCTGTCAATGACACAAACCCGTACAATGTTTTTAGGCCAAGGGAGAAAGCTCACAGACTTCATACAAGAAGGGTACGAAGATTTTTGCTTCCATTACTCCCATTCTCAATTACTGAAGGATGTTTGTAGTTGAAGTTTTCCACTATGCACTTTATATTCTTATATTATCCTTCTCATTCGTGATATTTTAAATAGATGCAACGGAGGGAAAACAATGTGCAATCTTTTGAAAAGCTTCGCCAGGTCATTACTACTGTCATCAATTTCAATTTTTTTTACTTCCATGTGTTTAACTGTTGGTTTTCATGCTGTCTCTTTCCTTTATTTGCTGCCGTTGGTATGTTATTCTTATTTTTATAACCAAGTACATTCTCTCGTGTACTTTAGCCTATTATTCTATGCATATGTCCTTTCATTGTTTGATTGTTTATAAGACATTTTTTTTTATTAATTACTCTATAGGTAAGTTCATGGTTGCATACATTATAGGATTATTTTAATTTCACTTTTACATTCAGCCCAAGCTGCCGTTGGAAATGACTTTGTGTGTGCTCGCACTGGATGCATCTGTTAAATGAGTATTTTTGTATATTTATACAGTGCTTACAATCCTAACCTAGAAGCTAAAAGGCAATGGTAAAAGGAATAAGGAAAGCAAAAATCTGATCTGCACGATAAGTATTTTTGAATTATTATATGTCCAATAGCCAAATTTTGGATCAAAATAATTGGGTGAGCTTCGTTAGTAAGTTGGTAATGTTTACTTCCAGTAATTCCTCCTTAAAGTTGGGACATCGATATAGGTAGTTGCATATCTATAGGGCTATTGTGAAAAGAGCTAATGCTCAAAGATACAATTTCCATAAGGGAGTGAAAATGAGAAAGTGGTAAATGAAAGCAGTAAAAACAGAAACAATCAATTAGACTAAATTACGAAAGATGCATAAAGGCACTCCAATGAGACAAATATCTTGTAATGAAAAATCCAAGCAAAATATTTTGGAAGAAAATACAAGAGGAAGTCTTTTCAAAATTTTCAAGCAAGAGAGTTGCTCGCTAGAAGATTCTTTGATCTGTTTCCATATAAAATTATGATAGAATAGCTTTAGGGTAACGGTTAAATCACTTTTGTCATGTTCAAAATTACTTTGAAACATGTCTTTGACCATTCAAAACGAACTTTACTTTTGAATATACACTTTAAATGCAATTTTCATGCCATAAAAATTGTTTTGAATAATTAAAAGCATGCTTTGGAGTACAAAAAAAAGCAAGGTAACCATTTCAAAACCACTTCTAAACATAGTTAAAACCACTTCTAAACATAGTTAAAACCACTTCTAAACATAGTTAAAACCACTTCTAAACATAGCCTTAACCGCATTATCTCATATGAGATTGGCCTTAGGATCAAAAGAGAGAACCAATAAGTAATTGCAGAACATTGTCCTCAAGAATGTTTGAGAAAACCCACTAGATATTGGATAAAGGGAGCAACTTGAGCCAACTAGATCGAGAGTAGGGGGAGTAAAAAATGATATGGTTGGACAACATTGATCATAATCAATATTACTTCTCTGGGCATATAGACTTCCATAGAGCTGCAAAAGTTCCTTTTTCCAAGGGGATCAAAGAAGCTAAATGATGAGGTAACGATTTTAAGAGAAAATACTAGAGGAGTCAAGTGACCATCTGCGAGAGTCTTCATTAGAATCAATCTTTAGAAAAGAAAGGCTACCCAAAAGCGATCGTAAATCAATAATTTCTGCTTTCTTTATTAATCTTCGAAATTTAAGGTTCCAAGGAAGAATTGATTTATCCCAATAGCTGAAACCAAGCCATTTGGAGAACAAGAAATCGCGAACAACCAAGGACATGGTTGCAAAACATGGATTAAATTTAATTTAATGCACGCGTGCGCATACTAGAGAACATCTTTTTATTGATGATGCAAAAGTTACCAGTGTTGTTCTTAAAGAAAGATAACATGCTAATGACATCCTCATAAAACTACTCTCTTGATAGATTTGTGCTACTTGTAAGGGTTTTTGCAACCACCTTTAATGAAATCCTTTTTCTTCAAAAAAAAAAATTATAAAAGAAAACTGAAGACTGAAGTAAATTATAACAAGGCCTCCCATCTACGGAGGATTATATTCTTGGAATAGTTGCAAGAGAGTTTAAAACAGAGCACACGAAGTAGAAACATGAAATTTGGCAGTATCCACGGTTTTGTGCAAAAGTTGAAAATTTTCATTGAAAATCTTTGGTTTCTTTCAAATCAAAGTTCCTGAAGAAGAGGTTTAATGGTATTGACCACAATTGATTTACTTGAGATTTTGTTACATTGTGCTTAGTCAATTAATTTATAGCTTGTTAATCAGTTGAGGCATGCTTTGATAGCTGGGTCGATAATATATCCTTTTAGGCTGTTTTAGTGTAAAACTTCTTCCCATTTTCCTCATAGCTACAGTTTATCCTCTCTTTTGGCCAATTGGAGGACTTTTTATAAACCTCCTTCGGCTCAGGGTTTCCACCTCTTTTGTGTATATTTCCTCTCATCATCGAAATACTAGAATGTTTCACATAAAAAAATTAAAATTAAGAAGTATTTAGTTTTGGCGGGCTGTTGGTTAGTTTGCTTTGTTAGTTGAATGGTTAGTTACCAGAATATGCCAGAATATGGTTTTTTGTCTTTATAATCGCTAGCTTTTGGAATATTCAAGACAGACTTTGAATAATCTTGGACGAATGAAAACTAGGCTGCCTCATTGTTGAATATGTTCTCACTTGTCTACTTGTAATAATAATAAAAAGAAGATAATTAAATTGAAGGCAGAGGCAATAGTTTAGTACAAGGAGTGTATGTAATATACAGTAACATAGGAATGTAGTACTGTGGAAAGAAATCATGTTGATTTACTAATTTATGTGAATGAAAACAATTTATTTCAGATTTGAATGTTCATCACAAAATTATTGGATGATTATTGTTCTTACTCGCGTCACTGACGTTCTTATGGTTTGATAGATTGAATAGGCTGTGAGCTCAAAATTGTATTTGTTTTGCTGTTTCTTTTGAATATTATTCGATCTCGTTAATGATCTCAGATGTCCTCTTCTTTTAATATAGATTGCATTGTCTAAATTTTATCATTTTATGTTTGGGATTGTAAAATTTCAGGTTAGGCGCAACCTGGAACAAGCTAAAACCTTACTGGAGGCTTTAATTAAGGTGATTACTCATTGTACTCATGTGTTATTATACGTGCGTTTGCATTTGTCTTGAAGTAGTTATATGACATTGAAACACTGGATTGGCTCAAGACGTGATCTTTTTACAGAGAGAAGAGAAAAAAAGAGATCTGATGGAAAGTGAAGTCAGCCTCCAGAGGGTTCACTTGAAGTATAAGGTGCGTGTGTATTATGTGTTTTATTTTTATATAGTTCTCATATACCCGGGATAATTGGTTTGATCTTACTCTAGTGATCTCTATCTACTTAATCTTTTCTTACAATATTGGTGCATGGTTTCTCATCGGATCTCAGCATGAAACTGAACTTCTGGAAGAGAGCTTAGCACTTCCTAGGTTCTTACCCTTCTCTTGTAAGTTTGGTTCAAGCGAGGATGAATTTGTGGAGTTGGACGATATCGCAACCAGTCGCCCCCCACGAATACGAATTTCTGGATCTTTTAGGGAGACAAACATGATTGTGCTCCCAACTGAAAGCATGAAGCAAGAGAATAGGCAACAACTGCCACATGGATGGCTTCACAAAATGGTACCTTAGTCGTTTATAACCTTACTTAGCATCCTTTTGTTACAATAGCAGCAGATACTACAAGTTTCCTAGCGATCCTGCCGAGCAGTTTAACATATTGAGAACTGACTTGCATTTAAACTCAATAGTTTTTCTTGTTAGAACACTAATCGTGTATATTCTCGACTGTTCAACGGGATTGTCGATTTGTGCAGGATCCTCTGGAGCCAGTGTTGTTGTTTGCAAAACCTCTGGTTGCAGAGAAGTTGGCTGCTGCTAATATAGTGCCACCATCAGCAGAATCTCCGACAAGGAACAGTGTGTCAATGGGATCTCATAAACTTCGAGGTAGGATCGGGCGAGGTGGCAGGATAATATTTGACAGATGGAATCCATTGATGCAGACTGGTATTGACTGTAGTAGTAACTCATATTATTCACCACAAAGCAATCACATTTAGCATATAATTGATTGATTTGAGTGAGGATCAGCATGATCTCTGTATAACAGCTCCTAGATTCTTTTGCTGCATAAACAAAGGAGTTAGGTTAGCATCAAAACGAACCTTCCTTTTTCCGACTTAAGAATTCATGCAAAAGCAAGCTTTGTCTGCAATTTGCATGCATCATCTGAAATTGCTGCCCAATTTCTTATTCATATGTTTGTAAGTACTGTGTTTAAATATCTCAACTTTTTGTTTCATTTAGTTTGTCAACTATGTTGTGGTTTGACATTTAGATTGCTCGGCTTGTATAAGTTCTATCGATGTTCCCAAGTGTACGTGAAATTTAAGATGTTCTTAAAAAGATGTATGAAGATTTAAATTATGTATTTACCATTAGAAAGACAATGAGTGTTGAGGCCATGGCTTGAAACTAGGGGGAAGATGAAGCAACTTGAAATAGTTTAATTGTGCGATTATAAAAAAAGGAGTTAGTTACTAAGGAATTTCTTTTGCTCTTTTGTAATGGGAAACAGCTTTTTTTTTAATGTGGGTGTTTGTGAGGCTAATGGATGAAATTGATTGTAGATAGGATGTGATTGAAGTTATTTAAAAAAAAAAAAAAAGAAAAAAATTTTAGTTCTAAACTTCTTAAGAACTCATAGGAAGAGTTGCAACGAACTCCGCAGAACAGCATCCATCTGCCGCCGGCGAAACTCCAACCCCATTTTCCGAGAGGGAGATTAACGCGCAATTCCCGAAGGCTATGGCGAACAGGGTAACTCGAGCCCTTCTTGTTGCCTGCACCACCATCGCTTCATCTCCTTCATCCTTCTTCCCCAACCCATCGTTTCTAAATCATCATTTTCGTTGTGGTACACTCCTTCCCACTTCCAAACCACCGGCCATTTTCTATATCAACGCCTGTAACAACAGATTGTTCGCCTACTCCTCATCTTCAGAAGCTAACAAGATCAATACCAAAGTCAATTTCTCAATCTCACACTCCGATGAAGACGAAGAAGACGATTTTCGTGTTGGGTCCGTGGAAGAAGAAGTGGGCAAAAGCAAAAATCTCCCACCGCCGTATGACCCCTTCAGCAAGAAGCCGGTTGTGGAAGAGGCGGAAGACCCAAAGAATTTGCAGGAAATCTTCCATAAGATGAGGACAGATGGTTTTTTAAACAATGCCGTCAAGATGTTCGACGAATTGTCTAAGGATGGTCTCACCCACGAGGCTCTGCAGCTCTTCTCTCAAATTAAGGACAAAGGTCACATGCCTGATGTTGTCGCCCACACAGCCGTCATAGAGGCCTATGTGAATGCGGGTCAGAGCAAGGAAGCTCACAAGGTGTACCTGCGAATGCTTGCCTCTGGAGTGACCCCAAATGCCTATACTTACACTGTTCTCATCAAAGGACTTGCTGCGGATCCCAAGTTCGTGGGGGATGCGAAGAAGTTCTTGCTGGAAATGATGGGCAGGGGATTGCGACCCAATGCTGGGACCTATACTGCCGTCTTTGAGGCCCTTGTAAGGGACACCAAAGTGGAAGAAGCAAGAGAGTTGTTGGTGCAAATGGAGGCTAAGGGGTTTGTGCCCAATGAGAAGGATGTGAAGGAGATTCTCCACACCAAAAGGGGAAGGGGACCCTTATTTAGGACCCTCATCAACATTCTCTTCAACAAGTAG

