Csor.00g264680 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCCATTCCACGGCGGAGCTTTCTTCCTACGCGGCCTCTCAACGACGCGCTCCCTGTCTCACAGCCGGACTCCACACAGACGCTACGCCGAAGGCTCTCTTCGATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTTACTTCCTGGTCGTTTCATAGATCTAAATCGGTGTCTTCTTTGCGCGATCACACTGGCAAATCGCTCCGGAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTGCCTTCGCTCGAGATCTGGAAATGAACGATGAAGAAACAAAATCTCTTAGATCTAATTGCAGAGGTAGTTTCAGACATCTTTTCTATAAGGTTAGGTCTGAGTTCCGCAAACTGATTCGCTCCGATCGCGTCGGTCTTCCTCAAACTTTCAAATACGATTCGGTTAATTACTCGAAGAATTTCGATGACGGTGTGAAATCTTAGGTGTTTTACATTGTAATCGATTTTATGTGTTCGAAGGAATTCAGACTTTTGTGTTGAATAATATGCTCTGTTTCAAGCTAGATTCAGGAAAACTACAAGGATATAGAAAAAGAAGCTTCCGATTCCGCCAATGTAGGCCTCTGATTTTCGCTGTAATTGTTGCCGGTAATCGATTTGGCTAAATCAATCTGTTCATCGTGTTCATTGCTCCGTTCTTCGATCGATCGAAACAGAGAACGCACATTTGATTGCTCGCCGGTCCTGAGGTGAAGAAGAACAGAGAGATTTCAGAGATCTTCATCGCAAATTATGAGATCAAAGAGTTTGAAGTACATAAGAATTCTACTTGTTTTTGCAGATTTTGTTTTTCGTTTGTATAATCAACGTCAAATTTCATAGTATTTCTCCATTGTAATTCCAATACTACATTTTCTCTCTTTGCTTTTATTTATTTATTAAATTATAAATTTAACCTCTAAATTTTAATTTTATATTTAATAAATTTTTAAAATTCAAAAACATCACACTTAACCTTTCAATTTTATATATACAAAAACAATTTTTTTTATTAAATATAAAATTAAATTTTATAAATATCTAATAAATTTGAGAATTTTTAAAAAAATTTAAATAATTCAACAACATATTAAGACATAGGAAGTAATTTAATTTAATTTTTTTAGGTTTTAGGGCCAAGCTTATTCTACCAGCAAAGGTAATGTGTTTTAATGTTTTACTTATTAATTTATTTCTCAAATTAAATAAGTGTGTAATGACCCTGGGTCATTACAAATGGTATAAGAGTCAGACACCGGACGATGTGTCAGCATTCTCGCTATTCCTCGAAGGGGATAGACACAAGGCGGTGTGCCAGTAAGGACGCTGGGCACTATAGGGAAGTGGATTTAGGGGCGGTCCCACATCGATTGGAGGAAGGAAAGAGTATCAGCGAAGACACTGGCTCGCTGGCCCGAAAGGGATGGATTGTGATGTCCCATATGGGTTGATTGGGGAGTAGAACAAACCGTCATTTATAAGGGTGTGAAAACCTTCCCCTAGTAGATGCGTTTTAAGTCATTTATAAGGGTGTGAAAACCTTCCCCTAGTAGACGCGTTTTAACGCCTTGAGGGGTATCTTGCAAGGGAAAGCCCAAAGAAAACAATATCTGTTAAAGGTGGATCTGGGTCGTTACAAAGTGTGTGTTATGTTTATCACCATTTCAATTGTATGAAAAAATAAATAAGAGATTCAAATCAACAAATTTAAAATTCAAAATTAAAATGATTTATTTTTTGATTCCTCAGGTAAATTATACCTAAAAAAATTTAATAATATGACATCGAAGCAAGTTAACGGTGAATATAAACCAACATATTACGGGAATATATTTGTACCAAAATTTGAAAAATAATCTTTTTTAGTAAAATAATAATGAATACAAATAAAGAAAAAAAATTCAATTATTAATTAGTATATGTAGTTCAAAGTCTACTTTCATTTAAAATTTAAAGGTAAAATGTCGTGATTTGTTGAGGTTCGTGAGATCTCATATCGATTACAGAGAAAAAAATGAAACATCATTTTATAATGACTGACGACAATAACAGGTCAAAGCAGACAATATTTGCTAGTTGAACTACGGTAAAAATTAGTCATAAAAAAAAAAAAAAAATTTAATTCTAAATATCCTTGCATTTATCTTAGTTAATAATTACTTGAATTTATTTTATTAATTATAAATTATCACCGACCTCCATGAATTATTATATACATTTTTTTAGTAAAAACCTCTAAATTACTAGAGTTAAAAAAAAAATAGTTTAGTAATTAAAGTTAAATATAAATAATTGACTAAAAAATTATTTATGTTATAATATTGAAATTATTTATTTTCCCAAAAAAGTATCATATAATTGTGGAAAAAAAAAGTGGTGTCGGTGTGAGAATTAATGCATAGATCTAGAGAATGGCAAGAAATTGATGAATAATTAAGATCCCTTCGTAGTTCATGCTCTGTCCAATCTCCTGTTGACACGTCACATATTATTGTCGGTCACATAACTCTCCTACAATATTGGAACCATATCTTATTTATTTCTATTATTCTTTTAAATATTATTTCACAAAAAAAAAAAAAAAAAAAACGTGACTCAAACTCGATCTCTCTATATATATATTTTTACGATTATTTTTGAAGTTTCAAAAACTAATAAAATTTGTTCGGTTCGAAAATTATTTATTTTTTTAAAATATATTTTTAAGTAATTTGGATATCAAAATCTCGTGTAATATAATAATTTTTAAGTAATTTATTTGGTTAATTAAAAAATATATAGAGAGAGAGGCTAAATTTCTATTAAATAATTTTTTTATTAAAAAAATGCACTAGAATTTATTAATTTTGGCAAATTTTATATGTGGTTTTACCATTTTGCCCCTTGAAAGTTGGAGCTTACTGGGCCAGGGTCGTTCGTATTCGAACATCGGGATAAATGTCGCTCCGGCGGCCTCTTCCGTCGTCGCTAAAACTGCTCTATCTGATACTCACGTTCAAAGTCAGAGCTCCAGTTCTGTTCCTGGTAGTGGTATGTATAATTGGAACTCTCTTTTTTTTTTTTTGTACTTCATTTCTTGTTCATCATGCAATTAGTTTGTATTGGAATAACTTGCAACGTCAGTTTGATTGGATTTTTTGCGATTGGTTCGTGATTAACTGTAGTCATCGAGTTTTGTGTTGAAAATTTGGAAAAAAAAAAACGATTTATTTTGTGATTGTATTCGTTTTAAGGATGGTCCGATTTTGCCAAAAATGTCTCTGGTGAGTGGGGTGGATATGGTGCGTATTTTTCTTCTGAGGGAACGCCAATTGAACTTCCAGAATCCGCTGTTCCAGATGCTTATAGAGAATGGGAGGTTAAGGTTTTCGACTGGCAGACTCAGTGCCCCACTCTTGCAGGACCAGAACAGCCCTCTTTCATGTACAAGACAATAAAACTACTCCCCACAGTGGGGTGTGAAGCCGATGCTGCAACACGTTACAGCGTTGATGAGAGAAATTTCGGAAGTGGTGCAAATGAAGAAGTAAATGCATTTGCATATCAACGTAGTGGATGTTATGTAGCTGTCCAGCCGATTGAGGATGGAAGTTCTAACAAGTTATTGGAGTTGGAGCATTGCCTGGTAAATCCTCAAGATCGTGAATCTCGTGCGAGGATTGTTCAGGTTGTTCGAGTTGAAGGCACACAGCTAGTTTTGCAGAATATCCGAGTTTTCTGCGAGCAGTGGTACGGGCCATTCAGAAATGGAGAACAGCTTGGTGGATGCGCCATAGGAGCTCAGCATTTGCTTCTACAGCTGCCTTGAAAGCTTCTGAGGTTGTTGGTACATGGCAGGGTCCTGTCTCTGTTGCCCGCCTAGATGGCTCTCAGATTGTGAGTTATACGACCTTCCTTTGCTTTTTAGACCATCTTTTACTATTATTACATGATGATTTAGAACTTTTGTTGTACTTTTTCTTGCTATCTTTCAATCTGATAAACATGAAATTAGAATTTATAATCTGATACTAGTAATGCACAGAACATTGCAAAATATAACTCGAATATAACTCGATTTAAATCTATAGTGTCATTATAACCATGATAAACTTACTTTCACAGGCACAATATAACTCGATTTCCTGTTGA ATGACTTCCATTCCACGGCGGAGCTTTCTTCCTACGCGGCCTCTCAACGACGCGCTCCCTGTCTCACAGCCGGACTCCACACAGACGCTACGCCGAAGGCTCTCTTCGATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTTACTTCCTGGTCGTTTCATAGATCTAAATCGGTGTCTTCTTTGCGCGATCACACTGGCAAATCGCTCCGGAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTGCCTTCGCTCGAGATCTGGAAATGAACGATGAAGAAACAAAATCTCTTAGATCTAATTGCAGAGGTAGTTTCAGACATCTTTTCTATAAGGGTCGTTCGTATTCGAACATCGGGATAAATGTCGCTCCGGCGGCCTCTTCCGTCGTCGCTAAAACTGCTCTATCTGATACTCACGTTCAAAGTCAGAGCTCCAGTTCTGTTCCTGGTAGTGATGCTTATAGAGAATGGGAGGTTAAGGTTTTCGACTGGCAGACTCAGTGCCCCACTCTTGCAGGACCAGAACAGCCCTCTTTCATGTACAAGACAATAAAACTACTCCCCACAGTGGGGTGTGAAGCCGATGCTGCAACACGTTACAGCGTTGATGAGAGAAATTTCGGAAGTGGTGCAAATGAAGAAGTAAATGCATTTGCATATCAACGTAGTGGATGTTATGTAGCTGTCCAGCCGATTGAGGATGGAAGTTCTAACAAGTTATTGGAGTTGGAGCATTGCCTGGTAAATCCTCAAGATCGTGAATCTCGTGCGAGGATTGTTCAGAAATGGAGAACAGCTTGGTGGATGCGCCATAGGAGCTCAGCATTTGCTTCTACAGCTGCCTTGAAAGCTTCTGAGGTTGTTGGTACATGGCAGGGTCCTGTCTCTGTTGCCCGCCTAGATGGCTCTCAGATTGCACAATATAACTCGATTTCCTGTTGA