Csor.00g266040 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g266040
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	rRNA-processing protein like
Location	Csor_Chr17: 9145875 .. 9148843 (+)
RNA-Seq Expression	Csor.00g266040
Synteny	Csor.00g266040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCGCACTGGAGAAGATGAAGTTCAGAATCGCCCAAAATCGGCATTCATGAAGAACAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGGCTTTCGCTTGAGGCGTTTGCCAATGTGAAATCAACTACCGACTACTATAACCCAGCTTTAATAAGTATGATACTGCTCAATCTGGGTTGCGTTTACTTCTTTTTGATTTTCTATCATCGCCTTAAGTTTGCTGCTCACTTGTTGATAGATCTGTGAAATCTAGGTTTTGAATTTTTGTTTAGCTGTTATGGACCTCGAAATGTTGTTGCAAAACCACTGTTTTTGTTGGAGAATGGAATTTGTAGAGAGAAATTCGTATTCGCCGGTGTTTGATTTCGTGTTTCGAATTGGGGAATTACATTGCAAAAACTGGTTTAATGGTTTGCTTTAGGAGATTGGATATTGGATGGTCTTTGTTTATGGTAGTGATTGATTCTCGTGTATGTATTTGTGTTCAGAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAAGAAGTTAGTAAAGCATCAGAATCACCACAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTCGAGGTATGGCCTGTTTAATGAGTATCTAATATCGCATAAAAGTTCAATTATGTTCATTTGTCTTCAATGCTTGGTGAGTTTTGAGACTCTAGAGATGCTTTTATTTATGTCGAATGAGAAAATGATATTGCAAAATATTGCATAAGATAAGATGATCTGTTGCAAGTTTTCCTACAAAGAGAGAGTGATGAGAGCTTTATTTCATTTTGGTTATTGAAGTTATTTTCGGTCACTATTTGTTGGTTGTGATTTGGATAAGCAATCAACCCAATGGGCATCTATTTCATTTCATATCATTCTTGTTATTCAAAGAGACAGAGAGGAACTCTGTTTCTTTTTGTTTGTTGAAGTTATTCTAGGTGCCTCTGTCACTATTTGTTTATTGTGATTTGAGTAGACATCGAACCCAACGCCCATCCATTTCATTCGCTTCTTATTATCGAGAGAGAGAGAGTGGAGCTTTGATTCCTTTTGTTTATTGAAGTGCCTGTCACTTTAGGTATTCAGAAAACTCGATGAACCCTACCCTAACAGTTTTTTAGTCTGAGTTATACTATGTTTTGAGTTGAGCTCGGTAATTTAAACGAAAACAGATAGGTTGGACTGGTTTATGGGTTTACTTCAACTTAGTTTAGTCGAATCCAATCGACCGAAGTTTATTATTAATTTAAAATATACTTATTCTTCAACAACTTTTAAAAATACTCGGGGAGGCAGCACTTGTAGTTATTAGAGGGCTCACTAACTGGAGCAACTATTCGAGGAGGCCACAATAATGTGACTAATAATTATTTAGGGATCATCTAGTGTGATGTCCCACATTAGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGAAAACCTTCTCCTAGCATATGCATTTTAAAGCCTTCAGGGGAAGCCCGGAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCCTGGGTTGTTTCAAATGGTATCAGAACCAGACACCAGACGATGTGTCAACCTTCTCGCTGTTCTCTGAAGGGGGGTAGACACGAGGCGGTGTGCTAGTAAGGACGCTGGGTCTCAAAGGGGGTGGATTTTGGGGGCGGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACGCTGGGCCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAAAACAAACCACCATTGATAAGGGTGTGGAAACCTTCCCCTAGCAGACGGCTTTTAAAGCCTTGAGGAGAAGCCCGAAAGTAAAAGTCCAAATAGGACAATATCTGCTAGCGGTGGGCCTGGATTGTTACATCAAGATTTTTGGTCTACATCCGATGAAAAACAGTCACATTGTGGTGGTGGTGCTTGAACAATTTTTTCCTTAACGGCCCTTACCACCTAATGGCGAGGTTCTTGAAGTGAACATGAAGCCATGGTGCACCATCACCAAAAGGCAAGGAGAGTACCATGTTGATGGCTGCCTTAATGGACTTTTTCCAGTCATAATAAATCTTTGGGTAGCCCACAGAAACATTAAAGGTTGTCTCACCTTATGGGCAGAGAAAAATAAGAACATGCAGCTATTGCTTGTTGCATTTAATTTTTCTCCTTCAGCCCTTTTATTTTTTATTTTTCTAAAATATCTTTACCTTTATTCATTATTTAAAATGATTTTGTTAATATTTTTCACAATTTGAAATTCTATTTTTTTAAATCTATTATTTATTGATTTATTTAATGCACCTGCTTCATTTAGTTTATTGTTTTTGGTTGCCTCTTGACTTGAGTTTATCAGGAGACTTGAGATATCTCTCGTAGTTTGAATATAGTGCGACTTACTAATCTCGAATCGTTGCGTTGGATCTAAAAGATATTCTCTATCCCGTCCAACCCAACCTATGAATACCGCTTTCTATCACTATTTGTTGATTGGGGTTTGGAGAGACATCGAACCCAACCGGCATCTGTTTCATTCCCTTCCTGTTATGATAAGAATCTTGTGTGTATAGAATGTGCTGCTTGAACTATTAACGGACTCGATTTCTTGCTGGTTCTTAAAGGGTGAAAATGGAACGAAATTGGAGAATCAGACGAACGGTAGACGTGGGAAAGAAAGGAATAAAGGCATACCTAGTCTCCAGGAACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTATTATCGCTGCAAAAAAGGAGGAACAAGAAAGGGCTAAAGCTAGACGGAACACCACAAGAGAAAAAATGCTCAAAAGGACGCAAAAAGGTCAGCCAGTTATGAAATACCGAATTGAGCATCTTTTGAAAACTATTGGAGCCTCAATGAACCAATGA