mRNA sequence

ATGGTGCGCCCCGGATCCGCAGGAATCGAGACAAAGACAGACGTCGCACTACCGCCAGCGAACCCTCCTTACCTTTGTCGTGCGTGCGAGCGTGACCCCGCCTGGGTAACGCATCCTCATCTCGCAGGGATGAGTAAACGCAAGCGTGTCGCGGTTAGGCGCAACCTGGAACAAGCTAAAACCTTACTGGAGGCTTTAATTAAGAGAGAAGAGAAAAAAAGAGATCTGATGGAAAGTGAAGTCAGCCTCCAGAGGGTTCACTTGAAGTATAAGCATGAAACTGAACTTCTGGAAGAGAGCTTAGCACTTCCTAGGTTCTTACCCTTCTCTTGTAAGTTTGGTTCAAGCGAGGATGAATTTGTGGAGTTGGACGATATCGCAACCAGTCGCCCCCCACGAATACGAATTTCTGGATCTTTTAGGGAGACAAACATGATTGTGCTCCCAACTGAAAGCATGAAGCAAGAGAATAGGCAACAACTGCCACATGGATGGCTTCACAAAATGGATCCTCTGGAGCCAGTGTTGTTGTTTGCAAAACCTCTGGTTGCAGAGAAGTTGGCTGCTGCTAATATAGTGCCACCATCAGCAGAATCTCCGACAAGGAACAGTGTGTCAATGGGATCTCATAAACTTCGAGGTAGGATCGGGCGAGGTGGCAGGATAATATTTGACAGATGGAATCCATTGATGCAGACTGGAAGAGTTGCAACGAACTCCGCAGAACAGCATCCATCTGCCGCCGGCGAAACTCCAACCCCATTTTCCGAGAGGGAGATTAACGCGCAATTCCCGAAGGCTATGGCGAACAGGGTAACTCGAGCCCTTCTTGTTGCCTGCACCACCATCGCTTCATCTCCTTCATCCTTCTTCCCCAACCCATCGTTTCTAAATCATCATTTTCGTTGTGGTACACTCCTTCCCACTTCCAAACCACCGGCCATTTTCTATATCAACGCCTGTAACAACAGATTGTTCGCCTACTCCTCATCTTCAGAAGCTAACAAGATCAATACCAAAGTCAATTTCTCAATCTCACACTCCGATGAAGACGAAGAAGACGATTTTCGTGTTGGGTCCGTGGAAGAAGAAGTGGGCAAAAGCAAAAATCTCCCACCGCCGTATGACCCCTTCAGCAAGAAGCCGGTTGTGGAAGAGGCGGAAGACCCAAAGAATTTGCAGGAAATCTTCCATAAGATGAGGACAGATGGTTTTTTAAACAATGCCGTCAAGATGTTCGACGAATTGTCTAAGGATGGTCTCACCCACGAGGCTCTGCAGCTCTTCTCTCAAATTAAGGACAAAGGTCACATGCCTGATGTTGTCGCCCACACAGCCGTCATAGAGGCCTATGTGAATGCGGGTCAGAGCAAGGAAGCTCACAAGGTGTACCTGCGAATGCTTGCCTCTGGAGTGACCCCAAATGCCTATACTTACACTGTTCTCATCAAAGGACTTGCTGCGGATCCCAAGTTCGTGGGGGATGCGAAGAAGTTCTTGCTGGAAATGATGGGCAGGGGATTGCGACCCAATGCTGGGACCTATACTGCCGTCTTTGAGGCCCTTGTAAGGGACACCAAAGTGGAAGAAGCAAGAGAGTTGTTGGTGCAAATGGAGGCTAAGGGGTTTGTGCCCAATGAGAAGGATGTGAAGGAGATTCTCCACACCAAAAGGGGAAGGGGACCCTTATTTAGGACCCTCATCAACATTCTCTTCAACAAGTAG

Coding sequence (CDS)

ATGGTGCGCCCCGGATCCGCAGGAATCGAGACAAAGACAGACGTCGCACTACCGCCAGCGAACCCTCCTTACCTTTGTCGTGCGTGCGAGCGTGACCCCGCCTGGGTAACGCATCCTCATCTCGCAGGGATGAGTAAACGCAAGCGTGTCGCGGTTAGGCGCAACCTGGAACAAGCTAAAACCTTACTGGAGGCTTTAATTAAGAGAGAAGAGAAAAAAAGAGATCTGATGGAAAGTGAAGTCAGCCTCCAGAGGGTTCACTTGAAGTATAAGCATGAAACTGAACTTCTGGAAGAGAGCTTAGCACTTCCTAGGTTCTTACCCTTCTCTTGTAAGTTTGGTTCAAGCGAGGATGAATTTGTGGAGTTGGACGATATCGCAACCAGTCGCCCCCCACGAATACGAATTTCTGGATCTTTTAGGGAGACAAACATGATTGTGCTCCCAACTGAAAGCATGAAGCAAGAGAATAGGCAACAACTGCCACATGGATGGCTTCACAAAATGGATCCTCTGGAGCCAGTGTTGTTGTTTGCAAAACCTCTGGTTGCAGAGAAGTTGGCTGCTGCTAATATAGTGCCACCATCAGCAGAATCTCCGACAAGGAACAGTGTGTCAATGGGATCTCATAAACTTCGAGGTAGGATCGGGCGAGGTGGCAGGATAATATTTGACAGATGGAATCCATTGATGCAGACTGGAAGAGTTGCAACGAACTCCGCAGAACAGCATCCATCTGCCGCCGGCGAAACTCCAACCCCATTTTCCGAGAGGGAGATTAACGCGCAATTCCCGAAGGCTATGGCGAACAGGGTAACTCGAGCCCTTCTTGTTGCCTGCACCACCATCGCTTCATCTCCTTCATCCTTCTTCCCCAACCCATCGTTTCTAAATCATCATTTTCGTTGTGGTACACTCCTTCCCACTTCCAAACCACCGGCCATTTTCTATATCAACGCCTGTAACAACAGATTGTTCGCCTACTCCTCATCTTCAGAAGCTAACAAGATCAATACCAAAGTCAATTTCTCAATCTCACACTCCGATGAAGACGAAGAAGACGATTTTCGTGTTGGGTCCGTGGAAGAAGAAGTGGGCAAAAGCAAAAATCTCCCACCGCCGTATGACCCCTTCAGCAAGAAGCCGGTTGTGGAAGAGGCGGAAGACCCAAAGAATTTGCAGGAAATCTTCCATAAGATGAGGACAGATGGTTTTTTAAACAATGCCGTCAAGATGTTCGACGAATTGTCTAAGGATGGTCTCACCCACGAGGCTCTGCAGCTCTTCTCTCAAATTAAGGACAAAGGTCACATGCCTGATGTTGTCGCCCACACAGCCGTCATAGAGGCCTATGTGAATGCGGGTCAGAGCAAGGAAGCTCACAAGGTGTACCTGCGAATGCTTGCCTCTGGAGTGACCCCAAATGCCTATACTTACACTGTTCTCATCAAAGGACTTGCTGCGGATCCCAAGTTCGTGGGGGATGCGAAGAAGTTCTTGCTGGAAATGATGGGCAGGGGATTGCGACCCAATGCTGGGACCTATACTGCCGTCTTTGAGGCCCTTGTAAGGGACACCAAAGTGGAAGAAGCAAGAGAGTTGTTGGTGCAAATGGAGGCTAAGGGGTTTGTGCCCAATGAGAAGGATGTGAAGGAGATTCTCCACACCAAAAGGGGAAGGGGACCCTTATTTAGGACCCTCATCAACATTCTCTTCAACAAGTAG

Protein sequence

MVRPGSAGIETKTDVALPPANPPYLCRACERDPAWVTHPHLAGMSKRKRVAVRRNLEQAKTLLEALIKREEKKRDLMESEVSLQRVHLKYKHETELLEESLALPRFLPFSCKFGSSEDEFVELDDIATSRPPRIRISGSFRETNMIVLPTESMKQENRQQLPHGWLHKMDPLEPVLLFAKPLVAEKLAAANIVPPSAESPTRNSVSMGSHKLRGRIGRGGRIIFDRWNPLMQTGRVATNSAEQHPSAAGETPTPFSEREINAQFPKAMANRVTRALLVACTTIASSPSSFFPNPSFLNHHFRCGTLLPTSKPPAIFYINACNNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVEEEVGKSKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
Homology
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BLAST of Csor.00g267540 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.9e-27
Identity = 78/233 (33.48%), Postives = 128/233 (54.94%), Query Frame = 0 

