Csor.00g263280 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g263280
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type domain-containing protein
Location	Csor_Chr11: 12452915 .. 12456018 (-)
RNA-Seq Expression	Csor.00g263280
Synteny	Csor.00g263280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAAGAGGGATCGACAACAAGCGCTTCAGAGCCAGAACGAGAAACGGTTGGATCGAAACCGCTCGAAATCGGAAATGATGGCGCGGGTTACTTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGACGAAGAAGCGCTTCTAATCGCGAGCCTCGTCGTCGAAGACACGCCGGACAGAGAGTTCCGGCAGAAGAAACGATTAGTTCTCCAGTGCAAGAGTCCTCTGTCTGGTTCGAGAAGGTAGACTATATATTTATCGATTCTGATTCTTCTCTCGGTTCCTCCATATCTATGCGCAGATTCTAGGGTTTCTATTCGGATTGATTGGAGTTGTTTTGTCTGAAATTTGAGTTCATTTCTTGTGTGCTTTTTGTAGGAAACGAAGGGCTTCGGCAAACTTAATCTCGATTCCGGCGGCTGTTCTTGACCTCGAGGAAGAAGAATCGACTGTGAAAGGTAGATTTCCATTTCCATTGCTTGGAGGATTCGGATTTCCATTTGTCCCTAATTTCTAGAAAATTCTTGGAGGATTTGGTTACCAAATTTCTAATTAAGACTGAGATCATGAGAACTCGGTGTTTATGATCCATTTAAATTTGTATCCGTCTCGGTTTCCTAATAAACTTTGATCTGCACTTGATTAAATGTAGTGTTGTTTGTTTTTTGAATTGTGCAAATGTGATGTCCCACATTGACCGGGGAGTTGAACAAACCACCATTTGTAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAATCCTCGAAGGGAAGCCCCAAAGAGAAAATCCAAAGAAGACAATATTTGCTAGCGGTGGATCTGAGTCGTTACAAATGGTATCAGAGCTCCAAGAGTGTGGAAACCTTCCCTTACAAATAGTACCAGAGCCCCAAAAGGGTGTGGAAACCTTCCTCTAGCTGATGCGTTTTAAAGTCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATTTGCTAGCGGTGGATTTGGGTCATTACAATGGTATCAGAGCCAAACATCGGACAATGTGTCACCCTTCTGGCCTTCGGTAGACACGAGGTGGTGTGCCAGTAAGGACACTGGACCCCAAAAGGGGGTGGATTTAGGACTGGTCCCACATCGATTAGAGGAAGGAAAGAGTGCCAGCGAGGACGCTGGGTCCCGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCTCCTAGCATACGGCTTTTAATAAAGCCTTTGAGGGGAAGCTAGCGGTGGGTCTAGGTCGTTACAGCAAAATTTATTGTACTTCTAATGTCATTACATGCCATAGTCTTCAATTCAAAGTTTTGAAAATTGGGTCATAACAGTTCGATTAGTGTTTCGTTGTTGAAAATTAATCTTAAAACCACCATTTTCGAGTTTCTTTCATTCAAGTAGTAATTGTTGTAGCAAATGATATGAACAGATGATGCTCCAAAACAAGATCAAGAAACAGCAGAGGCTGACCCAAAGAAAAGTGATTCATTGGATGAACAGAAAGCTGGTGCTTCTTCTTCTTCTTCAACATGTTCAACTCTTCCATGCATGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTGTAAGGATACTCTCTCTCACAACTTTCAACCTTTTAGCTTTTTTGGATACTTATCTTATTCCTAATTGCTTTGTTTTCAATTCTTCTTCATAGATTTGCTTGGAAATTTGCTTTGAACCTAGTACTACACCTTGTGGCCATAGGTAACTCCCTCTAGACTGACTCATTGTTCTTACACTTGAATCTTATTTTTGGTTCTTTTGAGTTTGATTGAACCCTAAATGTTGAGATGCTCTGTTCTGAATACTAAATTGTATATGAAAGTTGTTTGAGTTGTGAAGTAATTTTTTAGGTTAAATTATGAATTGAGAATTCCTCTCGACTTTTAATGCTAAATCCATAAATTTTAAAGAATTCTCTAACGAGTCTCCGATCTTTTAAATTTGTGTTTATTGATCCCTAAAAGTTGAAAAGTAACTAATATGTCATTGACCTTTATGACCTTATTAAGTTTTGAGGACGTGTAAAAGTCATAAAATTGAAAGTTTAAGATGGTAAGATCTCACTCGGTTGGAGAGGAGAACGAAACATCCCTTATAAGGGTGTAGAGACTTCTCTCTAATAGACGCATTTTAAAACCTTGTGGAGAAAACCCAGAAGAGAAAACCCAAAAAAAACAATATCCGCTAGCGGTGAGCTTGGACCCTTACAAAAATAAACACACGGTAATGGTAAACTGCTTACTGTACCATTCTAAGTTGTCTTCTTTTCTGCTTGAATATTGTAGTTTCTGCAAGAAATGTCTGAGATCTGCAGCTGACAAATGTGGAAAAAAGTGCCCTAAATGCAGGCAGCTAATAAGGTTGAATTTGCTACTCCAAAGTTCCATGAAACCAAATCATTTGGATCATTTTATTTTCAGACATTAATGCTTACATGTCTCTTGTGTTGTTGATCCTAAATTTGCAGCAATGGGAGATCTTGCACTGTAAATACAGTTCTTTGGAACACCATACAACTTCTTTTTCCTCGGGAGGTTGAAGCAAGAAAGGAAGCAAAAGGAGGGTGTAGTAGCCATGACAAGAAGATTCAAGACACAGAAAAGGCCTTCTATAGTAGTTTGTCGAACCATAACATGCGAGCAACCCGAACATCGAGTAGACATGGTAGTACTAGCTCAAGAAGAAGGGAAATAATGGGTCGAGATGAGGATGGCGAATCGAACGGTAGAATGACGCAGCAAGCTCCATTTTCAAATGCTGTAAGCAGCAGAGTTCAGTCCAGAATGCACCATCGAAGTGTTCGGCCGGTGAGGAGGACGACTCGAGATGCAGATGTGAGTAGGAGGAGAGGTACGCCAGACCAAGATCAGGAGGCTGCTTTGGCACTGAGATTGCGGAGGGAAGAGTTTATGGAGGCTTTCAGAGATAATCAAGTGCAAACCAGAAGCTCAGTGTCCTTGGCTAGAGCTAATCTTAGAGCATTGGCTGCTAGGGTTGCCATTAACCGCTAG

