Csor.00g266080 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCGATCAAATCTTTAATCTCCATAGCTCTTCTAGCTCTTCTCTTGCTCTCTGAACACCTACCCATTTCCGCCGCCGATCACGGCGTGGCTCCCAGTCCTCTTGCCGGAGTGTTTCGCCGGGACACCCTTCAGACGGCAGAGCGTCATCAAGTTGCAGAGAATGGAATTGGATATCAGTACTCTTTTGAACAAAAAATCAGAAGGCGAGCCCGACGAGCTGTTAGGCGAGCCGAAGGTCCAAGTCCATCGTCGGCGAATTGGAGCCGAACGTCGTCGTTTGGGATCGGCTCTCTGCTGTGTCTCTGTACTGTCTTTGGTTTGTTTTTGTGAAGTGAATAATGGTGATTCACTACTCTGAATTTGTCATCGGTTTATTCATTTATTATTTTTTTGATAAAAAATTTGAGTTGTATTTTACCAATTTAATTAAATTCATTTCCTATATTTTCTTAATATTTTGTTACATTTTGTCAATTTTTAATAATAAAATAACATTTTGAATTTACTCGATAAATATTGTATCGAAAGCAGCTCCAATCACTCTTACAACTTACCCACGAGCCAAGGCCCTCCACCAAATAGGAAGGGAAGTCCCATCTAGACGGAGAATGAAGAGTGACTGATGAACATTTTTTAACTATCACATAGATAAACTCGAGGGACGATATTATATTTTCTTATCTACCTTTGATTTTCTACTCCACTCTGCTTAATATTAAATTTTAATTTTTTAAAAAGTATATTTGTAGAACTCAATTATAAAAAATATATTGATTTATTATTCTTTTATCATTTTTAAATAAAGATATTAAGAAAATAAAATAAATAATAATAAAATGAGAAAAATTAATATTGACACAAATAAATAAAGAATTTAGGAGGAACATCTTTAATCACTCTCAGGCAGTTCAACAGCTGATGGCGGGGAGGCTTCGAATTCTCTAGCCCGGACGCTTCGCCGGAACGTCCTTTCAGACGGCGGCTCAGCCGACTGCAGAGAACTACGGCGAGTCCTCTTCGGAGGAGAAGACGAATGTTCATATTAAAAAGCGGATCCGACCATTACTAATCGGCGGCCATAACCGTACATTCGCCGCGAATCGAAGCCCAACGCCGTCTTTTGGCATTGTTTTGTTGGAATTGCGTTTCGATTCGTTTCAGGTTTCAGGTTTCAGGTTTCAGGCTTAG ATGGCTCCGATCAAATCTTTAATCTCCATAGCTCTTCTAGCTCTTCTCTTGCTCTCTGAACACCTACCCATTTCCGCCGCCGATCACGGCGTGGCTCCCAGTCCTCTTGCCGGAGTGTTTCGCCGGGACACCCTTCAGACGGCAGAGCGTCATCAAGTTGCAGAGAATGGAATTGGATATCAGTACTCTTTTGAACAAAAAATCAGAAGGCGAGCCCGACGAGCTGTTAGGCGAGCCGAAGGTCCAAGTCCATCGTCGGCGAATTGGAGCCGAACGTCGTCGTTTGGGATCGGCTCTCTGCTGTGTCTCTGTACTCCCGGACGCTTCGCCGGAACGTCCTTTCAGACGGCGGCTCAGCCGACTGCAGAGAACTACGGCGAGTCCTCTTCGGAGGAGAAGACGAATGTTCATATTAAAAAGCGGATCCGACCATTACTAATCGGCGGCCATAACCGTACATTCGCCGCGAATCGAAGCCCAACGCCGTCTTTTGGCATTGTTTTGTTGGAATTGCGTTTCGATTCGTTTCAGGTTTCAGGTTTCAGGTTTCAGGCTTAG ATGGCTCCGATCAAATCTTTAATCTCCATAGCTCTTCTAGCTCTTCTCTTGCTCTCTGAACACCTACCCATTTCCGCCGCCGATCACGGCGTGGCTCCCAGTCCTCTTGCCGGAGTGTTTCGCCGGGACACCCTTCAGACGGCAGAGCGTCATCAAGTTGCAGAGAATGGAATTGGATATCAGTACTCTTTTGAACAAAAAATCAGAAGGCGAGCCCGACGAGCTGTTAGGCGAGCCGAAGGTCCAAGTCCATCGTCGGCGAATTGGAGCCGAACGTCGTCGTTTGGGATCGGCTCTCTGCTGTGTCTCTGTACTCCCGGACGCTTCGCCGGAACGTCCTTTCAGACGGCGGCTCAGCCGACTGCAGAGAACTACGGCGAGTCCTCTTCGGAGGAGAAGACGAATGTTCATATTAAAAAGCGGATCCGACCATTACTAATCGGCGGCCATAACCGTACATTCGCCGCGAATCGAAGCCCAACGCCGTCTTTTGGCATTGTTTTGTTGGAATTGCGTTTCGATTCGTTTCAGGTTTCAGGTTTCAGGTTTCAGGCTTAG MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGYQYSFEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLCTPGRFAGTSFQTAAQPTAENYGESSSEEKTNVHIKKRIRPLLIGGHNRTFAANRSPTPSFGIVLLELRFDSFQVSGFRFQA Homology
BLAST of Csor.00g266080 vs. NCBI nr
Match: KAG6575858.1 (hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 360 bits (924), Expect = 2.97e-125 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of Csor.00g266080 vs. NCBI nr
Match: XP_022954099.1 (uncharacterized protein LOC111456466 [Cucurbita moschata]) HSP 1 Score: 197 bits (500), Expect = 1.73e-60 Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of Csor.00g266080 vs. NCBI nr
Match: XP_022992473.1 (uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima]) HSP 1 Score: 190 bits (482), Expect = 3.93e-58 Identity = 100/105 (95.24%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of Csor.00g266080 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 73.6 bits (179), Expect = 2.74e-13 Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 0
BLAST of Csor.00g266080 vs. NCBI nr
Match: KGN45443.2 (hypothetical protein Csa_016459 [Cucumis sativus]) HSP 1 Score: 70.5 bits (171), Expect = 1.99e-12 Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 0
BLAST of Csor.00g266080 vs. ExPASy TrEMBL
Match: A0A6J1GRX2 (uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC111456466 PE=4 SV=1) HSP 1 Score: 197 bits (500), Expect = 8.36e-61 Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of Csor.00g266080 vs. ExPASy TrEMBL
Match: A0A6J1JZB1 (uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=4 SV=1) HSP 1 Score: 190 bits (482), Expect = 1.90e-58 Identity = 100/105 (95.24%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of Csor.00g266080 vs. ExPASy TrEMBL
Match: A0A0A0K934 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394070 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.23e-18 Identity = 55/96 (57.29%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Csor.00g266080 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 2.19e-05 Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of Csor.00g266080 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 8.38e-05 Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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