Query: 322 NNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVEEEVGKSKNLPPPYDPFSKK 381
           N  L    SS+   +   +   ++  SD    DD  +   +  V +     P  + + ++
Sbjct: 51  NRPLRGERSSNSHREPPARQAHNLGKSDTTLSDDGFLEQFKLGVNQDSRETPKPEQYPQE 110

Query: 382 PVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQLFSQIKDKGHMPDV 441
           P+      P++  EIF KM+  G + NAV M D L KDGL  EA++LF  ++DKG +P+V
Sbjct: 111 PL----PPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEV 170

Query: 442 VAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLL 501
           V +TAV+EA+  A + ++A +++ +M  +G+ PNA++Y VL++GL  +   + DA  F  
Sbjct: 171 VIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL-YNCNMLDDAVAFCS 230

Query: 502 EMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNEKDVKEIL 555
           EM+  G  PN  T+  + +AL R   VE+A+  +  +  KGF  N K VKE +
Sbjct: 231 EMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 278

[Close]
BLAST of Csor.00g267540 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-15
Identity = 56/144 (38.89%), Postives = 74/144 (51.39%), Query Frame = 0 

Query: 403 DGFLNNAVKMFDELSKDGLTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHK 462
           DGF   A  +     +DGL  EA+  F  +K +GH P VV + A+++ +  AG   EA +
Sbjct: 244 DGF--TASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALR 303

Query: 463 VYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEAL 522
           V   M  +G  P+A TY  L  G  A   F  +A + L  M  +GL PNA TY  V  A 
Sbjct: 304 VLGEMEQNGCQPDAVTYNEL-AGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAY 363

Query: 523 VRDTKVEEARELLVQMEAKGFVPN 547
               KV+EA  L  QM+  GFVPN
Sbjct: 364 GNVGKVDEALALFDQMKKTGFVPN 384

[Close]
BLAST of Csor.00g267540 vs. ExPASy Swiss-Prot
Match: Q8S8P6 (Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana OX=3702 GN=At2g32630 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.4e-14
Identity = 51/150 (34.00%), Postives = 79/150 (52.67%), Query Frame = 0 

Query: 399 KMRTDGFLNNAVKMFDELSKDGLTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSK 458
           K+ T  + N    + D   K+G   EA +LF ++  KG  P+ + +  +I AY   G+ K
Sbjct: 466 KLSTVSYTN----LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 525

Query: 459 EAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAV 518
           EA K+   M A+G+ P++YTYT LI G       V +A +   EM  +GL  N+ TYT +
Sbjct: 526 EARKLRANMEANGMDPDSYTYTSLIHGECIADN-VDEAMRLFSEMGLKGLDQNSVTYTVM 585

Query: 519 FEALVRDTKVEEARELLVQMEAKGFVPNEK 549
              L +  K +EA  L  +M+ KG+  + K
Sbjct: 586 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610

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BLAST of Csor.00g267540 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.4e-14
Identity = 51/152 (33.55%), Postives = 75/152 (49.34%), Query Frame = 0 

Query: 412 MFDELSKDGLTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASG 471
           M D L K     EA  LF  ++ KG  P+VV +TA+I+ Y  AG+  EAH +  +ML+  
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562

Query: 472 VTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEA 531
             PN+ T+  LI GL AD K + +A     +M+  GL+P   T T +   L++D   + A
Sbjct: 563 CLPNSLTFNALIHGLCADGK-LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 622

Query: 532 RELLVQMEAKGFVPNEKDVKEILHTKRGRGPL 564
                QM + G  P+       + T    G L
Sbjct: 623 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653

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BLAST of Csor.00g267540 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.0e-14
Identity = 51/165 (30.91%), Postives = 84/165 (50.91%), Query Frame = 0 

Query: 412 MFDELSKDGLTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASG 471
           M   L KDG   +A+++ +Q+  KG  P ++ +  VI+    AG++ +A K+   M A  
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479

Query: 472 VTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEA 531
           + P+  TY+ L+ GL+ + K V +A KF  E    G+RPNA T+ ++   L +  + + A
Sbjct: 480 LKPDTITYSSLVGGLSREGK-VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 539

Query: 532 RELLVQMEAKGFVPNEKDVKEILH--TKRGRGPLFRTLINILFNK 575
            + LV M  +G  PNE     ++      G       L+N L NK
Sbjct: 540 IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583

[Close]
BLAST of Csor.00g267540 vs. NCBI nr
Match: KAG6588578.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1134 bits (2932), Expect = 0.0
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0 

Query: 1   MVRPGSAGIETKTDVALPPANPPYLCRACERDPAWVTHPHLAGMSKRKRVAVRRNLEQAK 60
           MVRPGSAGIETKTDVALPPANPPYLCRACERDPAWVTHPHLAGMSKRKRVAVRRNLEQAK
Sbjct: 1   MVRPGSAGIETKTDVALPPANPPYLCRACERDPAWVTHPHLAGMSKRKRVAVRRNLEQAK 60

Query: 61  TLLEALIKREEKKRDLMESEVSLQRVHLKYKHETELLEESLALPRFLPFSCKFGSSEDEF 120
           TLLEALIKREEKKRDLMESEVSLQRVHLKYKHETELLEESLALPRFLPFSCKFGSSEDEF
Sbjct: 61  TLLEALIKREEKKRDLMESEVSLQRVHLKYKHETELLEESLALPRFLPFSCKFGSSEDEF 120

Query: 121 VELDDIATSRPPRIRISGSFRETNMIVLPTESMKQENRQQLPHGWLHKMDPLEPVLLFAK 180
           VELDDIATSRPPRIRISGSFRETNMIVLPTESMKQENRQQLPHGWLHKMDPLEPVLLFAK
Sbjct: 121 VELDDIATSRPPRIRISGSFRETNMIVLPTESMKQENRQQLPHGWLHKMDPLEPVLLFAK 180

Query: 181 PLVAEKLAAANIVPPSAESPTRNSVSMGSHKLRGRIGRGGRIIFDRWNPLMQTGRVATNS 240
           PLVAEKLAAANIVPPSAESPTRNSVSMGSHKLRGRIGRGGRIIFDRWNPLMQTGRVATNS
Sbjct: 181 PLVAEKLAAANIVPPSAESPTRNSVSMGSHKLRGRIGRGGRIIFDRWNPLMQTGRVATNS 240

Query: 241 AEQHPSAAGETPTPFSEREINAQFPKAMANRVTRALLVACTTIASSPSSFFPNPSFLNHH 300
           AEQHPSAAGETPTPFSEREINAQFPKAMANRVTRALLVACTTIASSPSSFFPNPSFLNHH
Sbjct: 241 AEQHPSAAGETPTPFSEREINAQFPKAMANRVTRALLVACTTIASSPSSFFPNPSFLNHH 300

Query: 301 FRCGTLLPTSKPPAIFYINACNNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDFRVGS 360
           FRCGTLLPTSKPPAIFYINACNNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDFRVGS
Sbjct: 301 FRCGTLLPTSKPPAIFYINACNNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDFRVGS 360