mRNA sequence

ATGGTGCAAGAGGGATCGACAACAAGCGCTTCAGAGCCAGAACGAGAAACGGTTGGATCGAAACCGCTCGAAATCGGAAATGATGGCGCGGGTTACTTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGACGAAGAAGCGCTTCTAATCGCGAGCCTCGTCGTCGAAGACACGCCGGACAGAGAGTTCCGGCAGAAGAAACGATTAGTTCTCCAGTGCAAGAGTCCTCTGTCTGGTTCGAGAAGGAAACGAAGGGCTTCGGCAAACTTAATCTCGATTCCGGCGGCTGTTCTTGACCTCGAGGAAGAAGAATCGACTGTGAAAGATGATGCTCCAAAACAAGATCAAGAAACAGCAGAGGCTGACCCAAAGAAAAGTGATTCATTGGATGAACAGAAAGCTGGTGCTTCTTCTTCTTCTTCAACATGTTCAACTCTTCCATGCATGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTATTTGCTTGGAAATTTGCTTTGAACCTAGTACTACACCTTGTGGCCATAGTTTCTGCAAGAAATGTCTGAGATCTGCAGCTGACAAATGTGGAAAAAAGTGCCCTAAATGCAGGCAGCTAATAAGCAATGGGAGATCTTGCACTGTAAATACAGTTCTTTGGAACACCATACAACTTCTTTTTCCTCGGGAGGTTGAAGCAAGAAAGGAAGCAAAAGGAGGGTGTAGTAGCCATGACAAGAAGATTCAAGACACAGAAAAGGCCTTCTATAGTAGTTTGTCGAACCATAACATGCGAGCAACCCGAACATCGAGTAGACATGGTAGTACTAGCTCAAGAAGAAGGGAAATAATGGGTCGAGATGAGGATGGCGAATCGAACGGTAGAATGACGCAGCAAGCTCCATTTTCAAATGCTGTAAGCAGCAGAGTTCAGTCCAGAATGCACCATCGAAGTGTTCGGCCGGTGAGGAGGACGACTCGAGATGCAGATGTGAGTAGGAGGAGAGGTACGCCAGACCAAGATCAGGAGGCTGCTTTGGCACTGAGATTGCGGAGGGAAGAGTTTATGGAGGCTTTCAGAGATAATCAAGTGCAAACCAGAAGCTCAGTGTCCTTGGCTAGAGCTAATCTTAGAGCATTGGCTGCTAGGGTTGCCATTAACCGCTAG

Coding sequence (CDS)

ATGGTGCAAGAGGGATCGACAACAAGCGCTTCAGAGCCAGAACGAGAAACGGTTGGATCGAAACCGCTCGAAATCGGAAATGATGGCGCGGGTTACTTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGACGAAGAAGCGCTTCTAATCGCGAGCCTCGTCGTCGAAGACACGCCGGACAGAGAGTTCCGGCAGAAGAAACGATTAGTTCTCCAGTGCAAGAGTCCTCTGTCTGGTTCGAGAAGGAAACGAAGGGCTTCGGCAAACTTAATCTCGATTCCGGCGGCTGTTCTTGACCTCGAGGAAGAAGAATCGACTGTGAAAGATGATGCTCCAAAACAAGATCAAGAAACAGCAGAGGCTGACCCAAAGAAAAGTGATTCATTGGATGAACAGAAAGCTGGTGCTTCTTCTTCTTCTTCAACATGTTCAACTCTTCCATGCATGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTATTTGCTTGGAAATTTGCTTTGAACCTAGTACTACACCTTGTGGCCATAGTTTCTGCAAGAAATGTCTGAGATCTGCAGCTGACAAATGTGGAAAAAAGTGCCCTAAATGCAGGCAGCTAATAAGCAATGGGAGATCTTGCACTGTAAATACAGTTCTTTGGAACACCATACAACTTCTTTTTCCTCGGGAGGTTGAAGCAAGAAAGGAAGCAAAAGGAGGGTGTAGTAGCCATGACAAGAAGATTCAAGACACAGAAAAGGCCTTCTATAGTAGTTTGTCGAACCATAACATGCGAGCAACCCGAACATCGAGTAGACATGGTAGTACTAGCTCAAGAAGAAGGGAAATAATGGGTCGAGATGAGGATGGCGAATCGAACGGTAGAATGACGCAGCAAGCTCCATTTTCAAATGCTGTAAGCAGCAGAGTTCAGTCCAGAATGCACCATCGAAGTGTTCGGCCGGTGAGGAGGACGACTCGAGATGCAGATGTGAGTAGGAGGAGAGGTACGCCAGACCAAGATCAGGAGGCTGCTTTGGCACTGAGATTGCGGAGGGAAGAGTTTATGGAGGCTTTCAGAGATAATCAAGTGCAAACCAGAAGCTCAGTGTCCTTGGCTAGAGCTAATCTTAGAGCATTGGCTGCTAGGGTTGCCATTAACCGCTAG

