Csor.00g262860 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGGTTCATCCGCCAGGAAGCTGAGGAAAAGGCCAACGAGATCTCTGTCTCTGCTGAAGAAGTATATTTGGCGCTTTATTTTCACCATTTTCTTTGATTCTGTTCGTTTCCGATTCTGGATGGCCGGATTTACTAAAGAATTTCTAGGTTTCGTATGTGCTATGTATGTGTTTGTCTGTCTACATTGACTATTGAACAGAATGGATGGATTTTTGTTTTTTTTTCCTCTTGTAGGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAAATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATGTAATTACTTCGACTTTTTCCTCATAATCTGCTTATTACAGTTTCATTATTCATGTTCCTCAGTGGCTTGGTTTGTTATGGTGCACAATTTTCAATTGCTGGAAAGATCTTTTTCCTTAATCTTCCTTTGTTATAATTTAAAAGGATGTAGTTGCCGAATTACATCTTCGTGTAATTGATGCTTTGTTTCAGCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTTCTGCAAGCACAGGATGATGTAGTGAACTCCATGAAAGAGGCAGCGTCAAAAGAACTTCTTAATGTCAGCGGAAATGAACATGTCTACAAAAATCTGTTGAAGGAACTCATTGTTCAGGTTAGTAAATTCAAAACCTCGTCCACATTAAAGAATTACTAAATTATAATTCATAAAGTTTGCTGCGTGTGTGATTATTTGCTGGTTATTGTTCTTTAGAGTTCAATGTGAGAGCTACTCAATGTTGTTTATTTACGAGATTATAAGTTCACCTAAGAGAATTCCACACAAAAGATTTGTGCTTGATAATAAGGAACTTTAAATATCCAGAATAAATCTCTGGTTTGCATTACTCTGGCTGGTAAAATTCTCTATTTGTAAGGCATCGAATTGAATTACAAATCACCCTGATAGACGATGATTGAGTTTTCTTTTCTCAATCTTTTTGTTGATGGCTGCTGCTTAGAATGCATTGTGGAGGTTGATCTTCCTGTTAAGATTTTGGGTTTGTATGGTTGCTATGGGATAAATATGCTTACAGATATACTAGTTGTGTTATCCACTGCCTCAAGTCTGTTTTTTATATAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTGTTGCGATGCCGCAAAAGTGACCTCCATTTGGTGGAGTCTGTGCTGAGTTCAGCAGCATATGAATATGCAAATAAAGCGGAAGTTCATGAGCCAGAGATCATCGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCATGGCCCCTTTTGGTAATCCTTCCTTTTCATTTTTGTAGGATTTAATTTGTTACAACGTTCCTGCTTCTGAAAACTTTGTCAGTCGTTGGTGTCTTTCTCTGTAAACGGTTATAATTTATTCTAGCATTGGAAAAATTGTGTGTTAGAGATTGCAAATTAACTTTTGCATACTTTGCCTGCCAGGCAGCGTATTTTTCAAGGGTGGTAGCTAGTTACTCCTGCCCTGGGGGAGGGTACATACTTTTTTTAGAAGAAAGATAACTAATTACTCCTGCATTTTGTTACAATATGCACAGATTGTACCCTTCTATGTAGACAATAGTTTTAAACAGCCCATGTTTTTATTTCCAAGCCTGTGAATTAAACGATTCTAATGAAGTTTACCGTTACTTTGATAGAGATTGCTGTTTCCTATCGAAAAAAAAAAAAAAGCTTTGATAGAGATGGTATGCATGACCTATTCTACTTAAGCCCATGTTTAATGATTCTATTAAAAACTAGCTGTCTTAATTTATAGAAAGATTCAGGTTGTACATTTTGCAAACTACGGGAGTGCTTAATTTAACTCAAAATACAAGAATGCAATGTAGGAAATTCAACAGGAATATAATCGACAATGTTCCCTTTGAAATTGTTTGAAGCCTTGTATTGTAAGATTTTTGCCTTTTGGTTCTGTACTCACCAATTTTCTTAGAAAAGTCAAGAAAATATCTGTAAACACTTCTAATATCAAGTTTTGATCGTTCAGTTCTGGAGGTGTAGTAATGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCTAGGTTGGATGTCGTGTTCCGTAAAAAGCTTCCTGAGGTAGTTTCTCTTCTCAACTATACCCTACTATCTATTATTGGATGCTAATTACATTGCCAAATGCTTGTGGGTATCTGAAAAACTCAAGGCCATGTATCATTTTTAGAGAGGAAAAAAGATTTACATTTATAATATATAAATATATCTATATCTATATCTATCTATCTATCTATCTATCTATATGTATGTATGTATGTATGTATGTATGTATGTATATATTTATTTTGCTTGATGACAAGGAGTAAACCCAATGTTAACAGGTCATGCACTGTTTATGATTCTTTACTGACTACTCAAATTTTGCCCTGGATGCATAATACACTTGTGATTAAGCCTAGCTTGACAATAAAGAGTTCGCACTATAACCTTTTACTAACCTAATATTATCTACGACACGATTCCTTTACTTTATATTAGCTTTCAAAGGCAAATTCTTTATTCGGGGACGTTAATATTAATCTTTTTAATAAAATTGTACAAATACCGTGTTTTGGGCTGTTTGCATTCTATCTTTCTTTTATCACCAGTTTGCCAAGTGTAAGTTCCTATATCAGGCCAACAATTCTTGTCGATGATTATTTCTTTTCTCCATTTTGTCACAACGTTCACGTTTAAGAGTACTTACAGCTGCATTTCTTATTGGCAGATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGA ATGGTGAGGTTCATCCGCCAGGAAGCTGAGGAAAAGGCCAACGAGATCTCTGTCTCTGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAAATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTTCTGCAAGCACAGGATGATGTAGTGAACTCCATGAAAGAGGCAGCGTCAAAAGAACTTCTTAATGTCAGCGGAAATGAACATGTCTACAAAAATCTGTTGAAGGAACTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTGTTGCGATGCCGCAAAAGTGACCTCCATTTGGTGGAGTCTGTGCTGAGTTCAGCAGCATATGAATATGCAAATAAAGCGGAAGTTCATGAGCCAGAGATCATCGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCATGGCCCCTTTTGTTCTGGAGGTGTAGTAATGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCTAGGTTGGATGTCGTGTTCCGTAAAAAGCTTCCTGAGATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGA ATGGTGAGGTTCATCCGCCAGGAAGCTGAGGAAAAGGCCAACGAGATCTCTGTCTCTGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAAATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTTCTGCAAGCACAGGATGATGTAGTGAACTCCATGAAAGAGGCAGCGTCAAAAGAACTTCTTAATGTCAGCGGAAATGAACATGTCTACAAAAATCTGTTGAAGGAACTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTGTTGCGATGCCGCAAAAGTGACCTCCATTTGGTGGAGTCTGTGCTGAGTTCAGCAGCATATGAATATGCAAATAAAGCGGAAGTTCATGAGCCAGAGATCATCGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCATGGCCCCTTTTGTTCTGGAGGTGTAGTAATGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCTAGGTTGGATGTCGTGTTCCGTAAAAAGCTTCCTGAGATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGA MVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLNVSGNEHVYKNLLKELIVQSLLRLKEPAVLLRCRKSDLHLVESVLSSAAYEYANKAEVHEPEIIVDHVHLPPGPSHHHHHGPFCSGGVVMASRDGKIVCENTLDARLDVVFRKKLPEIRKSLFSQVAA Homology
BLAST of Csor.00g262860 vs. ExPASy Swiss-Prot
Match: O23948 (V-type proton ATPase subunit E OS=Gossypium hirsutum OX=3635 GN=VATE PE=2 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 4.8e-93 Identity = 190/225 (84.44%), Postives = 198/225 (88.00%), Query Frame = 0
BLAST of Csor.00g262860 vs. ExPASy Swiss-Prot
Match: Q9SWE7 (V-type proton ATPase subunit E OS=Citrus limon OX=2708 GN=VATE PE=2 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 1.5e-91 Identity = 186/218 (85.32%), Postives = 199/218 (91.28%), Query Frame = 0
BLAST of Csor.00g262860 vs. ExPASy Swiss-Prot
Match: Q9MB46 (V-type proton ATPase subunit E OS=Citrus unshiu OX=55188 GN=VATE PE=2 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 4.5e-91 Identity = 186/218 (85.32%), Postives = 198/218 (90.83%), Query Frame = 0
BLAST of Csor.00g262860 vs. ExPASy Swiss-Prot
Match: Q41396 (V-type proton ATPase subunit E OS=Spinacia oleracea OX=3562 GN=VATE PE=2 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 7.9e-88 Identity = 175/217 (80.65%), Postives = 193/217 (88.94%), Query Frame = 0
BLAST of Csor.00g262860 vs. ExPASy Swiss-Prot