Query: 361 VEEEVGKSKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDG 420
           VEEEVGKSKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDG
Sbjct: 361 VEEEVGKSKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDG 420

Query: 421 LTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYT 480
           LTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYT
Sbjct: 421 LTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYT 480

Query: 481 VLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEA 540
           VLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEA
Sbjct: 481 VLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEA 540

Query: 541 KGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK 574
           KGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
Sbjct: 541 KGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK 574

[Close]
BLAST of Csor.00g267540 vs. NCBI nr
Match: KAG6588516.1 (Protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 943 bits (2438), Expect = 0.0
Identity = 488/523 (93.31%), Postives = 499/523 (95.41%), Query Frame = 0 

Query: 52   VRRNLEQAKTLLEALIKREEKKRDLMESEVSLQRVHLKYKHETELLEESLALPRFLPFSC 111
            VRRNLEQAKTLLEALIKREEKKRDLMESEVSLQRVHLKYKHETELLEESLALPRFLPFSC
Sbjct: 888  VRRNLEQAKTLLEALIKREEKKRDLMESEVSLQRVHLKYKHETELLEESLALPRFLPFSC 947

Query: 112  KFGSSEDEFVELDDIATSRPPRIRISGSFRETNMIVLPTESMKQENRQQLPHGWLHKMDP 171
            KFGSSEDEFVELDDIATSRPPRIRISGSFRETNMIVLPTESMKQENRQQLPHGWLHKMDP
Sbjct: 948  KFGSSEDEFVELDDIATSRPPRIRISGSFRETNMIVLPTESMKQENRQQLPHGWLHKMDP 1007

Query: 172  LEPVLLFAKPLVAEKLAAANIVPPSAESPTRNSVSMGSHKLRGRIGRGGRIIFDRWNPLM 231
            LEPVLLFAKPLVAEKLAAANIVPPSAESPTRNSVSMGSHKLRGRIGRGGRIIFDRWNPLM
Sbjct: 1008 LEPVLLFAKPLVAEKLAAANIVPPSAESPTRNSVSMGSHKLRGRIGRGGRIIFDRWNPLM 1067

Query: 232  QTGRVATNSAEQHPSAAGETPTPFSEREINAQFPKAMANRVTRALLVACTTIASSPSSFF 291
            QT     +SAEQHPSAA    +P +ERE+NAQF KAMANR+TRAL+VACTTIASSPSSF 
Sbjct: 1068 QT----AHSAEQHPSAA----SPLTEREVNAQFVKAMANRITRALVVACTTIASSPSSFS 1127

Query: 292  PNPSFLNHHFRCGTLLPTSKPPAIFYINACNNRLFAYSSSSEANKINTKVNFSISHSDED 351
            PNPSFLNHHFRC       KPP IFYI ACNNRLFAYSSSSEANKINTKVNFSISHSDED
Sbjct: 1128 PNPSFLNHHFRC-------KPPTIFYIKACNNRLFAYSSSSEANKINTKVNFSISHSDED 1187

Query: 352  EEDDFRVGSVEEEVGKSKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVK 411
            EEDDFRVGSVEE VGK+KNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVK
Sbjct: 1188 EEDDFRVGSVEE-VGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVK 1247

Query: 412  MFDELSKDGLTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASG 471
            MFDE+SKDGLTHEALQLFS+IKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASG
Sbjct: 1248 MFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASG 1307

Query: 472  VTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEA 531
            VTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTA+FEALVRD KV+EA
Sbjct: 1308 VTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAIFEALVRDAKVDEA 1367

Query: 532  RELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK 574
            RELLVQMEAKGFVPNEKDVKEILHTKRGRGPL RTLINILFNK
Sbjct: 1368 RELLVQMEAKGFVPNEKDVKEILHTKRGRGPLCRTLINILFNK 1394

[Close]
BLAST of Csor.00g267540 vs. NCBI nr
Match: XP_022931685.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata])

HSP 1 Score: 600 bits (1548), Expect = 2.86e-211
Identity = 309/338 (91.42%), Postives = 318/338 (94.08%), Query Frame = 0 

Query: 237 ATNSAEQHPSAAGETPTPFSEREINAQFPKAMANRVTRALLVACTTIASSPSSFFPNPSF 296
           A +SAEQHPSAA    +P +ERE+NAQF KAMANR+TRALLVACTTIASSPSSF PNPSF
Sbjct: 18  AAHSAEQHPSAA----SPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSF 77

Query: 297 LNHHFRCGTLLPTSKPPAIFYINACNNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDF 356
           LNHHFRC       KPP IFYINACNNRLFAYSSSSEANKINTKVNFSI HSDEDEEDDF
Sbjct: 78  LNHHFRC-------KPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDF 137

Query: 357 RVGSVEEEVGKSKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEL 416
           RVGSVEE VGK+KNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDE+
Sbjct: 138 RVGSVEE-VGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEM 197

Query: 417 SKDGLTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNA 476
           SKDGLTHEALQLFS+IKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTP A
Sbjct: 198 SKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIA 257

Query: 477 YTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLV 536
           YTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRD KV+EARELLV
Sbjct: 258 YTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLV 317

Query: 537 QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK 574
           QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
Sbjct: 318 QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK 343

[Close]
BLAST of Csor.00g267540 vs. NCBI nr
Match: XP_022969848.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 561 bits (1446), Expect = 1.75e-196
Identity = 287/307 (93.49%), Postives = 293/307 (95.44%), Query Frame = 0 

Query: 268 MANRVTRALLVACTTIASSPSSFFPNPSFLNHHFRCGTLLPTSKPPAIFYINACNNRLFA 327
           MANR+TRALLVACTTIASSPSSF PNPSFLNHHFRC       KP  IFYINACNNRLFA
Sbjct: 1   MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRC-------KPLTIFYINACNNRLFA 60

Query: 328 YSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVEEEVGKSKNLPPPYDPFSKKPVVEEA 387
           YSSSSEANKINTKVNFSISHSDEDEEDDFRVGSV+E VGK+KNLPPPYDPFSKKPVVEEA
Sbjct: 61  YSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVKE-VGKTKNLPPPYDPFSKKPVVEEA 120

Query: 388 EDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQLFSQIKDKGHMPDVVAHTAV 447
           EDPKNLQEIFHKMRTDGFLNNA KMFDE+SKDGLTHEALQLFS+IKDKGHMPDVVAHTAV
Sbjct: 121 EDPKNLQEIFHKMRTDGFLNNAAKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAV 180

Query: 448 IEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRG 507
           IEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRG
Sbjct: 181 IEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRG 240

Query: 508 LRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTL 567
           LRPNAGTYTAVFEALVRD KV+EARELLVQMEAKGFV NEKDVKEILHTKRGRGPLFRTL
Sbjct: 241 LRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVANEKDVKEILHTKRGRGPLFRTL 299

