Csor.00g266080 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g266080
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr17: 9136032 .. 9137225 (+)
RNA-Seq ExpressionCsor.00g266080
SyntenyCsor.00g266080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCGATCAAATCTTTAATCTCCATAGCTCTTCTAGCTCTTCTCTTGCTCTCTGAACACCTACCCATTTCCGCCGCCGATCACGGCGTGGCTCCCAGTCCTCTTGCCGGAGTGTTTCGCCGGGACACCCTTCAGACGGCAGAGCGTCATCAAGTTGCAGAGAATGGAATTGGATATCAGTACTCTTTTGAACAAAAAATCAGAAGGCGAGCCCGACGAGCTGTTAGGCGAGCCGAAGGTCCAAGTCCATCGTCGGCGAATTGGAGCCGAACGTCGTCGTTTGGGATCGGCTCTCTGCTGTGTCTCTGTACTGTCTTTGGTTTGTTTTTGTGAAGTGAATAATGGTGATTCACTACTCTGAATTTGTCATCGGTTTATTCATTTATTATTTTTTTGATAAAAAATTTGAGTTGTATTTTACCAATTTAATTAAATTCATTTCCTATATTTTCTTAATATTTTGTTACATTTTGTCAATTTTTAATAATAAAATAACATTTTGAATTTACTCGATAAATATTGTATCGAAAGCAGCTCCAATCACTCTTACAACTTACCCACGAGCCAAGGCCCTCCACCAAATAGGAAGGGAAGTCCCATCTAGACGGAGAATGAAGAGTGACTGATGAACATTTTTTAACTATCACATAGATAAACTCGAGGGACGATATTATATTTTCTTATCTACCTTTGATTTTCTACTCCACTCTGCTTAATATTAAATTTTAATTTTTTAAAAAGTATATTTGTAGAACTCAATTATAAAAAATATATTGATTTATTATTCTTTTATCATTTTTAAATAAAGATATTAAGAAAATAAAATAAATAATAATAAAATGAGAAAAATTAATATTGACACAAATAAATAAAGAATTTAGGAGGAACATCTTTAATCACTCTCAGGCAGTTCAACAGCTGATGGCGGGGAGGCTTCGAATTCTCTAGCCCGGACGCTTCGCCGGAACGTCCTTTCAGACGGCGGCTCAGCCGACTGCAGAGAACTACGGCGAGTCCTCTTCGGAGGAGAAGACGAATGTTCATATTAAAAAGCGGATCCGACCATTACTAATCGGCGGCCATAACCGTACATTCGCCGCGAATCGAAGCCCAACGCCGTCTTTTGGCATTGTTTTGTTGGAATTGCGTTTCGATTCGTTTCAGGTTTCAGGTTTCAGGTTTCAGGCTTAG

mRNA sequence

ATGGCTCCGATCAAATCTTTAATCTCCATAGCTCTTCTAGCTCTTCTCTTGCTCTCTGAACACCTACCCATTTCCGCCGCCGATCACGGCGTGGCTCCCAGTCCTCTTGCCGGAGTGTTTCGCCGGGACACCCTTCAGACGGCAGAGCGTCATCAAGTTGCAGAGAATGGAATTGGATATCAGTACTCTTTTGAACAAAAAATCAGAAGGCGAGCCCGACGAGCTGTTAGGCGAGCCGAAGGTCCAAGTCCATCGTCGGCGAATTGGAGCCGAACGTCGTCGTTTGGGATCGGCTCTCTGCTGTGTCTCTGTACTCCCGGACGCTTCGCCGGAACGTCCTTTCAGACGGCGGCTCAGCCGACTGCAGAGAACTACGGCGAGTCCTCTTCGGAGGAGAAGACGAATGTTCATATTAAAAAGCGGATCCGACCATTACTAATCGGCGGCCATAACCGTACATTCGCCGCGAATCGAAGCCCAACGCCGTCTTTTGGCATTGTTTTGTTGGAATTGCGTTTCGATTCGTTTCAGGTTTCAGGTTTCAGGTTTCAGGCTTAG

Coding sequence (CDS)