Protein sequence

MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVEDTPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQETAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSHDKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSNAVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQVQTRSSVSLARANLRALAARVAINR

Homology

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BLAST of Csor.00g263280 vs. ExPASy Swiss-Prot
Match: Q6PJ69 (Tripartite motif-containing protein 65 OS=Homo sapiens OX=9606 GN=TRIM65 PE=1 SV=3)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-10
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 155 LREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTV 214
           L E+L+CAICL +  +P T PCGH+FC  C+R   D+CGK CP+CR+   +G     N  
Sbjct: 6   LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECREPFPDGAELRRNVA 65

Query: 215 LWNTIQLL 223
           L   ++++
Sbjct: 66  LSGVLEVV 73

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BLAST of Csor.00g263280 vs. ExPASy Swiss-Prot
Match: Q8IYW5 (E3 ubiquitin-protein ligase RNF168 OS=Homo sapiens OX=9606 GN=RNF168 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-10
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 158 ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLISN------GRSCTV 217
           E  C IC+EI  EP T PC H+ CK C +S  +K    CP CR+ +S+       R+  V
Sbjct: 13  ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLV 72

Query: 218 NTVLWNTIQLLFPREVEAR 231
           N  LW  IQ  +PRE + R
Sbjct: 73  NVELWTIIQKHYPRECKLR 91

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BLAST of Csor.00g263280 vs. ExPASy Swiss-Prot
Match: Q7T308 (E3 ubiquitin-protein ligase rnf168 OS=Danio rerio OX=7955 GN=rnf168 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.4e-10
Identity = 36/81 (44.44%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 156 REELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLIS-----NGRSCT 215
           R +  C +CLEI  EP T PC H+FCK C     DK    CP CR+ +S     N R+ T
Sbjct: 21  RSDCVCPVCLEIFLEPVTLPCMHTFCKPCFLETVDKSNMCCPLCRKRVSTWARLNSRNKT 80

Query: 216 -VNTVLWNTIQLLFPREVEAR 231
            VN  LW  IQ  FP + E R
Sbjct: 81  LVNMELWRRIQDAFPSQCERR 101

[Close]

BLAST of Csor.00g263280 vs. ExPASy Swiss-Prot
Match: Q0IIM1 (E3 ubiquitin-protein ligase RNF168 OS=Bos taurus OX=9913 GN=RNF168 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 5.3e-10
Identity = 35/79 (44.30%), Postives = 44/79 (55.70%), Query Frame = 0


Query: 158 ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLISNG---RSCT---V 217
           E  C IC+EI FEP T PC H+ CK C  S  +K    CP CR+ +S+    RS T   V
Sbjct: 13  ECQCQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWARYRSRTNSLV 72

Query: 218 NTVLWNTIQLLFPREVEAR 231
           N  LW  IQ  +P+E + R
Sbjct: 73  NMELWEIIQKHYPKECKLR 91

[Close]

BLAST of Csor.00g263280 vs. ExPASy Swiss-Prot
Match: Q80XJ2 (E3 ubiquitin-protein ligase RNF168 OS=Mus musculus OX=10090 GN=Rnf168 PE=1 SV=3)

HSP 1 Score: 64.3 bits (155), Expect = 3.4e-09
Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 158 ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLISN------GRSCTV 217
           E  C IC+EI  EP T PC H+ C  C +S  +K    CP CR+ +S+       R+  V
Sbjct: 13  ECQCGICMEILLEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTRYHTRRNSLV 72

Query: 218 NTVLWNTIQLLFPREVEAR 231
           NT LW  IQ  + +E + R
Sbjct: 73  NTDLWEIIQKHYAKECKLR 91

[Close]

BLAST of Csor.00g263280 vs. NCBI nr
Match: KAG6588921.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 724 bits (1868), Expect = 1.76e-262
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60
           MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED
Sbjct: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60

Query: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120
           TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE
Sbjct: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120

Query: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180
           TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF
Sbjct: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180

Query: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH 240
           CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH
Sbjct: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH 240

Query: 241 DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSN 300
           DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSN
Sbjct: 241 DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSN 300

Query: 301 AVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV 360
           AVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV
Sbjct: 301 AVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV 360

Query: 361 QTRSSVSLARANLRALAARVAINR 384
           QTRSSVSLARANLRALAARVAINR
Sbjct: 361 QTRSSVSLARANLRALAARVAINR 384

[Close]

BLAST of Csor.00g263280 vs. NCBI nr
Match: XP_022928318.1 (LON peptidase N-terminal domain and RING finger protein 3-like [Cucurbita moschata])

HSP 1 Score: 706 bits (1821), Expect = 2.97e-255
Identity = 374/378 (98.94%), Postives = 375/378 (99.21%), Query Frame = 0


Query: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60
           MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED
Sbjct: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60

Query: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120
           TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE
Sbjct: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120

Query: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180
           TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF
Sbjct: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180

