Csor.00g263890 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTTCGTTTACCAAGGATAGTTCATGCTAGGCAAAGCCTTCAACGATCTTCATCAACCGTAAATGGAGCATCTCCAAGGGCTGTGGATGTTCCAAAAGGGTACTTTACAGTTTATGTTGGTGAAGAACAAAAGAAGCGTTTTTTCATTCCATTATCTTACTTCAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGTAGAAGAAGAATTTGGATATGACCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGATTATTTCCTCGATCTCACTTGTAGCTTGAATGGCTCATGA ATGGGTTTTCGTTTACCAAGGATAGTTCATGCTAGGCAAAGCCTTCAACGATCTTCATCAACCGTAAATGGAGCATCTCCAAGGGCTGTGGATGTTCCAAAAGGGTACTTTACAGTTTATGTTGGTGAAGAACAAAAGAAGCGTTTTTTCATTCCATTATCTTACTTCAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGTAGAAGAAGAATTTGGATATGACCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGATTATTTCCTCGATCTCACTTGTAGCTTGAATGGCTCATGA ATGGGTTTTCGTTTACCAAGGATAGTTCATGCTAGGCAAAGCCTTCAACGATCTTCATCAACCGTAAATGGAGCATCTCCAAGGGCTGTGGATGTTCCAAAAGGGTACTTTACAGTTTATGTTGGTGAAGAACAAAAGAAGCGTTTTTTCATTCCATTATCTTACTTCAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGTAGAAGAAGAATTTGGATATGACCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGATTATTTCCTCGATCTCACTTGTAGCTTGAATGGCTCATGA MGFRLPRIVHARQSLQRSSSTVNGASPRAVDVPKGYFTVYVGEEQKKRFFIPLSYFNQPSFQDLLSQVEEEFGYDHPMGGITIPCSEDYFLDLTCSLNGS Homology
BLAST of Csor.00g263890 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.6e-27 Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 0
BLAST of Csor.00g263890 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 6.8e-26 Identity = 59/98 (60.20%), Postives = 71/98 (72.45%), Query Frame = 0
BLAST of Csor.00g263890 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 6.8e-26 Identity = 60/98 (61.22%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of Csor.00g263890 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.2e-25 Identity = 58/98 (59.18%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of Csor.00g263890 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.6e-25 Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 0
BLAST of Csor.00g263890 vs. NCBI nr
Match: KAG6588982.1 (hypothetical protein SDJN03_17547, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207 bits (528), Expect = 1.28e-67 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Csor.00g263890 vs. NCBI nr
Match: XP_022989150.1 (auxin-induced protein 15A-like [Cucurbita maxima]) HSP 1 Score: 177 bits (449), Expect = 1.44e-55 Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of Csor.00g263890 vs. NCBI nr
Match: XP_011658575.1 (auxin-induced protein 15A [Cucumis sativus] >XP_011658577.2 auxin-induced protein 15A [Cucumis sativus]) HSP 1 Score: 176 bits (447), Expect = 2.91e-55 Identity = 86/100 (86.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Csor.00g263890 vs. NCBI nr
Match: XP_022135743.1 (auxin-induced protein 15A-like [Momordica charantia]) HSP 1 Score: 176 bits (447), Expect = 2.91e-55 Identity = 86/100 (86.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Csor.00g263890 vs. NCBI nr
Match: XP_038887254.1 (auxin-induced protein 15A-like [Benincasa hispida]) HSP 1 Score: 176 bits (447), Expect = 2.91e-55 Identity = 87/100 (87.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of Csor.00g263890 vs. ExPASy TrEMBL
Match: A0A6J1JLL2 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111486308 PE=3 SV=1) HSP 1 Score: 177 bits (449), Expect = 6.98e-56 Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of Csor.00g263890 vs. ExPASy TrEMBL
Match: A0A0A0K4J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=3 SV=1) HSP 1 Score: 176 bits (447), Expect = 1.41e-55 Identity = 86/100 (86.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Csor.00g263890 vs. ExPASy TrEMBL
Match: A0A6J1C5R3 (auxin-induced protein 15A-like OS=Momordica charantia OX=3673 GN=LOC111007633 PE=3 SV=1) HSP 1 Score: 176 bits (447), Expect = 1.41e-55 Identity = 86/100 (86.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Csor.00g263890 vs. ExPASy TrEMBL
Match: A0A6J1GJW5 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=3 SV=1) HSP 1 Score: 176 bits (446), Expect = 2.00e-55 Identity = 87/100 (87.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Csor.00g263890 vs. ExPASy TrEMBL
Match: A0A6J1GL91 (auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE=3 SV=1) HSP 1 Score: 176 bits (445), Expect = 2.84e-55 Identity = 87/100 (87.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Csor.00g263890 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 121.3 bits (303), Expect = 4.4e-28 Identity = 53/99 (53.54%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of Csor.00g263890 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 108.2 bits (269), Expect = 3.8e-24 Identity = 50/90 (55.56%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Csor.00g263890 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 107.5 bits (267), Expect = 6.5e-24 Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of Csor.00g263890 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 106.7 bits (265), Expect = 1.1e-23 Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 0
BLAST of Csor.00g263890 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23 Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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