ATGGCTCCGATCAAATCTTTAATCTCCATAGCTCTTCTAGCTCTTCTCTTGCTCTCTGAACACCTACCCATTTCCGCCGCCGATCACGGCGTGGCTCCCAGTCCTCTTGCCGGAGTGTTTCGCCGGGACACCCTTCAGACGGCAGAGCGTCATCAAGTTGCAGAGAATGGAATTGGATATCAGTACTCTTTTGAACAAAAAATCAGAAGGCGAGCCCGACGAGCTGTTAGGCGAGCCGAAGGTCCAAGTCCATCGTCGGCGAATTGGAGCCGAACGTCGTCGTTTGGGATCGGCTCTCTGCTGTGTCTCTGTACTCCCGGACGCTTCGCCGGAACGTCCTTTCAGACGGCGGCTCAGCCGACTGCAGAGAACTACGGCGAGTCCTCTTCGGAGGAGAAGACGAATGTTCATATTAAAAAGCGGATCCGACCATTACTAATCGGCGGCCATAACCGTACATTCGCCGCGAATCGAAGCCCAACGCCGTCTTTTGGCATTGTTTTGTTGGAATTGCGTTTCGATTCGTTTCAGGTTTCAGGTTTCAGGTTTCAGGCTTAG

Protein sequence

MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGYQYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLCTPGRFAGTSFQTAAQPTAENYGESSSEEKTNVHIKKRIRPLLIGGHNRTFAANRSPTPSFGIVLLELRFDSFQVSGFRFQA
Homology
BLAST of Csor.00g266080 vs. NCBI nr
Match: KAG6575858.1 (hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 360 bits (924), Expect = 2.97e-125
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0

Query: 1   MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGY 60
           MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGY
Sbjct: 1   MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGY 60

Query: 61  QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLCTPGRFAGTSFQTAAQP 120
           QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLCTPGRFAGTSFQTAAQP
Sbjct: 61  QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLCTPGRFAGTSFQTAAQP 120

Query: 121 TAENYGESSSEEKTNVHIKKRIRPLLIGGHNRTFAANRSPTPSFGIVLLELRFDSFQVSG 180
           TAENYGESSSEEKTNVHIKKRIRPLLIGGHNRTFAANRSPTPSFGIVLLELRFDSFQVSG
Sbjct: 121 TAENYGESSSEEKTNVHIKKRIRPLLIGGHNRTFAANRSPTPSFGIVLLELRFDSFQVSG 180

Query: 181 FRFQA 185
           FRFQA
Sbjct: 181 FRFQA 185

BLAST of Csor.00g266080 vs. NCBI nr
Match: XP_022954099.1 (uncharacterized protein LOC111456466 [Cucurbita moschata])

HSP 1 Score: 197 bits (500), Expect = 1.73e-60
Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0

Query: 1   MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGY 60
           MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLA VFRRDTLQTAERHQVAENGIGY
Sbjct: 90  MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLARVFRRDTLQTAERHQVAENGIGY 149

Query: 61  QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLCT 105
           QYSFEQKIRRRARRAVRRAEGPSPSSANWS+TSSFG+GSLLCLCT
Sbjct: 150 QYSFEQKIRRRARRAVRRAEGPSPSSANWSQTSSFGVGSLLCLCT 194

BLAST of Csor.00g266080 vs. NCBI nr
Match: XP_022992473.1 (uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 190 bits (482), Expect = 3.93e-58
Identity = 100/105 (95.24%), Postives = 101/105 (96.19%), Query Frame = 0

Query: 1   MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGY 60
           MAPIKSLISIALLALLLL E LPISAADHGVAPSPLAGVFR DTLQTAERHQVAENGIG 
Sbjct: 63  MAPIKSLISIALLALLLLFERLPISAADHGVAPSPLAGVFRLDTLQTAERHQVAENGIGN 122

Query: 61  QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLCT 105
           QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFG+GSLLCLCT
Sbjct: 123 QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGVGSLLCLCT 167

BLAST of Csor.00g266080 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 73.6 bits (179), Expect = 2.74e-13
Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 0

Query: 1   MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQT-AERHQVAENGIG 60
           MA IK+L+SIAL+ALLL  E LP SAA H  A + LAG+ RR+ +QT A+ HQVAE    
Sbjct: 1   MAAIKALLSIALIALLLFFESLPTSAAVHRGASTSLAGILRRNIVQTTADHHQVAEK--- 60

Query: 61  YQYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCL 103
               F   I+RR R        P  S+AN SR +  G+GS+LC+
Sbjct: 61  ---KFNVHIKRRMRMRPVLIGRPKTSAANRSREAFCGVGSMLCI 98

BLAST of Csor.00g266080 vs. NCBI nr
Match: KGN45443.2 (hypothetical protein Csa_016459 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 1.99e-12
Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 0