Query: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH 240
           CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFP+EVEARKEAKGGCSSH
Sbjct: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPQEVEARKEAKGGCSSH 240

Query: 241 DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSN 300
           DKKIQDTEKAFYSS SNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRM QQAPFSN
Sbjct: 241 DKKIQDTEKAFYSSSSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMMQQAPFSN 300

Query: 301 AVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV 360
           AVSSRVQSRMHHRSVRPVR TTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV
Sbjct: 301 AVSSRVQSRMHHRSVRPVRTTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV 360

Query: 361 QTRSSVSLARANLRALAA 378
           QTRSSVSLARANLRALAA
Sbjct: 361 QTRSSVSLARANLRALAA 378

[Close]

BLAST of Csor.00g263280 vs. NCBI nr
Match: XP_023531716.1 (E3 ubiquitin-protein ligase RNF168-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 675 bits (1741), Expect = 4.94e-243
Identity = 369/390 (94.62%), Postives = 373/390 (95.64%), Query Frame = 0


Query: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60
           MVQEGSTTSASEPERET+GSKPLEIGNDG  YFSPRFKSAAAMAGWDEEALLIASLVVED
Sbjct: 1   MVQEGSTTSASEPERETIGSKPLEIGNDGESYFSPRFKSAAAMAGWDEEALLIASLVVED 60

Query: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120
           TPDREFRQKKRLVLQCKSPLSGSRRKRR SANLISIPAAVLDLEEEESTVKDDAPKQ+QE
Sbjct: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRDSANLISIPAAVLDLEEEESTVKDDAPKQEQE 120

Query: 121 TAEADPKKSDSLDEQKAGASSSSS---TCSTLPCMDKLREELSCAICLEICFEPSTTPCG 180
           TAEADPKKSDSLDEQKAGASSSSS   TCSTLPCMDKLREELSCAICLEICFEPSTTPCG
Sbjct: 121 TAEADPKKSDSLDEQKAGASSSSSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCG 180

Query: 181 HSFCKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGC 240
           HSFCKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFP+EVEARKEAKGGC
Sbjct: 181 HSFCKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPQEVEARKEAKGGC 240

Query: 241 SSHDKKIQDTEKAFY-SSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQA 300
           SSHDKKIQDTEKA Y SSL NHN RATRTSSRHGS+ SRRREI GRDED ESNGRM QQA
Sbjct: 241 SSHDKKIQDTEKAIYNSSLQNHNTRATRTSSRHGSSISRRREITGRDEDDESNGRMMQQA 300

Query: 301 PFSNAVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFR 360
           PFSNAVSSRVQSRMHHRSVRPVR TTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFR
Sbjct: 301 PFSNAVSSRVQSRMHHRSVRPVRTTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFR 360

Query: 361 DN-QVQTRSS-VSLARANLRALAARVAINR 384
           DN QVQTRSS VSLARANLRALAARVAINR
Sbjct: 361 DNNQVQTRSSSVSLARANLRALAARVAINR 390

[Close]

BLAST of Csor.00g263280 vs. NCBI nr
Match: KAG7022688.1 (hypothetical protein SDJN02_16422, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 652 bits (1682), Expect = 1.57e-234
Identity = 359/385 (93.25%), Postives = 359/385 (93.25%), Query Frame = 0


Query: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60
           MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED
Sbjct: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60

Query: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120
           TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE
Sbjct: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120

Query: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180
           TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHS 
Sbjct: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHS- 180

Query: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH 240
                                   NGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH
Sbjct: 181 ------------------------NGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH 240

Query: 241 DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSN 300
           DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSN
Sbjct: 241 DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSN 300

Query: 301 AVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV 360
           AVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV
Sbjct: 301 AVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV 360

Query: 361 QTRSS-VSLARANLRALAARVAINR 384
           QTRSS VSLARANLRALAARVAINR
Sbjct: 361 QTRSSSVSLARANLRALAARVAINR 360

[Close]

BLAST of Csor.00g263280 vs. NCBI nr
Match: XP_022934994.1 (E3 ubiquitin-protein ligase ORTHRUS 1-like [Cucurbita moschata] >XP_022934995.1 E3 ubiquitin-protein ligase ORTHRUS 1-like [Cucurbita moschata])

HSP 1 Score: 538 bits (1385), Expect = 6.94e-189
Identity = 297/386 (76.94%), Postives = 329/386 (85.23%), Query Frame = 0


Query: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60
           MVQEGS  SASEPER  + S+PLE GND   +FSPRFKSAAAMAGWDEEALLIASLVV+D
Sbjct: 1   MVQEGSRASASEPERRAIESRPLESGNDADSFFSPRFKSAAAMAGWDEEALLIASLVVDD 60

Query: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120
           TP+REF+QKKR VL CKSP SGSRRKRR S ++ISIP AVLDL+ EE TV+DDA KQD E
Sbjct: 61  TPEREFQQKKRSVLHCKSPTSGSRRKRRTSTSIISIPVAVLDLDAEEPTVRDDATKQDPE 120

Query: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180
           TAEA+PKKS+SL EQKAG SS S  CSTLPC+DKLREELSCAICLEICFEPSTTPCGHSF
Sbjct: 121 TAEAEPKKSNSLIEQKAGDSSLS--CSTLPCIDKLREELSCAICLEICFEPSTTPCGHSF 180

Query: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH 240
           CKKCLRSAAD+CGK+CPKCRQLISNGRSCTVNTVLWNTIQLLFP+EVEARK     CSSH
Sbjct: 181 CKKCLRSAADRCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPQEVEARKVVAKECSSH 240

Query: 241 DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRD-EDGESNGRMTQQAPFS 300
           +KK+QD E AFYSSL NHN +AT TSSR GS+S RR EI  RD EDGE + R+ QQA   
Sbjct: 241 EKKVQDPENAFYSSLQNHNTQATDTSSRRGSSSRRRGEITVRDDEDGERDNRVMQQAASL 300

Query: 301 NAVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQ 360
           NA  SRV SRMH +S+R +R TTRDADVS RRGTPDQDQ+AALALRL+REEFMEAFRD  
Sbjct: 301 NA-ESRVPSRMHRKSIRSMRMTTRDADVSSRRGTPDQDQDAALALRLQREEFMEAFRDTP 360

Query: 361 VQTR-SSVSLARANLRALAARVAINR 384
           VQTR SS+SLARANLRA+A+R A++R
Sbjct: 361 VQTRRSSLSLARANLRAMASRAAVSR 383

[Close]

BLAST of Csor.00g263280 vs. ExPASy TrEMBL
Match: A0A6J1ENN5 (LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111435179 PE=4 SV=1)

HSP 1 Score: 706 bits (1821), Expect = 1.44e-255
Identity = 374/378 (98.94%), Postives = 375/378 (99.21%), Query Frame = 0


Query: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60
           MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED
Sbjct: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60

Query: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120
           TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE
Sbjct: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120

Query: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180
           TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF
Sbjct: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180

Query: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH 240
           CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFP+EVEARKEAKGGCSSH
Sbjct: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPQEVEARKEAKGGCSSH 240

Query: 241 DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSN 300
           DKKIQDTEKAFYSS SNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRM QQAPFSN
Sbjct: 241 DKKIQDTEKAFYSSSSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMMQQAPFSN 300

Query: 301 AVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV 360
           AVSSRVQSRMHHRSVRPVR TTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV
Sbjct: 301 AVSSRVQSRMHHRSVRPVRTTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQV 360

Query: 361 QTRSSVSLARANLRALAA 378
           QTRSSVSLARANLRALAA
Sbjct: 361 QTRSSVSLARANLRALAA 378

[Close]

BLAST of Csor.00g263280 vs. ExPASy TrEMBL
Match: A0A6J1F9B4 (E3 ubiquitin-protein ligase ORTHRUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441989 PE=4 SV=1)

HSP 1 Score: 538 bits (1385), Expect = 3.36e-189
Identity = 297/386 (76.94%), Postives = 329/386 (85.23%), Query Frame = 0


Query: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60
           MVQEGS  SASEPER  + S+PLE GND   +FSPRFKSAAAMAGWDEEALLIASLVV+D
Sbjct: 1   MVQEGSRASASEPERRAIESRPLESGNDADSFFSPRFKSAAAMAGWDEEALLIASLVVDD 60

Query: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120
           TP+REF+QKKR VL CKSP SGSRRKRR S ++ISIP AVLDL+ EE TV+DDA KQD E
Sbjct: 61  TPEREFQQKKRSVLHCKSPTSGSRRKRRTSTSIISIPVAVLDLDAEEPTVRDDATKQDPE 120

Query: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180
           TAEA+PKKS+SL EQKAG SS S  CSTLPC+DKLREELSCAICLEICFEPSTTPCGHSF
Sbjct: 121 TAEAEPKKSNSLIEQKAGDSSLS--CSTLPCIDKLREELSCAICLEICFEPSTTPCGHSF 180

Query: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH 240
           CKKCLRSAAD+CGK+CPKCRQLISNGRSCTVNTVLWNTIQLLFP+EVEARK     CSSH
Sbjct: 181 CKKCLRSAADRCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPQEVEARKVVAKECSSH 240

Query: 241 DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRD-EDGESNGRMTQQAPFS 300
           +KK+QD E AFYSSL NHN +AT TSSR GS+S RR EI  RD EDGE + R+ QQA   
Sbjct: 241 EKKVQDPENAFYSSLQNHNTQATDTSSRRGSSSRRRGEITVRDDEDGERDNRVMQQAASL 300

Query: 301 NAVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQ 360
           NA  SRV SRMH +S+R +R TTRDADVS RRGTPDQDQ+AALALRL+REEFMEAFRD  
Sbjct: 301 NA-ESRVPSRMHRKSIRSMRMTTRDADVSSRRGTPDQDQDAALALRLQREEFMEAFRDTP 360

Query: 361 VQTR-SSVSLARANLRALAARVAINR 384
           VQTR SS+SLARANLRA+A+R A++R
Sbjct: 361 VQTRRSSLSLARANLRAMASRAAVSR 383

[Close]

BLAST of Csor.00g263280 vs. ExPASy TrEMBL
Match: A0A6J1J0X7 (E3 ubiquitin-protein ligase TRIM39-like OS=Cucurbita maxima OX=3661 GN=LOC111482456 PE=4 SV=1)

HSP 1 Score: 520 bits (1340), Expect = 2.61e-182
Identity = 297/389 (76.35%), Postives = 325/389 (83.55%), Query Frame = 0


Query: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60
           MVQEGST SASEPE+  + S+PLE GND   +FSPRFKSAAAMAGWDEEALLIASLVV+D
Sbjct: 1   MVQEGSTASASEPEQRVIESRPLECGNDADSFFSPRFKSAAAMAGWDEEALLIASLVVDD 60