ATGACTTCCATTCCACGGCGGAGCTTTCTTCCTACGCGGCCTCTCAACGACGCGCTCCCTGTCTCACAGCCGGACTCCACACAGACGCTACGCCGAAGGCTCTCTTCGATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTTACTTCCTGGTCGTTTCATAGATCTAAATCGGTGTCTTCTTTGCGCGATCACACTGGCAAATCGCTCCGGAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTGCCTTCGCTCGAGATCTGGAAATGAACGATGAAGAAACAAAATCTCTTAGATCTAATTGCAGAGGTAGTTTCAGACATCTTTTCTATAAGGGTCGTTCGTATTCGAACATCGGGATAAATGTCGCTCCGGCGGCCTCTTCCGTCGTCGCTAAAACTGCTCTATCTGATACTCACGTTCAAAGTCAGAGCTCCAGTTCTGTTCCTGGTAGTGATGCTTATAGAGAATGGGAGGTTAAGGTTTTCGACTGGCAGACTCAGTGCCCCACTCTTGCAGGACCAGAACAGCCCTCTTTCATGTACAAGACAATAAAACTACTCCCCACAGTGGGGTGTGAAGCCGATGCTGCAACACGTTACAGCGTTGATGAGAGAAATTTCGGAAGTGGTGCAAATGAAGAAGTAAATGCATTTGCATATCAACGTAGTGGATGTTATGTAGCTGTCCAGCCGATTGAGGATGGAAGTTCTAACAAGTTATTGGAGTTGGAGCATTGCCTGGTAAATCCTCAAGATCGTGAATCTCGTGCGAGGATTGTTCAGAAATGGAGAACAGCTTGGTGGATGCGCCATAGGAGCTCAGCATTTGCTTCTACAGCTGCCTTGAAAGCTTCTGAGGTTGTTGGTACATGGCAGGGTCCTGTCTCTGTTGCCCGCCTAGATGGCTCTCAGATTGCACAATATAACTCGATTTCCTGTTGA MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKGRSYSNIGINVAPAASSVVAKTALSDTHVQSQSSSSVPGSDAYREWEVKVFDWQTQCPTLAGPEQPSFMYKTIKLLPTVGCEADAATRYSVDERNFGSGANEEVNAFAYQRSGCYVAVQPIEDGSSNKLLELEHCLVNPQDRESRARIVQKWRTAWWMRHRSSAFASTAALKASEVVGTWQGPVSVARLDGSQIAQYNSISC Homology
BLAST of Csor.00g264680 vs. NCBI nr
Match: KAG6589060.1 (hypothetical protein SDJN03_17625, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 639 bits (1648), Expect = 3.52e-231 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0
BLAST of Csor.00g264680 vs. NCBI nr
Match: XP_022928235.1 (uncharacterized protein LOC111435129 [Cucurbita moschata]) HSP 1 Score: 494 bits (1272), Expect = 1.40e-169 Identity = 301/529 (56.90%), Postives = 303/529 (57.28%), Query Frame = 0
BLAST of Csor.00g264680 vs. NCBI nr
Match: KAG7022774.1 (hypothetical protein SDJN02_16510, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 325 bits (833), Expect = 3.92e-106 Identity = 186/261 (71.26%), Postives = 188/261 (72.03%), Query Frame = 0
BLAST of Csor.00g264680 vs. NCBI nr
Match: VVA26607.1 (PREDICTED: MTR_1g102880 [Prunus dulcis]) HSP 1 Score: 302 bits (773), Expect = 1.08e-95 Identity = 192/413 (46.49%), Postives = 231/413 (55.93%), Query Frame = 0
BLAST of Csor.00g264680 vs. NCBI nr
