Csor.00g263020 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g263020
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 12308019 .. 12308330 (+)
RNA-Seq ExpressionCsor.00g263020
SyntenyCsor.00g263020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTTCTACAAGCAATACAAAGGGACCAAAACAAAGCCAACTGGTTTGGTTGGCTATGTCTTCCACCGGGACTATGCTATTTCTCCACACAACGTTGCTTTGTTGGTGCACGAGAACCCCGGCCCCGACACAGCGGTGACTCGGGACTCCTTGACTCAGTTCGATAACCTGTATGGAATTGTCGCTGATGAAGGTATCGATGTAAAGGCTGCAAACTATATTTCCTCCACTCTAGCACGGTTCAAAAGTTTGAACGAGTTAACTCCGATAGAAATACTGTCTCCTCCGTTGGCTCGTCGTGAGATTTAA

mRNA sequence

ATGCCTTTCTACAAGCAATACAAAGGGACCAAAACAAAGCCAACTGGTTTGGTTGGCTATGTCTTCCACCGGGACTATGCTATTTCTCCACACAACGTTGCTTTGTTGGTGCACGAGAACCCCGGCCCCGACACAGCGGTGACTCGGGACTCCTTGACTCAGTTCGATAACCTGTATGGAATTGTCGCTGATGAAGGTATCGATGTAAAGGCTGCAAACTATATTTCCTCCACTCTAGCACGGTTCAAAAGTTTGAACGAGTTAACTCCGATAGAAATACTGTCTCCTCCGTTGGCTCGTCGTGAGATTTAA

Coding sequence (CDS)

ATGCCTTTCTACAAGCAATACAAAGGGACCAAAACAAAGCCAACTGGTTTGGTTGGCTATGTCTTCCACCGGGACTATGCTATTTCTCCACACAACGTTGCTTTGTTGGTGCACGAGAACCCCGGCCCCGACACAGCGGTGACTCGGGACTCCTTGACTCAGTTCGATAACCTGTATGGAATTGTCGCTGATGAAGGTATCGATGTAAAGGCTGCAAACTATATTTCCTCCACTCTAGCACGGTTCAAAAGTTTGAACGAGTTAACTCCGATAGAAATACTGTCTCCTCCGTTGGCTCGTCGTGAGATTTAA

Protein sequence

MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDNLYGIVADEGIDVKAANYISSTLARFKSLNELTPIEILSPPLARREI
Homology
BLAST of Csor.00g263020 vs. NCBI nr
Match: KAG6588895.1 (hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210 bits (534), Expect = 1.93e-68
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDNLYG 60
           MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDNLYG
Sbjct: 1   MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDNLYG 60

Query: 61  IVADEGIDVKAANYISSTLARFKSLNELTPIEILSPPLARREI 103
           IVADEGIDVKAANYISSTLARFKSLNELTPIEILSPPLARREI
Sbjct: 61  IVADEGIDVKAANYISSTLARFKSLNELTPIEILSPPLARREI 103

BLAST of Csor.00g263020 vs. NCBI nr
Match: KAG7022660.1 (hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143 bits (361), Expect = 5.97e-42
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDNLYG 60
          MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFD+LYG
Sbjct: 1  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYG 60

Query: 61 IVADEGID 68
          IVADEGID
Sbjct: 61 IVADEGID 68

BLAST of Csor.00g263020 vs. NCBI nr
Match: KAA0042928.1 (hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK05327.1 hypothetical protein E5676_scaffold108G001540 [Cucumis melo var. makuwa])

HSP 1 Score: 140 bits (352), Expect = 2.02e-40
Identity = 74/107 (69.16%), Postives = 84/107 (78.50%), Query Frame = 0

Query: 1   MPFYKQYKGTKTKPTGLVGYVFHRDY---AISPHNVALLVHENPGPDTAVTRDSLTQFDN 60
           MPFYKQY G+KTK TGLVGYVFHR+      S HN+ALLV +NP  DT  TR SL+Q D+
Sbjct: 17  MPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNPSRDTTATRGSLSQSDH 76

Query: 61  LYGIVADEGIDVKAANYISSTLARFKSLNELT-PIEILSPPLARREI 103
            YGIVADEG+DVKAANYISSTLARFKSLNEL  PIE+ S PL  ++I
Sbjct: 77  SYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPHQQI 123

BLAST of Csor.00g263020 vs. NCBI nr
Match: KAE8650773.1 (hypothetical protein Csa_017653 [Cucumis sativus])

HSP 1 Score: 108 bits (270), Expect = 2.82e-28
Identity = 60/99 (60.61%), Postives = 67/99 (67.68%), Query Frame = 0

Query: 1  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDNLYG 60
          MPFYKQY G+KTK TGL                     ++PG DT  TRDSL+QFD  YG
Sbjct: 17 MPFYKQYNGSKTKQTGL---------------------DDPGRDTTATRDSLSQFDRSYG 76

Query: 61 IVADEGIDVKAANYISSTLARFKSLNELT-PIEILSPPL 98
          I+ADEG+DVKAANYISSTLARFKSLNEL  PIE+ S PL
Sbjct: 77 IIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPL 94

BLAST of Csor.00g263020 vs. NCBI nr
Match: XP_021648774.1 (uncharacterized protein LOC110641383 [Hevea brasiliensis])

HSP 1 Score: 67.0 bits (162), Expect = 1.45e-11
Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 0

Query: 1   MPFYK---------QYKGTKT-KP------TGLVGYVFHRDYAISP---HNVALLVHENP 60
           MPFY+         QY  +K  KP      T  VG+  H+DY I+P   + V+ ++   P
Sbjct: 16  MPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYIIAPPKQNKVSFIIP--P 75

Query: 61  GPDTAVTRDSLTQFDNLYGIVADEGIDVKAANYISSTLARFK 83
            PD+   RD LTQFD +YG+  DE +D+KAA+YISS   RFK
Sbjct: 76  APDS--NRDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 113

BLAST of Csor.00g263020 vs. ExPASy TrEMBL
Match: A0A0A0LVE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 1.33e-42
Identity = 73/101 (72.28%), Postives = 84/101 (83.17%), Query Frame = 0

Query: 1   MPFYKQYKGTKTKPTGLVGYVFHRDY--AISPHNVALLVHENPGPDTAVTRDSLTQFDNL 60
           MPFYKQY G+KTK TGLVGYVFHR+   ++S HN+ LLV ++PG DT  TRDSL+QFD  
Sbjct: 17  MPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPGRDTTATRDSLSQFDRS 76

Query: 61  YGIVADEGIDVKAANYISSTLARFKSLNELT-PIEILSPPL 98
           YGI+ADEG+DVKAANYISSTLARFKSLNEL  PIE+ S PL
Sbjct: 77  YGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPL 117

BLAST of Csor.00g263020 vs. ExPASy TrEMBL
Match: A0A5D3C0J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001540 PE=4 SV=1)

HSP 1 Score: 140 bits (352), Expect = 9.79e-41
Identity = 74/107 (69.16%), Postives = 84/107 (78.50%), Query Frame = 0

Query: 1   MPFYKQYKGTKTKPTGLVGYVFHRDY---AISPHNVALLVHENPGPDTAVTRDSLTQFDN 60
           MPFYKQY G+KTK TGLVGYVFHR+      S HN+ALLV +NP  DT  TR SL+Q D+
Sbjct: 17  MPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNPSRDTTATRGSLSQSDH 76

Query: 61  LYGIVADEGIDVKAANYISSTLARFKSLNELT-PIEILSPPLARREI 103
            YGIVADEG+DVKAANYISSTLARFKSLNEL  PIE+ S PL  ++I
Sbjct: 77  SYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPHQQI 123

BLAST of Csor.00g263020 vs. ExPASy TrEMBL
Match: A0A6A6LUB7 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.45e-11
Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 0

Query: 1   MPFYK---------QYKGTKT-KP------TGLVGYVFHRDYAISP---HNVALLVHENP 60
           MPFY+         QY  +K  KP      T  VG+  H+DY I+P   + V+ ++   P
Sbjct: 50  MPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYIIAPPKQNKVSFIIP--P 109

Query: 61  GPDTAVTRDSLTQFDNLYGIVADEGIDVKAANYISSTLARFK 83
            PD+   RD LTQFD +YG+  DE +D+KAA+YISS   RFK
Sbjct: 110 APDS--NRDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 147

BLAST of Csor.00g263020 vs. ExPASy TrEMBL
Match: A0A067LN74 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.80e-11
Identity = 42/99 (42.42%), Postives = 54/99 (54.55%), Query Frame = 0

Query: 1   MPFYKQYKGTKT-------KPT------GLVGYVFHRDYAISP--HNVALLVHENPGPDT 60
           +PFY+  K T T       KP+        VG+V H+DY I+P    V+ +V     P  
Sbjct: 16  IPFYRSSKATSTVQYSSKVKPSQSSPSAASVGFVVHQDYIITPPKQKVSFIV-----PTA 75

Query: 61  AVTRDS-LTQFDNLYGIVADEGIDVKAANYISSTLARFK 83
              RD  L+QFD LYG+  DEG+D+KAA YISS   RFK
Sbjct: 76  DSNRDKYLSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

BLAST of Csor.00g263020 vs. ExPASy TrEMBL
Match: A0A2I4E7Q1 (uncharacterized protein LOC108987043 OS=Juglans regia OX=51240 GN=LOC108987043 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.37e-09
Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 0

Query: 1   MPFYK---------QYKGTKTKP------TGLVGYVFHRDYAISPHNVALLVHENPGPDT 60
           MPF++         QY  +K KP      T  +G+V H+DYA++      +    P    
Sbjct: 16  MPFHRSATKPSSTVQYISSKIKPNQSSPSTAPLGFVVHQDYAVAQPKQKAVSFIVPPDHN 75

Query: 61  AVTRDS--LTQFDNLYGIVADEGIDVKAANYISSTLARFK 83
            + RD   L++++NLYG+ ADE +D+KAA YISS   RFK
Sbjct: 76  MINRDLVVLSKYENLYGLAADESVDMKAATYISSVQERFK 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6588895.11.93e-68100.00hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7022660.15.97e-4298.53hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAA0042928.12.02e-4069.16hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK0532... [more]
KAE8650773.12.82e-2860.61hypothetical protein Csa_017653 [Cucumis sativus][more]
XP_021648774.11.45e-1142.16uncharacterized protein LOC110641383 [Hevea brasiliensis][more]
Match NameE-valueIdentityDescription
A0A0A0LVE71.33e-4272.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1[more]
A0A5D3C0J69.79e-4169.16Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6A6LUB71.45e-1142.16Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1[more]
A0A067LN741.80e-1142.42Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1[more]
A0A2I4E7Q11.37e-0937.00uncharacterized protein LOC108987043 OS=Juglans regia OX=51240 GN=LOC108987043 P... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g263020.m01Csor.00g263020.m01mRNA