Query: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120
           TP+REF+QKKR VL CKSP SGSRRKRR S + ISIP AVLDL+ EE TVKDDA KQD E
Sbjct: 61  TPEREFQQKKRSVLHCKSPTSGSRRKRRISTSKISIPVAVLDLDAEEPTVKDDATKQDPE 120

Query: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180
           TAEA+PKKSDSL EQKAGASS S  CSTLP +DKLREELSCAICLEICFEPSTTPCGHSF
Sbjct: 121 TAEAEPKKSDSLIEQKAGASSLS--CSTLPFIDKLREELSCAICLEICFEPSTTPCGHSF 180

Query: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGG-CSS 240
           CKKCLRSAAD+CGK+CPKCRQLISNGRSCTVNTVLWNTIQLLFP+EVEARK      CSS
Sbjct: 181 CKKCLRSAADRCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPQEVEARKVVVAKECSS 240

Query: 241 HDKKIQDTEKAFYSSLSNHNM--RATRTSSRHGSTSSRRREIMGRD-EDGESNGRMTQQA 300
           H+KK+QD EKAFYSSL NHN   +AT T SR GS+S RR EI  RD ED E + R+ QQA
Sbjct: 241 HEKKVQDPEKAFYSSLQNHNTNRQATDTLSRRGSSSRRRGEITVRDDEDDEWDNRVMQQA 300

Query: 301 PFSNAVSSRVQSRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFR 360
             SNA  SRV SRMH RS+R +R  TRDAD S RRGTPDQDQ+AALALRL+REEFMEA R
Sbjct: 301 ASSNA-ESRVPSRMHRRSIRSLRMATRDADESSRRGTPDQDQDAALALRLQREEFMEALR 360

Query: 361 DNQVQTR-SSVSLARANLRALAARVAINR 384
           D  VQTR SS+SLARANLRA+A+R A +R
Sbjct: 361 DTPVQTRRSSLSLARANLRAMASRAAASR 386

[Close]

BLAST of Csor.00g263280 vs. ExPASy TrEMBL
Match: A0A0A0LBY2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592120 PE=4 SV=1)

HSP 1 Score: 496 bits (1278), Expect = 5.22e-173
Identity = 286/385 (74.29%), Postives = 320/385 (83.12%), Query Frame = 0


Query: 1   MVQEGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVED 60
           MV EGST SASE       SKPL I ND   + SPRFKSAAAMAGWDEEALLIASLVV+D
Sbjct: 1   MVSEGSTASASE-------SKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDD 60

Query: 61  TPDREFRQKKRLVLQCKSPLSGSRRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQE 120
           TP+REF+QKKR VLQ KSP SGSRRKRR   ++ISIP AVLDL+E E TVKDD PKQ+ +
Sbjct: 61  TPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPK 120

Query: 121 TAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180
           +AEA+ KKSDS+ EQKA ASS +S  STLPCMDKLREELSCAICLEICFEPSTTPCGHSF
Sbjct: 121 SAEAEAKKSDSMVEQKADASSLTS--STLPCMDKLREELSCAICLEICFEPSTTPCGHSF 180

Query: 181 CKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSH 240
           CKKCLRSAADKCGK+CPKCRQLISNGRSCTVNTVLWNTIQLLFP+EVEARKEAK  C+S 
Sbjct: 181 CKKCLRSAADKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEAKE-CNSR 240

Query: 241 DKKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSN 300
           +KKIQD EKAFYSSL N++ R   TSSRH ST  RR EI  ++E+GE + R+TQ+A  SN
Sbjct: 241 EKKIQDPEKAFYSSLQNYDTRPIGTSSRHASTR-RRGEITVQEENGEWDSRVTQRAVSSN 300

Query: 301 AVSSRVQSRMHHRSVRPVRRTTRDADV-SRRRGTPDQDQEAALALRLRREEFMEAFRDN- 360
           A  SRVQSRMH RS+RP+R  TR  DV S RRGTPDQDQ+AALALRL+REEF+EAFRD  
Sbjct: 301 A-ESRVQSRMHRRSIRPMRMATRGVDVRSSRRGTPDQDQDAALALRLQREEFLEAFRDTT 360

Query: 361 QVQTRSSVSLARANLRALAARVAIN 383
           QV TRSS+SL RAN+RA+A+R AIN
Sbjct: 361 QVHTRSSLSLTRANIRAIASRAAIN 373

[Close]

BLAST of Csor.00g263280 vs. ExPASy TrEMBL
Match: A0A1S3BPD3 (LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103491762 PE=4 SV=1)

HSP 1 Score: 488 bits (1256), Expect = 1.42e-169
Identity = 286/386 (74.09%), Postives = 313/386 (81.09%), Query Frame = 0


Query: 4   EGSTTSASEPERETVGSKPLEIGNDGAGYFSPRFKSAAAMAGWDEEALLIASLVVEDTPD 63
           EGST   SE        KPL I ND   + SPRFKSAAAMAGWDEEALLIASLVV+DTP+
Sbjct: 6   EGSTAGTSE-------LKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPE 65

Query: 64  REFRQKKRLVLQCKSPLSGS--RRKRRASANLISIPAAVLDLEEEESTVKDDAPKQDQET 123
           REF+QKKR  LQ KSP S S  RRKRR   ++ISIP  VLDLEEEE  VKDD PKQ+ + 
Sbjct: 66  REFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDDGPKQEPKY 125

Query: 124 AEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFC 183
           AEA+ KK DS+ EQKA ASS SS  STLPCMDKLREELSCAICLEICFEPSTTPCGHSFC
Sbjct: 126 AEAEAKKCDSMVEQKADASSLSS--STLPCMDKLREELSCAICLEICFEPSTTPCGHSFC 185