mRNA sequence

ATGAAGAAGCGCACTGGAGAAGATGAAGTTCAGAATCGCCCAAAATCGGCATTCATGAAGAACAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGGCTTTCGCTTGAGGCGTTTGCCAATGTGAAATCAACTACCGACTACTATAACCCAGCTTTAATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAAGAAGTTAGTAAAGCATCAGAATCACCACAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTCGAGGGTGAAAATGGAACGAAATTGGAGAATCAGACGAACGGTAGACGTGGGAAAGAAAGGAATAAAGGCATACCTAGTCTCCAGGAACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTATTATCGCTGCAAAAAAGGAGGAACAAGAAAGGGCTAAAGCTAGACGGAACACCACAAGAGAAAAAATGCTCAAAAGGACGCAAAAAGGTCAGCCAGTTATGAAATACCGAATTGAGCATCTTTTGAAAACTATTGGAGCCTCAATGAACCAATGA

Coding sequence (CDS)

ATGAAGAAGCGCACTGGAGAAGATGAAGTTCAGAATCGCCCAAAATCGGCATTCATGAAGAACAAGAAACACAAGAACATGAAACGGTTGGGAGGGAAGGGGCTTTCGCTTGAGGCGTTTGCCAATGTGAAATCAACTACCGACTACTATAACCCAGCTTTAATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAAGAAGTTAGTAAAGCATCAGAATCACCACAATGAGAGGCCCTCTAGCTCTACTGTTGGACTTGTCGAGGGTGAAAATGGAACGAAATTGGAGAATCAGACGAACGGTAGACGTGGGAAAGAAAGGAATAAAGGCATACCTAGTCTCCAGGAACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTATTATCGCTGCAAAAAAGGAGGAACAAGAAAGGGCTAAAGCTAGACGGAACACCACAAGAGAAAAAATGCTCAAAAGGACGCAAAAAGGTCAGCCAGTTATGAAATACCGAATTGAGCATCTTTTGAAAACTATTGGAGCCTCAATGAACCAATGA

Protein sequence

MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQREFYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSLQELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEHLLKTIGASMNQ

Homology

[Close]

BLAST of Csor.00g266040 vs. NCBI nr
Match: XP_022953215.1 (uncharacterized protein LOC111455827 [Cucurbita moschata] >KAG6575862.1 hypothetical protein SDJN03_26501, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 353 bits (906), Expect = 2.60e-122
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE
Sbjct: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL
Sbjct: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH
Sbjct: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMNQ 191
           LLKTIGASMNQ
Sbjct: 181 LLKTIGASMNQ 191

[Close]

BLAST of Csor.00g266040 vs. NCBI nr
Match: XP_023547647.1 (uncharacterized protein LOC111806525 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349 bits (895), Expect = 1.24e-120
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE
Sbjct: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHVSKY KLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL
Sbjct: 61  FYKNAKHVSKYMKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRN TREKMLKRTQKGQPVMKYRIEH
Sbjct: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMNQ 191
           LLKTIGASMNQ
Sbjct: 181 LLKTIGASMNQ 191

[Close]

BLAST of Csor.00g266040 vs. NCBI nr
Match: KAG7014397.1 (hypothetical protein SDJN02_24574 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342 bits (878), Expect = 8.78e-118
Identity = 191/208 (91.83%), Postives = 191/208 (91.83%), Query Frame = 0


Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE
Sbjct: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVE-----------------GENGTKLEN 120
           FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVE                 GENGTKLEN
Sbjct: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVENVLLELLTDSISCWFLKGENGTKLEN 120