Query: 568 INILFNK 574
           INILFNK
Sbjct: 301 INILFNK 299

[Close]
BLAST of Csor.00g267540 vs. NCBI nr
Match: XP_023530438.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556 bits (1432), Expect = 2.35e-194
Identity = 285/307 (92.83%), Postives = 292/307 (95.11%), Query Frame = 0 

Query: 268 MANRVTRALLVACTTIASSPSSFFPNPSFLNHHFRCGTLLPTSKPPAIFYINACNNRLFA 327
           MANR+TRALLVACTTIASSPSSF PNPSFLNHHFRC       +PP IFYINA NNRLFA
Sbjct: 1   MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRC-------RPPTIFYINAYNNRLFA 60

Query: 328 YSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVEEEVGKSKNLPPPYDPFSKKPVVEEA 387
           YSSSSEANKINTKVNFSISHSDEDEE+DFRVGSVEE VGK+KNLPPPYDPFSKKPVVEEA
Sbjct: 61  YSSSSEANKINTKVNFSISHSDEDEENDFRVGSVEE-VGKTKNLPPPYDPFSKKPVVEEA 120

Query: 388 EDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQLFSQIKDKGHMPDVVAHTAV 447
            DPKNLQEIFHKMRTDGFLNNAVKMFD +SKDGLTHEALQLFS+IKDKGHMPDVVAHTAV
Sbjct: 121 VDPKNLQEIFHKMRTDGFLNNAVKMFDGMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAV 180

Query: 448 IEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRG 507
           IEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRG
Sbjct: 181 IEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRG 240

Query: 508 LRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTL 567
           LRPNAGTYTAVFEALVRD KV+EAR LLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTL
Sbjct: 241 LRPNAGTYTAVFEALVRDAKVDEARGLLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTL 299

Query: 568 INILFNK 574
           INILFNK
Sbjct: 301 INILFNK 299

[Close]
BLAST of Csor.00g267540 vs. ExPASy TrEMBL
Match: A0A6J1F064 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata OX=3662 GN=LOC111437840 PE=4 SV=1)

HSP 1 Score: 600 bits (1548), Expect = 1.39e-211
Identity = 309/338 (91.42%), Postives = 318/338 (94.08%), Query Frame = 0 

Query: 237 ATNSAEQHPSAAGETPTPFSEREINAQFPKAMANRVTRALLVACTTIASSPSSFFPNPSF 296
           A +SAEQHPSAA    +P +ERE+NAQF KAMANR+TRALLVACTTIASSPSSF PNPSF
Sbjct: 18  AAHSAEQHPSAA----SPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSF 77

Query: 297 LNHHFRCGTLLPTSKPPAIFYINACNNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDF 356
           LNHHFRC       KPP IFYINACNNRLFAYSSSSEANKINTKVNFSI HSDEDEEDDF
Sbjct: 78  LNHHFRC-------KPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDF 137

Query: 357 RVGSVEEEVGKSKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEL 416
           RVGSVEE VGK+KNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDE+
Sbjct: 138 RVGSVEE-VGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEM 197

Query: 417 SKDGLTHEALQLFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNA 476
           SKDGLTHEALQLFS+IKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTP A
Sbjct: 198 SKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIA 257

Query: 477 YTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLV 536
           YTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRD KV+EARELLV
Sbjct: 258 YTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLV 317

Query: 537 QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK 574
           QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
Sbjct: 318 QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK 343

[Close]
BLAST of Csor.00g267540 vs. ExPASy TrEMBL
Match: A0A6J1I251 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468927 PE=4 SV=1)

HSP 1 Score: 561 bits (1446), Expect = 8.49e-197
Identity = 287/307 (93.49%), Postives = 293/307 (95.44%), Query Frame = 0 

Query: 268 MANRVTRALLVACTTIASSPSSFFPNPSFLNHHFRCGTLLPTSKPPAIFYINACNNRLFA 327
           MANR+TRALLVACTTIASSPSSF PNPSFLNHHFRC       KP  IFYINACNNRLFA
Sbjct: 1   MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRC-------KPLTIFYINACNNRLFA 60

Query: 328 YSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVEEEVGKSKNLPPPYDPFSKKPVVEEA 387
           YSSSSEANKINTKVNFSISHSDEDEEDDFRVGSV+E VGK+KNLPPPYDPFSKKPVVEEA
Sbjct: 61  YSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVKE-VGKTKNLPPPYDPFSKKPVVEEA 120

Query: 388 EDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQLFSQIKDKGHMPDVVAHTAV 447
           EDPKNLQEIFHKMRTDGFLNNA KMFDE+SKDGLTHEALQLFS+IKDKGHMPDVVAHTAV
Sbjct: 121 EDPKNLQEIFHKMRTDGFLNNAAKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAV 180

Query: 448 IEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRG 507
           IEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRG
Sbjct: 181 IEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRG 240

Query: 508 LRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTL 567
           LRPNAGTYTAVFEALVRD KV+EARELLVQMEAKGFV NEKDVKEILHTKRGRGPLFRTL
Sbjct: 241 LRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVANEKDVKEILHTKRGRGPLFRTL 299

Query: 568 INILFNK 574
           INILFNK
Sbjct: 301 INILFNK 299

[Close]
BLAST of Csor.00g267540 vs. ExPASy TrEMBL
Match: A0A6J1DUN8 (pentatricopeptide repeat-containing protein At4g38150-like OS=Momordica charantia OX=3673 GN=LOC111023255 PE=4 SV=1)

HSP 1 Score: 468 bits (1204), Expect = 7.76e-160
Identity = 255/319 (79.94%), Postives = 273/319 (85.58%), Query Frame = 0 

Query: 268 MANRVTRALLVACTTIASSPSSFFPNP------SFLNHHFRCGTLLPTSKP--PAIFYIN 327
           MAN V+RALLVA  TI SS  SFFPNP      SFLN +F  G L+PT KP  PAIF+IN
Sbjct: 1   MANMVSRALLVASNTITSSSISFFPNPLSLRASSFLNRYFGSGRLVPTRKPNPPAIFHIN 60

Query: 328 ACNNRLFAYSSSSEANKINTKVNFSISHSDEDEEDD----FRVGSVEEEVGKSKNLPPPY 387
           A N RL+A SSSSEANKINTKVNFSISHSDED++DD     +VG+VE  + KSK LPPPY
Sbjct: 61  AANTRLYA-SSSSEANKINTKVNFSISHSDEDDDDDDDHHHQVGAVE--LDKSK-LPPPY 120

Query: 388 DPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQLFSQIKDK 447
           DPFSKKPVVEE EDPKNLQEIFHKMRTDG  N+AVKMFD LSKDG THEALQLFS IK+K
Sbjct: 121 DPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQLFSIIKEK 180

Query: 448 GHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGD 507
           GHMPDVVAHTAVIEAYVNAGQ KEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGD
Sbjct: 181 GHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGD 240

Query: 508 AKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNEKDVKEILH 567
           AK  LLEMMGRGLRPNAGTYTAVFEAL R+++VEEARE + QMEAKGFV NEKDVKE+L+
Sbjct: 241 AKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAKGFVANEKDVKEVLN 300

Query: 568 TKRGRGPLFRTLINILFNK 574
            KR RGPLFRTLINILFNK
Sbjct: 301 AKRVRGPLFRTLINILFNK 315

[Close]
BLAST of Csor.00g267540 vs. ExPASy TrEMBL
Match: A0A6P3ZML7 (pentatricopeptide repeat-containing protein At4g38150-like OS=Ziziphus jujuba OX=326968 GN=LOC107411694 PE=4 SV=1)

HSP 1 Score: 363 bits (931), Expect = 2.12e-118
Identity = 187/267 (70.04%), Postives = 222/267 (83.15%), Query Frame = 0 

Query: 308 PTSKPPAIFYINACNNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVEEEVGK 367
           PTS PP        ++RLF   SSSE  +INTKVNFS+  SD +++DD    +  +E+ K
Sbjct: 71  PTSSPPPP---RRFHSRLF---SSSEPTRINTKVNFSLGDSDAEDDDDENKKTTPKEIDK 130

Query: 368 SKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQ 427
           SK LPPPYDPF+KKPV+EE EDPK+LQEIFH MR DG LNNAVKMFD LSKDGLTHEAL+
Sbjct: 131 SK-LPPPYDPFNKKPVIEEPEDPKDLQEIFHNMRNDGLLNNAVKMFDALSKDGLTHEALE 190

Query: 428 LFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLA 487
           LF+QIKDKGHMPDVVAHTAV+EAY NAGQSK+A KV++RMLASGVTPNAYTYTVLIKGLA
Sbjct: 191 LFAQIKDKGHMPDVVAHTAVVEAYANAGQSKDALKVFMRMLASGVTPNAYTYTVLIKGLA 250

Query: 488 ADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNE 547
           ADPK++GDAKK+LLEMMG+G+RPNAG YTAVFEA  ++ KVE+A + L QM+AKGF P+E
Sbjct: 251 ADPKYLGDAKKYLLEMMGKGMRPNAGAYTAVFEAFAKEQKVEDAEKFLEQMKAKGFKPDE 310

Query: 548 KDVKEILHTKRGRGPLFRTLINILFNK 574
           K VKE+L+ KRG  P+FRT++NILF K
Sbjct: 311 KAVKEVLNNKRG--PVFRTVMNILFGK 328

[Close]
BLAST of Csor.00g267540 vs. ExPASy TrEMBL
Match: A0A6P3YRG9 (pentatricopeptide repeat-containing protein At4g38150-like OS=Ziziphus jujuba OX=326968 GN=LOC107403546 PE=4 SV=1)

HSP 1 Score: 363 bits (931), Expect = 2.12e-118
Identity = 187/267 (70.04%), Postives = 222/267 (83.15%), Query Frame = 0 

Query: 308 PTSKPPAIFYINACNNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVEEEVGK 367
           PTS PP        ++RLF   SSSE  +INTKVNFS+  SD +++DD    +  +E+ K
Sbjct: 71  PTSSPPPP---RRFHSRLF---SSSEPTRINTKVNFSLGDSDAEDDDDENKKTTPKEIDK 130

Query: 368 SKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQ 427
           SK LPPPYDPF+KKPV+EE EDPK+LQEIFH MR DG LNNAVKMFD LSKDGLTHEAL+
Sbjct: 131 SK-LPPPYDPFNKKPVIEEPEDPKDLQEIFHNMRNDGLLNNAVKMFDALSKDGLTHEALE 190

Query: 428 LFSQIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLA 487
           LF+QIKDKGHMPDVVAHTAV+EAY NAGQSKEA KV++RMLASGVTPNAYTYTVLIKGLA
Sbjct: 191 LFAQIKDKGHMPDVVAHTAVVEAYANAGQSKEALKVFMRMLASGVTPNAYTYTVLIKGLA 250

Query: 488 ADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNE 547
           ADPK++GDAKK+LLEMMG+G+RPNAG YTAVFEA  ++ KVE+A + L +M+AKGF P+E
Sbjct: 251 ADPKYLGDAKKYLLEMMGKGMRPNAGAYTAVFEAFAKEQKVEDAEKFLEEMKAKGFKPDE 310

Query: 548 KDVKEILHTKRGRGPLFRTLINILFNK 574
           K VKE+L+ KRG  P+FRT++NILF K
Sbjct: 311 KAVKEVLNNKRG--PVFRTVMNILFGK 328

[Close]
BLAST of Csor.00g267540 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 328.6 bits (841), Expect = 1.0e-89
Identity = 171/250 (68.40%), Postives = 201/250 (80.40%), Query Frame = 0 

Query: 325 LFAYSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVEEEVGKSKNLPPPYDPFSKKPVV 384
           +FA   SSE  ++NTKVNFS+S  D DEE + +   V E+  K +  PPPYDPFSKKP +
Sbjct: 119 VFARQFSSETKRVNTKVNFSLSDDDSDEETETQ---VTEDSKKQEPPPPPYDPFSKKPAI 178

Query: 385 EEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQLFSQIKDKGHMPDVVAH 444
           EE EDPKNLQEIFHKMRT+GF N AVKMFD LSKDG THEAL+LFSQIKDK  MPDVVAH
Sbjct: 179 EEPEDPKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAH 238

Query: 445 TAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLLEMM 504
           TA++EAY NAGQ+KE  KV++RMLASGV+PNAYTY+VLIKGLAAD K   DAKK+LLEMM
Sbjct: 239 TAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMM 298

Query: 505 GRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLF 564
           G G+ PNA TYTAVFEA VR+ K E ARELL +M+ KGFVP+EK V+E L  KRG+  +F
Sbjct: 299 GNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRGQ--VF 358

Query: 565 RTLINILFNK 575
           RT+IN+LF+K
Sbjct: 359 RTVINLLFDK 363

[Close]
BLAST of Csor.00g267540 vs. TAIR 10
Match: AT1G79020.1 (Enhancer of polycomb-like transcription factor protein )

HSP 1 Score: 194.5 bits (493), Expect = 2.3e-49
Identity = 109/188 (57.98%), Postives = 137/188 (72.87%), Query Frame = 0 

Query: 52  VRRNLEQAKTLLEALIKREEKKRDLMESEVSLQRVHLKYKHETELLEESLALPRFLP--F 111
           VRRNL QA+++LEALIKREEKKRD+M+SEVSLQR+ L+Y+HETELLE+SLA+P F P   
Sbjct: 250 VRRNLGQAQSILEALIKREEKKRDVMDSEVSLQRIQLQYRHETELLEDSLAMPGFQPTTT 309

Query: 112 SCKFGSSEDEFVELDDIATSR---PPRIRISGSFRETNMIVLPTESMKQE-NRQQLPHGW 171
           S KFGSS+DE ++ DD  ++R    P +  S  F   N+       +KQE  R+Q  HGW
Sbjct: 310 SYKFGSSDDELMDSDDHTSTRVRTRPAVIPSSRFTNLNLNASHPGGIKQEVRRRQSQHGW 369

Query: 172 LHKMDPLEPVLLFAKPLVAEKLAAANIVPPSAESPTRNSVSMGSHKLRGRIGRGGRIIFD 231
           LH++DP EPV+LF KPLV +KLAAA IVPP+ +S    S      + +GRIGRGGRIIFD
Sbjct: 370 LHRLDPNEPVMLFTKPLVPDKLAAAGIVPPTPDS----SPGQPPSRFQGRIGRGGRIIFD 429

Query: 232 RWNPLMQT 234
           RWNPLMQ+
Sbjct: 430 RWNPLMQS 433

[Close]
BLAST of Csor.00g267540 vs. TAIR 10
Match: AT1G16690.1 (Enhancer of polycomb-like transcription factor protein )

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-45
Identity = 105/185 (56.76%), Postives = 130/185 (70.27%), Query Frame = 0 

Query: 52  VRRNLEQAKTLLEALIKREEKKRDLMESEVSLQRVHLKYKHETELLEESLALPRF-LPFS 111
           VRRNL+QAKT+LEALIKREEKKRD M SEVSLQR+ LKYK+ETELLE+SLAL  F L  +
Sbjct: 252 VRRNLDQAKTILEALIKREEKKRDFMASEVSLQRIQLKYKNETELLEDSLALAGFPLSTA 311

Query: 112 CKFGSSEDEFVELDDIATSRP---PRIRISGSFRETNMIVLPTESMKQENRQQLPHGWLH 171
            +FGSSEDEF++ DD  T++    P       F ++N+      S+KQE R+    GWLH
Sbjct: 312 YRFGSSEDEFMDSDDPTTTQTCTRPSFTPHRRFTDSNLARAQAGSIKQEARRL---GWLH 371

Query: 172 KMDPLEPVLLFAKPLVAEKLAAANIVPPSAESPTRNSVSMGSHKLRGRIGRGGRIIFDRW 231
           K++P EPV+LF K LV +KLAAA I+PPS           G  + +GR+GRGGRI+FDRW
Sbjct: 372 KLNPNEPVMLFTKALVPDKLAAAGIIPPS-------DARSGRARFQGRMGRGGRIVFDRW 426

Query: 232 NPLMQ 233
           NPL Q
Sbjct: 432 NPLNQ 426

[Close]
BLAST of Csor.00g267540 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-28
Identity = 78/233 (33.48%), Postives = 128/233 (54.94%), Query Frame = 0 

Query: 322 NNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVEEEVGKSKNLPPPYDPFSKK 381
           N  L    SS+   +   +   ++  SD    DD  +   +  V +     P  + + ++
Sbjct: 51  NRPLRGERSSNSHREPPARQAHNLGKSDTTLSDDGFLEQFKLGVNQDSRETPKPEQYPQE 110

Query: 382 PVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQLFSQIKDKGHMPDV 441
           P+      P++  EIF KM+  G + NAV M D L KDGL  EA++LF  ++DKG +P+V
Sbjct: 111 PL----PPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEV 170

Query: 442 VAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLL 501
           V +TAV+EA+  A + ++A +++ +M  +G+ PNA++Y VL++GL  +   + DA  F  
Sbjct: 171 VIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL-YNCNMLDDAVAFCS 230

Query: 502 EMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNEKDVKEIL 555
           EM+  G  PN  T+  + +AL R   VE+A+  +  +  KGF  N K VKE +
Sbjct: 231 EMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 278

[Close]
BLAST of Csor.00g267540 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-28
Identity = 78/233 (33.48%), Postives = 128/233 (54.94%), Query Frame = 0 

Query: 322 NNRLFAYSSSSEANKINTKVNFSISHSDEDEEDDFRVGSVEEEVGKSKNLPPPYDPFSKK 381
           N  L    SS+   +   +   ++  SD    DD  +   +  V +     P  + + ++
Sbjct: 51  NRPLRGERSSNSHREPPARQAHNLGKSDTTLSDDGFLEQFKLGVNQDSRETPKPEQYPQE 110

Query: 382 PVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDELSKDGLTHEALQLFSQIKDKGHMPDV 441
           P+      P++  EIF KM+  G + NAV M D L KDGL  EA++LF  ++DKG +P+V
Sbjct: 111 PL----PPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEV 170

Query: 442 VAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKKFLL 501
           V +TAV+EA+  A + ++A +++ +M  +G+ PNA++Y VL++GL  +   + DA  F  
Sbjct: 171 VIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL-YNCNMLDDAVAFCS 230

Query: 502 EMMGRGLRPNAGTYTAVFEALVRDTKVEEARELLVQMEAKGFVPNEKDVKEIL 555
           EM+  G  PN  T+  + +AL R   VE+A+  +  +  KGF  N K VKE +
Sbjct: 231 EMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 278

The following BLAST results are available for this feature:
BLAST of Csor.00g267540 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZL51.9e-2733.48Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX... [more]
B8Y6I01.3e-1538.89Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... [more]
Q8S8P62.4e-1434.00Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana OX... [more]
Q9LSL92.4e-1433.55Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... [more]
Q3EDF84.0e-1430.91Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
BLAST of Csor.00g267540 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588578.10.0100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6588516.10.093.31Protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic, partial [Cucurbita argy... [more]
XP_022931685.12.86e-21191.42pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata][more]
XP_022969848.11.75e-19693.49pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima][more]
XP_023530438.12.35e-19492.83pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita pepo subsp... [more]
BLAST of Csor.00g267540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F0641.39e-21191.42pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata... [more]
A0A6J1I2518.49e-19793.49pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima O... [more]
A0A6J1DUN87.76e-16079.94pentatricopeptide repeat-containing protein At4g38150-like OS=Momordica charanti... [more]
A0A6P3ZML72.12e-11870.04pentatricopeptide repeat-containing protein At4g38150-like OS=Ziziphus jujuba OX... [more]
A0A6P3YRG92.12e-11870.04pentatricopeptide repeat-containing protein At4g38150-like OS=Ziziphus jujuba OX... [more]
BLAST of Csor.00g267540 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G03560.21.0e-8968.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G79020.12.3e-4957.98Enhancer of polycomb-like transcription factor protein [more]
AT1G16690.11.6e-4556.76Enhancer of polycomb-like transcription factor protein [more]
AT4G38150.11.3e-2833.48Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G38150.21.3e-2833.48Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..80
NoneNo IPR availablePANTHERPTHR46128:SF173SUBFAMILY NOT NAMEDcoord: 327..557
NoneNo IPR availablePANTHERPTHR46128MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1coord: 327..557
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 383..490
e-value: 2.7E-21
score: 77.7
coord: 491..560
e-value: 1.2E-10
score: 43.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 439..487
e-value: 2.5E-14
score: 53.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 412..436
e-value: 0.21
score: 11.9
coord: 514..543
e-value: 0.0061
score: 16.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 514..547
e-value: 2.2E-6
score: 25.5
coord: 442..476
e-value: 2.0E-6
score: 25.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 475..510
score: 9.97484
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 511..545
score: 10.928473
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 440..474
score: 11.257313

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g267540.m01Csor.00g267540.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0032777 Piccolo NuA4 histone acetyltransferase complex
molecular_function GO:0005515 protein binding