Match: ONH92561.1 (hypothetical protein PRUPE_8G180900 [Prunus persica]) HSP 1 Score: 301 bits (772), Expect = 1.53e-95 Identity = 192/413 (46.49%), Postives = 230/413 (55.69%), Query Frame = 0
BLAST of Csor.00g264680 vs. ExPASy TrEMBL
Match: A0A6J1ER56 (uncharacterized protein LOC111435129 OS=Cucurbita moschata OX=3662 GN=LOC111435129 PE=4 SV=1) HSP 1 Score: 494 bits (1272), Expect = 6.77e-170 Identity = 301/529 (56.90%), Postives = 303/529 (57.28%), Query Frame = 0
BLAST of Csor.00g264680 vs. ExPASy TrEMBL
Match: A0A5E4FFE5 (PREDICTED: MTR_1g102880 OS=Prunus dulcis OX=3755 GN=ALMOND_2B031508 PE=4 SV=1) HSP 1 Score: 302 bits (773), Expect = 5.24e-96 Identity = 192/413 (46.49%), Postives = 231/413 (55.93%), Query Frame = 0
BLAST of Csor.00g264680 vs. ExPASy TrEMBL
Match: A0A251MZN5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G180900 PE=4 SV=1) HSP 1 Score: 301 bits (772), Expect = 7.41e-96 Identity = 192/413 (46.49%), Postives = 230/413 (55.69%), Query Frame = 0
BLAST of Csor.00g264680 vs. ExPASy TrEMBL
Match: A0A6J1C6D1 (uncharacterized protein LOC111007798 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007798 PE=4 SV=1) HSP 1 Score: 276 bits (706), Expect = 2.11e-88 Identity = 168/284 (59.15%), Postives = 182/284 (64.08%), Query Frame = 0
BLAST of Csor.00g264680 vs. ExPASy TrEMBL
Match: A0A5N5F2Q5 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_036549 PE=4 SV=1) HSP 1 Score: 282 bits (721), Expect = 3.24e-88 Identity = 181/414 (43.72%), Postives = 224/414 (54.11%), Query Frame = 0
BLAST of Csor.00g264680 vs. TAIR 10
Match: AT4G38225.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 151.8 bits (382), Expect = 9.6e-37 Identity = 84/168 (50.00%), Postives = 103/168 (61.31%), Query Frame = 0
BLAST of Csor.00g264680 vs. TAIR 10
Match: AT4G38225.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 151.8 bits (382), Expect = 9.6e-37 Identity = 84/168 (50.00%), Postives = 103/168 (61.31%), Query Frame = 0
BLAST of Csor.00g264680 vs. TAIR 10
Match: AT4G38225.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 151.8 bits (382), Expect = 9.6e-37 Identity = 84/168 (50.00%), Postives = 103/168 (61.31%), Query Frame = 0
BLAST of Csor.00g264680 vs. TAIR 10
Match: AT4G35320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 100.5 bits (249), Expect = 2.5e-21 Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 0
BLAST of Csor.00g264680 vs. TAIR 10
Match: AT2G17300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 81.3 bits (199), Expect = 1.6e-15 Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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