Query: 184 KKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSHD 243
           KKCLRSAADKCGK+CPKCRQLISNGRSCTVNTVLWNTIQLLFP+EVEARKE K  C+SH+
Sbjct: 186 KKCLRSAADKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEVKE-CNSHE 245

Query: 244 KKIQDTEKAFYSSLSNHNMRATRTSSRHGSTSSRRR-EIMGRDEDGESNGRMTQQAPFSN 303
           KK QD EKAFYSSL N+N R T TSSRH S SSRRR EI   +EDGE + RMTQ+A  SN
Sbjct: 246 KKNQDPEKAFYSSLQNYNTRPTGTSSRHASNSSRRRAEITVGEEDGEWDSRMTQRAASSN 305

Query: 304 AVSSRVQSRMHHRSVRPVRRTTRDADV-SRRRGTPDQDQEAALALRLRREEFMEAFRDN- 363
           A  SRVQSRMH RS+RP+R  TR ADV S RRGTPDQDQ+AALALRL+REEF+EAFRD  
Sbjct: 306 A-ESRVQSRMHRRSIRPMRMATRGADVRSSRRGTPDQDQDAALALRLQREEFLEAFRDTT 365

Query: 364 QVQTRSSVSLARANLRALAARVAINR 384
           QV TRSS+SL RAN+RA+A+R AINR
Sbjct: 366 QVHTRSSLSLTRANIRAIASRAAINR 380

[Close]

BLAST of Csor.00g263280 vs. TAIR 10
Match: AT3G27330.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 244.2 bits (622), Expect = 1.7e-64
Identity = 169/376 (44.95%), Postives = 214/376 (56.91%), Query Frame = 0


Query: 19  GSKPLEIGNDGAG-----YFSPRFKSAAAMAGWDEEALLIASLVVEDTPDREFRQKKR-- 78
           GSK + I  +  G     + SPRFKSAAAMAGWDEE L+IAS VV+DTP+R   +++R  
Sbjct: 578 GSKEVSIAREKNGENAEIFISPRFKSAAAMAGWDEEDLIIASFVVDDTPERSSSKRRRRS 637

Query: 79  -LVLQCKSPLSGSRRKRRASANLISIPAAVLD---LEEEESTVKDDAPKQDQETAEADPK 138
            L+ +   P   SRR +R   +L+ +P   LD     EEE + +    K++ ET   + K
Sbjct: 638 NLLFKSTPPSGSSRRNQRVKQSLVPLPVIDLDKVIRHEEEKSAEKKKKKREMETETKEEK 697

Query: 139 KSDSLDEQKAGASSSSSTCSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRS 198
           K D  DE+      S S    LPC+DKLR+ELSCAICLEICFEPSTT CGHSFCKKCLRS
Sbjct: 698 KIDK-DEK------SLSDHVVLPCIDKLRDELSCAICLEICFEPSTTTCGHSFCKKCLRS 757

Query: 199 AADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPREVEARKEAKGGCSSHDKKIQDT 258
           AADKCG+KCPKCRQLI NGR CTVNTVLWNTIQLLFP+EVEA++ A              
Sbjct: 758 AADKCGRKCPKCRQLIGNGRYCTVNTVLWNTIQLLFPKEVEAQRAASA------------ 817

Query: 259 EKAFYSSLSNHNMRATRTSSRHGSTSSRRREIMGRDEDGESNGRMTQQAPFSNAVSSRVQ 318
                      N++   T S              R+ +     R  + A F   +     
Sbjct: 818 -----------NLKGKETPS-------------PRNPNQRLRSRNRETALFQERLQREDI 877

Query: 319 SRMHHRSVRPVRRTTRDADVSRRRGTPDQDQEAALALRLRREEFMEAFRDNQVQTRSS-- 378
           SR+     R  R   R    S R    DQ+++AALA+RL+R+EF  AF     +T SS  
Sbjct: 878 SRLLVSEERSERSERRRRSTSMRL---DQNRDAALAMRLQRQEFASAFGATTAETSSSSV 907

Query: 379 --VSLARANLRALAAR 380
             +S ARANL+A+A+R
Sbjct: 938 STLSRARANLQAMASR 907

[Close]

BLAST of Csor.00g263280 vs. TAIR 10
Match: AT1G18660.4 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-11
Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 0


Query: 98  AAVLDLEEEESTVKDDAPKQDQETAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLRE 157
           A  L L E     +D      Q    + P +S+  + +K   +S   T      M +  +
Sbjct: 137 ACALMLLERYEVARDTILSGLQIDPFSGPLRSNLQELEKVMPNSMRKTHG----MAERSD 196

Query: 158 ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLI-SNGRSCTVNTVLW 217
           +  C +CL++ +EP+TTPCGH+FC+ CL  + D+ G KCP CR +I    R+C V+  L 
Sbjct: 197 DFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDR-GNKCPLCRTVIFMTPRTCAVSVTLN 256

Query: 218 NTIQLLFPREVEARK 232
           N I+  FP E   RK
Sbjct: 257 NIIEKNFPEEYAERK 266

[Close]

BLAST of Csor.00g263280 vs. TAIR 10
Match: AT1G18660.2 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-11
Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 0


Query: 98  AAVLDLEEEESTVKDDAPKQDQETAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLRE 157
           A  L L E     +D      Q    + P +S+  + +K   +S   T      M +  +
Sbjct: 137 ACALMLLERYEVARDTILSGLQIDPFSGPLRSNLQELEKVMPNSMRKTHG----MAERSD 196