Query: 121 QTNGRRGKERNKGIPSLQELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKM 180
           QTNGRRGKERNKGIPSLQELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKM
Sbjct: 121 QTNGRRGKERNKGIPSLQELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKM 180

Query: 181 LKRTQKGQPVMKYRIEHLLKTIGASMNQ 191
           LKRTQKGQPVMKYRIEHLLKTIGASMNQ
Sbjct: 181 LKRTQKGQPVMKYRIEHLLKTIGASMNQ 208

[Close]

BLAST of Csor.00g266040 vs. NCBI nr
Match: XP_022992472.1 (uncharacterized protein LOC111488792 [Cucurbita maxima])

HSP 1 Score: 336 bits (862), Expect = 1.33e-115
Identity = 182/191 (95.29%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKKRTGEDEVQ+RPKSAFM ++KHKNMKRLGGKG SLEAFANVKSTTDYYNPALIKKQRE
Sbjct: 1   MKKRTGEDEVQDRPKSAFMMSRKHKNMKRLGGKGHSLEAFANVKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHVSKYKKLVKHQNHHNERPSSST GLVEGENGTKLENQTN RRGKERNKGIPSL
Sbjct: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTAGLVEGENGTKLENQTNSRRGKERNKGIPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           QELYERKH+EKEKARMEKEAIIAAKKEEQERAKARRN TREKMLKRTQKGQPVMKYRIEH
Sbjct: 121 QELYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMNQ 191
           LLKTIGASMNQ
Sbjct: 181 LLKTIGASMNQ 191

[Close]

BLAST of Csor.00g266040 vs. NCBI nr
Match: XP_038876713.1 (uncharacterized protein LOC120069103 [Benincasa hispida])

HSP 1 Score: 300 bits (767), Expect = 4.11e-101
Identity = 165/188 (87.77%), Postives = 171/188 (90.96%), Query Frame = 0


Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MK  TG+DE QNR  S FMK+KKHKNMKRLGGKGLSLEAFAN KSTTDYYNPALIKKQRE
Sbjct: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHVSKYKKLVK+QN  NERPSSSTVGLVE EN TK EN TNGRRGKERNKG+PSL
Sbjct: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           Q LYERKHEEKEKARMEKEAIIAAKKEEQERAKARRN TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGAS 188
           LL+TIG +
Sbjct: 181 LLETIGGA 188

[Close]

BLAST of Csor.00g266040 vs. ExPASy TrEMBL
Match: A0A6J1GP14 (uncharacterized protein LOC111455827 OS=Cucurbita moschata OX=3662 GN=LOC111455827 PE=4 SV=1)

HSP 1 Score: 353 bits (906), Expect = 1.26e-122
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE
Sbjct: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL
Sbjct: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH
Sbjct: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMNQ 191
           LLKTIGASMNQ
Sbjct: 181 LLKTIGASMNQ 191

[Close]

BLAST of Csor.00g266040 vs. ExPASy TrEMBL
Match: A0A6J1JPX8 (uncharacterized protein LOC111488792 OS=Cucurbita maxima OX=3661 GN=LOC111488792 PE=4 SV=1)

HSP 1 Score: 336 bits (862), Expect = 6.42e-116
Identity = 182/191 (95.29%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MKKRTGEDEVQ+RPKSAFM ++KHKNMKRLGGKG SLEAFANVKSTTDYYNPALIKKQRE
Sbjct: 1   MKKRTGEDEVQDRPKSAFMMSRKHKNMKRLGGKGHSLEAFANVKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHVSKYKKLVKHQNHHNERPSSST GLVEGENGTKLENQTN RRGKERNKGIPSL
Sbjct: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTAGLVEGENGTKLENQTNSRRGKERNKGIPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           QELYERKH+EKEKARMEKEAIIAAKKEEQERAKARRN TREKMLKRTQKGQPVMKYRIEH
Sbjct: 121 QELYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNATREKMLKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMNQ 191
           LLKTIGASMNQ
Sbjct: 181 LLKTIGASMNQ 191

[Close]

BLAST of Csor.00g266040 vs. ExPASy TrEMBL
Match: A0A6J1H9B9 (uncharacterized protein LOC111461241 OS=Cucurbita moschata OX=3662 GN=LOC111461241 PE=4 SV=1)

HSP 1 Score: 294 bits (752), Expect = 3.70e-99
Identity = 161/190 (84.74%), Postives = 172/190 (90.53%), Query Frame = 0


Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MK R G+DE Q R KS FMK  KHKNMKRLGGKG S +AFAN KSTTDYYNPALIKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHV+KYKKLVKHQN+ NERPSSS+VGLVEGEN  K EN+TNGRRG ERNKG+PSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMKFENKTNGRRGNERNKGVPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMN 190
           LL+TIGASMN
Sbjct: 181 LLETIGASMN 190

[Close]

BLAST of Csor.00g266040 vs. ExPASy TrEMBL
Match: A0A1S3BRH3 (uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=4 SV=1)

HSP 1 Score: 291 bits (746), Expect = 3.04e-98
Identity = 161/190 (84.74%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MK   G+ E +NR KS FM   KH N+KRLGGK LSLEAFAN KSTTDYYNPALIKKQRE
Sbjct: 1   MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKALSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHV+KYKKLVKHQN  NERPSSSTVGLVEGEN TK ENQTNGR GKERNKG+PSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCGKERNKGVPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           Q LYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMN 190
           LL+TIGAS N
Sbjct: 181 LLETIGASTN 190

[Close]

BLAST of Csor.00g266040 vs. ExPASy TrEMBL
Match: A0A6J1KV89 (uncharacterized protein LOC111497895 OS=Cucurbita maxima OX=3661 GN=LOC111497895 PE=4 SV=1)

HSP 1 Score: 291 bits (745), Expect = 4.31e-98
Identity = 159/190 (83.68%), Postives = 170/190 (89.47%), Query Frame = 0


Query: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60
           MK R G+DE Q R KS F K  KHKNMKRLGGKG S +AFAN KSTTDYYNPA IKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFTKGNKHKNMKRLGGKGPSPQAFANAKSTTDYYNPAFIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120
           FYKNAKHV+KYKKLVKHQN+ NERPS+STVGLVEGEN  K EN+TNGRRG ERNKG+PSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSNSTVGLVEGENEMKFENRTNGRRGNERNKGVPSL 120

Query: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLKTIGASMN 190
           LL+TIGASMN
Sbjct: 181 LLETIGASMN 190

[Close]

BLAST of Csor.00g266040 vs. TAIR 10
Match: AT4G03180.1 (CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink). )

HSP 1 Score: 138.3 bits (347), Expect = 6.6e-33
Identity = 83/174 (47.70%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 15  KSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQREFYKNAKHVSKYKKL 74
           KS   + KK KNM+RLGG GLSL+ FAN+KS  + YNP+LIKKQ+EFYKNAK+VSK++K 
Sbjct: 14  KSKSAETKKRKNMRRLGGGGLSLQTFANMKSENNRYNPSLIKKQKEFYKNAKYVSKFRKS 73

Query: 75  VKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSLQELYERKHEEKEKA 134
           +K QN  ++  +  T  + + ++  K + ++N R G         +++LY++  EE E+ 
Sbjct: 74  LKQQNIPDKNETGETSKVGDDDDDDKRKGKSNKRIG---------VEDLYKQTREEMERV 133

Query: 135 RMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEHLLKTIGAS 189
           R E+EA+  AKKE +E A++RR   + KML++T+ GQPVMKYRIEHLL++I  S
Sbjct: 134 RKEREAMFQAKKEAKEEAESRRKEAKGKMLRKTRHGQPVMKYRIEHLLESIKKS 178

The following BLAST results are available for this feature:

BLAST of Csor.00g266040 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g266040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953215.1	2.60e-122	100.00	uncharacterized protein LOC111455827 [Cucurbita moschata] >KAG6575862.1 hypothet...	[more]
XP_023547647.1	1.24e-120	98.95	uncharacterized protein LOC111806525 [Cucurbita pepo subsp. pepo]	[more]
KAG7014397.1	8.78e-118	91.83	hypothetical protein SDJN02_24574 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022992472.1	1.33e-115	95.29	uncharacterized protein LOC111488792 [Cucurbita maxima]	[more]
XP_038876713.1	4.11e-101	87.77	uncharacterized protein LOC120069103 [Benincasa hispida]	[more]

BLAST of Csor.00g266040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GP14	1.26e-122	100.00	uncharacterized protein LOC111455827 OS=Cucurbita moschata OX=3662 GN=LOC1114558...	[more]
A0A6J1JPX8	6.42e-116	95.29	uncharacterized protein LOC111488792 OS=Cucurbita maxima OX=3661 GN=LOC111488792...	[more]
A0A6J1H9B9	3.70e-99	84.74	uncharacterized protein LOC111461241 OS=Cucurbita moschata OX=3662 GN=LOC1114612...	[more]
A0A1S3BRH3	3.04e-98	84.74	uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=...	[more]
A0A6J1KV89	4.31e-98	83.68	uncharacterized protein LOC111497895 OS=Cucurbita maxima OX=3661 GN=LOC111497895...	[more]

BLAST of Csor.00g266040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03180.1	6.6e-33	47.70	CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
IPR013730	Fyv7/TAP26	PFAM	PF08524	rRNA_processing	coord: 55..185 e-value: 1.3E-13 score: 51.2
IPR013730	Fyv7/TAP26	PANTHER	PTHR15657	UNCHARACTERIZED	coord: 1..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g266040.m01	Csor.00g266040.m01	mRNA