Query: 31  VAPSPLAGVFRRDTLQTAERHQVAENGIGYQYSFEQKI-RRRARRAVRRAEGPSPSSANW 90
           +AP+   G+F     Q  E  QV EN  GY+YSFEQKI ++RARR+ + AEGPSPS AN 
Sbjct: 1   MAPNSPIGMF-----QMTEYQQVVENKNGYRYSFEQKIVKKRARRSKKEAEGPSPSMANR 60

Query: 91  SRTSSFGIGSLLCLC 104
           SR + F I SLLC+C
Sbjct: 61  SRMTWFDIQSLLCMC 70

BLAST of Csor.00g266080 vs. ExPASy TrEMBL
Match: A0A6J1GRX2 (uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC111456466 PE=4 SV=1)

HSP 1 Score: 197 bits (500), Expect = 8.36e-61
Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0

Query: 1   MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGY 60
           MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLA VFRRDTLQTAERHQVAENGIGY
Sbjct: 90  MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLARVFRRDTLQTAERHQVAENGIGY 149

Query: 61  QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLCT 105
           QYSFEQKIRRRARRAVRRAEGPSPSSANWS+TSSFG+GSLLCLCT
Sbjct: 150 QYSFEQKIRRRARRAVRRAEGPSPSSANWSQTSSFGVGSLLCLCT 194

BLAST of Csor.00g266080 vs. ExPASy TrEMBL
Match: A0A6J1JZB1 (uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=4 SV=1)

HSP 1 Score: 190 bits (482), Expect = 1.90e-58
Identity = 100/105 (95.24%), Postives = 101/105 (96.19%), Query Frame = 0

Query: 1   MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGY 60
           MAPIKSLISIALLALLLL E LPISAADHGVAPSPLAGVFR DTLQTAERHQVAENGIG 
Sbjct: 63  MAPIKSLISIALLALLLLFERLPISAADHGVAPSPLAGVFRLDTLQTAERHQVAENGIGN 122

Query: 61  QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLCT 105
           QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFG+GSLLCLCT
Sbjct: 123 QYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGVGSLLCLCT 167

BLAST of Csor.00g266080 vs. ExPASy TrEMBL
Match: A0A0A0K934 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394070 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.23e-18
Identity = 55/96 (57.29%), Postives = 66/96 (68.75%), Query Frame = 0

Query: 4  IKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGYQYS 63
          IKSLIS+ALLALLLLS     SA +H +AP+   G+F     Q  E  QV EN  GY+YS
Sbjct: 5  IKSLISVALLALLLLSRFPSTSAVNHNMAPNSPIGMF-----QMTEYQQVVENKNGYRYS 64

Query: 64 FEQKI-RRRARRAVRRAEGPSPSSANWSRTSSFGIG 98
          FEQKI ++RARR+ + AEGPSPS AN SR + F IG
Sbjct: 65 FEQKIVKKRARRSKKEAEGPSPSMANRSRMTCFIIG 95

BLAST of Csor.00g266080 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.19e-05
Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 0

Query: 1   MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGY 60
           MA IKSLISI+LLALL  SE L  SAA+   A + +  + RR+ LQTA  H++A++    
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTAT-HEIADSEGKM 60

Query: 61  QYSFEQKIRRRARR-AVRRAEGPSPSSANWSRTSSFGIGSLL 101
               ++    R R        G   S+AN SR  SFG+G LL
Sbjct: 61  NVRIKKGGLGRFRPIGAGTGTGTRSSAANRSRVDSFGLGFLL 101

BLAST of Csor.00g266080 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 8.38e-05
Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 0

Query: 1   MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGY 60
           MA IKSL+ I+LLALL  SE L  SAAD   A + + G+ RR+ LQTA  H++A++    
Sbjct: 1   MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTAT-HEIADS---- 60

Query: 61  QYSFEQKIRRRARRAVRRAE------GPSPSSANWSRTSSFGIGSLL 101
           +      I+R     +R         G   S+A+ S+ +SFG+G LL
Sbjct: 61  EGKMNVHIKRGGGGRIRPVAAGTGFTGNRKSAASRSQVASFGLGFLL 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6575858.12.97e-125100.00hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022954099.11.73e-6097.14uncharacterized protein LOC111456466 [Cucurbita moschata][more]
XP_022992473.13.93e-5895.24uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima][more]
KAG6593163.12.74e-1348.08hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN45443.21.99e-1254.67hypothetical protein Csa_016459 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1GRX28.36e-6197.14uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC1114564... [more]
A0A6J1JZB11.90e-5895.24uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A0A0K9341.23e-1857.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394070 PE=4 SV=1[more]
A0A0A0KAQ72.19e-0542.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1[more]
A0A5A7VLE58.38e-0539.25Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g266080.m01Csor.00g266080.m01mRNA