Query: 158 ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLI-SNGRSCTVNTVLW 217
           +  C +CL++ +EP+TTPCGH+FC+ CL  + D+ G KCP CR +I    R+C V+  L 
Sbjct: 197 DFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDR-GNKCPLCRTVIFMTPRTCAVSVTLN 256

Query: 218 NTIQLLFPREVEARK 232
           N I+  FP E   RK
Sbjct: 257 NIIEKNFPEEYAERK 266

[Close]

BLAST of Csor.00g263280 vs. TAIR 10
Match: AT1G18660.3 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-11
Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 0


Query: 98  AAVLDLEEEESTVKDDAPKQDQETAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLRE 157
           A  L L E     +D      Q    + P +S+  + +K   +S   T      M +  +
Sbjct: 137 ACALMLLERYEVARDTILSGLQIDPFSGPLRSNLQELEKVMPNSMRKTHG----MAERSD 196

Query: 158 ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLI-SNGRSCTVNTVLW 217
           +  C +CL++ +EP+TTPCGH+FC+ CL  + D+ G KCP CR +I    R+C V+  L 
Sbjct: 197 DFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDR-GNKCPLCRTVIFMTPRTCAVSVTLN 256

Query: 218 NTIQLLFPREVEARK 232
           N I+  FP E   RK
Sbjct: 257 NIIEKNFPEEYAERK 266

[Close]

BLAST of Csor.00g263280 vs. TAIR 10
Match: AT1G18660.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-11
Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 0


Query: 98  AAVLDLEEEESTVKDDAPKQDQETAEADPKKSDSLDEQKAGASSSSSTCSTLPCMDKLRE 157
           A  L L E     +D      Q    + P +S+  + +K   +S   T      M +  +
Sbjct: 137 ACALMLLERYEVARDTILSGLQIDPFSGPLRSNLQELEKVMPNSMRKTHG----MAERSD 196

Query: 158 ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLI-SNGRSCTVNTVLW 217
           +  C +CL++ +EP+TTPCGH+FC+ CL  + D+ G KCP CR +I    R+C V+  L 
Sbjct: 197 DFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDR-GNKCPLCRTVIFMTPRTCAVSVTLN 256

Query: 218 NTIQLLFPREVEARK 232
           N I+  FP E   RK
Sbjct: 257 NIIEKNFPEEYAERK 266

The following BLAST results are available for this feature:

BLAST of Csor.00g263280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PJ69	1.1e-10	42.65	Tripartite motif-containing protein 65 OS=Homo sapiens OX=9606 GN=TRIM65 PE=1 SV...	[more]
Q8IYW5	1.8e-10	41.77	E3 ubiquitin-protein ligase RNF168 OS=Homo sapiens OX=9606 GN=RNF168 PE=1 SV=1	[more]
Q7T308	2.4e-10	44.44	E3 ubiquitin-protein ligase rnf168 OS=Danio rerio OX=7955 GN=rnf168 PE=2 SV=1	[more]
Q0IIM1	5.3e-10	44.30	E3 ubiquitin-protein ligase RNF168 OS=Bos taurus OX=9913 GN=RNF168 PE=2 SV=2	[more]
Q80XJ2	3.4e-09	39.24	E3 ubiquitin-protein ligase RNF168 OS=Mus musculus OX=10090 GN=Rnf168 PE=1 SV=3	[more]

BLAST of Csor.00g263280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588921.1	1.76e-262	100.00	E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022928318.1	2.97e-255	98.94	LON peptidase N-terminal domain and RING finger protein 3-like [Cucurbita moscha...	[more]
XP_023531716.1	4.94e-243	94.62	E3 ubiquitin-protein ligase RNF168-like [Cucurbita pepo subsp. pepo]	[more]
KAG7022688.1	1.57e-234	93.25	hypothetical protein SDJN02_16422, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022934994.1	6.94e-189	76.94	E3 ubiquitin-protein ligase ORTHRUS 1-like [Cucurbita moschata] >XP_022934995.1 ...	[more]

BLAST of Csor.00g263280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENN5	1.44e-255	98.94	LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucurbita mosc...	[more]
A0A6J1F9B4	3.36e-189	76.94	E3 ubiquitin-protein ligase ORTHRUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1J0X7	2.61e-182	76.35	E3 ubiquitin-protein ligase TRIM39-like OS=Cucurbita maxima OX=3661 GN=LOC111482...	[more]
A0A0A0LBY2	5.22e-173	74.29	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592120 P...	[more]
A0A1S3BPD3	1.42e-169	74.09	LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo O...	[more]

BLAST of Csor.00g263280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27330.1	1.7e-64	44.95	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G18660.4	3.7e-11	34.07	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G18660.2	3.7e-11	34.07	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G18660.3	3.7e-11	34.07	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G18660.1	3.7e-11	34.07	zinc finger (C3HC4-type RING finger) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 161..199 e-value: 1.1E-6 score: 38.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 161..200 score: 12.474524
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 104..230 e-value: 4.0E-23 score: 83.3
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 161..199 e-value: 4.5E-7 score: 29.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..308
None	No IPR available	PANTHER	PTHR23328:SF6	SUBFAMILY NOT NAMED	coord: 26..241 coord: 303..382
None	No IPR available	PANTHER	PTHR23328	UNCHARACTERIZED	coord: 26..241 coord: 303..382
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 153..224
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 176..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g263280.m01	Csor.00g263280.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding