Csor.00g266380 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGACGGAGAAGCCAGTGATGGTGATCGGCATCGACGACAGTGAATATGCAATCGCCGCTCTGGAGTGGACACTAGATCACTTCTCTTCAGCCATATATCCTCCTCCTTTCAAGATCATCGTTGTCCACGCCAAACCGATTCCCGAAACCTTCGTCGGAGTCGCCGGACCAGGAAGTAAGATCGATCCTCCTCCTCCTCATCTGATCTGCTAATTCCTTAATTTCATGTTCGAAAGTAAATAATTGCGAAATTATATGTAATCAGTGGTTTTTGGATCGGATCCTGGATTGTACCAAGTTTTGGACCAGAATTTGAAGAGAAAGGCCGCCAGAATCATCGAGAAAGCGAGAGAGATCTGCGCCGCTAAATCGGTAATCGTCGATCTGTAAAATCAATGAATATGAACAGAAATTTGAGTGAATTGAATTGAATTGAATTGAAATTACAGGTGAGTGAAGTGAAGTTTGAGGTGGAAGAAGGAGATGCTAGGTATGTACTGTGCAAGGCGGTTAGTGAGCACAATGCTTCAATGCTGGTGGTGGGAAGCCATGGCTATGGAGCCATTAAGAGGTACTTGCTTTATTAA ATGGCGGCGACGGAGAAGCCAGTGATGGTGATCGGCATCGACGACAGTGAATATGCAATCGCCGCTCTGGAGTGGACACTAGATCACTTCTCTTCAGCCATATATCCTCCTCCTTTCAAGATCATCGTTGTCCACGCCAAACCGATTCCCGAAACCTTCGTCGGAGTCGCCGGACCAGGAATGGTTTTTGGATCGGATCCTGGATTGTACCAAGTTTTGGACCAGAATTTGAAGAGAAAGGCCGCCAGAATCATCGAGAAAGCGAGAGAGATCTGCGCCGCTAAATCGGTGAGTGAAGTGAAGTTTGAGGTGGAAGAAGGAGATGCTAGGTATGTACTGTGCAAGGCGGTTAGTGAGCACAATGCTTCAATGCTGGTGGTGGGAAGCCATGGCTATGGAGCCATTAAGAGGTACTTGCTTTATTAA ATGGCGGCGACGGAGAAGCCAGTGATGGTGATCGGCATCGACGACAGTGAATATGCAATCGCCGCTCTGGAGTGGACACTAGATCACTTCTCTTCAGCCATATATCCTCCTCCTTTCAAGATCATCGTTGTCCACGCCAAACCGATTCCCGAAACCTTCGTCGGAGTCGCCGGACCAGGAATGGTTTTTGGATCGGATCCTGGATTGTACCAAGTTTTGGACCAGAATTTGAAGAGAAAGGCCGCCAGAATCATCGAGAAAGCGAGAGAGATCTGCGCCGCTAAATCGGTGAGTGAAGTGAAGTTTGAGGTGGAAGAAGGAGATGCTAGGTATGTACTGTGCAAGGCGGTTAGTGAGCACAATGCTTCAATGCTGGTGGTGGGAAGCCATGGCTATGGAGCCATTAAGAGGTACTTGCTTTATTAA MAATEKPVMVIGIDDSEYAIAALEWTLDHFSSAIYPPPFKIIVVHAKPIPETFVGVAGPGMVFGSDPGLYQVLDQNLKRKAARIIEKAREICAAKSVSEVKFEVEEGDARYVLCKAVSEHNASMLVVGSHGYGAIKRYLLY Homology
BLAST of Csor.00g266380 vs. NCBI nr
Match: KAG6575828.1 (hypothetical protein SDJN03_26467, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 281 bits (720), Expect = 1.37e-95 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Csor.00g266380 vs. NCBI nr
Match: KAG7014364.1 (Universal stress protein A-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 275 bits (702), Expect = 1.67e-92 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Csor.00g266380 vs. NCBI nr
Match: XP_022953726.1 (universal stress protein PHOS34-like [Cucurbita moschata]) HSP 1 Score: 274 bits (701), Expect = 2.38e-92 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Csor.00g266380 vs. NCBI nr
Match: XP_023547995.1 (universal stress protein PHOS34-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271 bits (694), Expect = 2.78e-91 Identity = 136/140 (97.14%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Csor.00g266380 vs. NCBI nr
Match: XP_022991250.1 (universal stress protein PHOS34-like [Cucurbita maxima]) HSP 1 Score: 271 bits (693), Expect = 3.94e-91 Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of Csor.00g266380 vs. ExPASy TrEMBL
Match: A0A6J1GNW2 (universal stress protein PHOS34-like OS=Cucurbita moschata OX=3662 GN=LOC111456172 PE=4 SV=1) HSP 1 Score: 274 bits (701), Expect = 1.15e-92 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Csor.00g266380 vs. ExPASy TrEMBL
Match: A0A6J1JSC9 (universal stress protein PHOS34-like OS=Cucurbita maxima OX=3661 GN=LOC111487963 PE=4 SV=1) HSP 1 Score: 271 bits (693), Expect = 1.91e-91 Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of Csor.00g266380 vs. ExPASy TrEMBL
Match: A0A6J1CXL5 (universal stress protein PHOS32-like OS=Momordica charantia OX=3673 GN=LOC111015361 PE=4 SV=1) HSP 1 Score: 212 bits (540), Expect = 4.48e-68 Identity = 108/140 (77.14%), Postives = 119/140 (85.00%), Query Frame = 0
BLAST of Csor.00g266380 vs. ExPASy TrEMBL
Match: A0A0A0K632 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G397020 PE=4 SV=1) HSP 1 Score: 204 bits (519), Expect = 6.82e-65 Identity = 101/140 (72.14%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of Csor.00g266380 vs. ExPASy TrEMBL
Match: A0A6J1GP47 (uncharacterized protein LOC111456168 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456168 PE=4 SV=1) HSP 1 Score: 195 bits (496), Expect = 8.70e-62 Identity = 95/140 (67.86%), Postives = 114/140 (81.43%), Query Frame = 0
BLAST of Csor.00g266380 vs. TAIR 10
Match: AT2G47710.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 135.2 bits (339), Expect = 4.1e-32 Identity = 71/136 (52.21%), Postives = 94/136 (69.12%), Query Frame = 0
BLAST of Csor.00g266380 vs. TAIR 10
Match: AT5G49050.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 85.5 bits (210), Expect = 3.7e-17 Identity = 48/123 (39.02%), Postives = 75/123 (60.98%), Query Frame = 0
BLAST of Csor.00g266380 vs. TAIR 10
Match: AT3G11930.3 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12 Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 0
BLAST of Csor.00g266380 vs. TAIR 10
Match: AT3G11930.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 68.6 bits (166), Expect = 4.7e-12 Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 0
BLAST of Csor.00g266380 vs. TAIR 10
Match: AT3G11930.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 68.2 bits (165), Expect = 6.2e-12 Identity = 45/142 (31.69%), Postives = 77/142 (54.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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