Match: Q39258 (V-type proton ATPase subunit E1 OS=Arabidopsis thaliana OX=3702 GN=VHA-E1 PE=1 SV=2) HSP 1 Score: 304.3 bits (778), Expect = 1.1e-81 Identity = 168/218 (77.06%), Postives = 188/218 (86.24%), Query Frame = 0
BLAST of Csor.00g262860 vs. NCBI nr
Match: KAG6588879.1 (V-type proton ATPase subunit E, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 405 bits (1042), Expect = 3.48e-142 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Csor.00g262860 vs. NCBI nr
Match: XP_022928571.1 (V-type proton ATPase subunit E-like [Cucurbita moschata] >XP_022928572.1 V-type proton ATPase subunit E-like [Cucurbita moschata] >XP_023529268.1 V-type proton ATPase subunit E-like [Cucurbita pepo subsp. pepo] >XP_023529269.1 V-type proton ATPase subunit E-like [Cucurbita pepo subsp. pepo] >KAG7022638.1 V-type proton ATPase subunit E [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 405 bits (1042), Expect = 5.36e-142 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Csor.00g262860 vs. NCBI nr
Match: XP_022989719.1 (V-type proton ATPase subunit E-like [Cucurbita maxima] >XP_022989720.1 V-type proton ATPase subunit E-like [Cucurbita maxima]) HSP 1 Score: 402 bits (1032), Expect = 1.79e-140 Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0
BLAST of Csor.00g262860 vs. NCBI nr
Match: XP_038877402.1 (V-type proton ATPase subunit E-like [Benincasa hispida] >XP_038877403.1 V-type proton ATPase subunit E-like [Benincasa hispida]) HSP 1 Score: 386 bits (991), Expect = 3.17e-134 Identity = 207/217 (95.39%), Postives = 210/217 (96.77%), Query Frame = 0
BLAST of Csor.00g262860 vs. NCBI nr
Match: XP_008450144.1 (PREDICTED: V-type proton ATPase subunit E [Cucumis melo]) HSP 1 Score: 384 bits (987), Expect = 1.29e-133 Identity = 206/217 (94.93%), Postives = 212/217 (97.70%), Query Frame = 0
BLAST of Csor.00g262860 vs. ExPASy TrEMBL
Match: A0A6J1EKB7 (V-type proton ATPase subunit E-like OS=Cucurbita moschata OX=3662 GN=LOC111435337 PE=3 SV=1) HSP 1 Score: 405 bits (1042), Expect = 2.59e-142 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Csor.00g262860 vs. ExPASy TrEMBL
Match: A0A6J1JN60 (V-type proton ATPase subunit E-like OS=Cucurbita maxima OX=3661 GN=LOC111486719 PE=3 SV=1) HSP 1 Score: 402 bits (1032), Expect = 8.67e-141 Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0
BLAST of Csor.00g262860 vs. ExPASy TrEMBL
Match: A0A1S3BNM0 (V-type proton ATPase subunit E OS=Cucumis melo OX=3656 GN=LOC103491820 PE=3 SV=1) HSP 1 Score: 384 bits (987), Expect = 6.25e-134 Identity = 206/217 (94.93%), Postives = 212/217 (97.70%), Query Frame = 0
BLAST of Csor.00g262860 vs. ExPASy TrEMBL
Match: A0A6J1J2K4 (V-type proton ATPase subunit E-like OS=Cucurbita maxima OX=3661 GN=LOC111482103 PE=3 SV=1) HSP 1 Score: 378 bits (971), Expect = 1.71e-131 Identity = 203/217 (93.55%), Postives = 209/217 (96.31%), Query Frame = 0
BLAST of Csor.00g262860 vs. ExPASy TrEMBL
Match: A0A6J1F4V1 (V-type proton ATPase subunit E-like OS=Cucurbita moschata OX=3662 GN=LOC111442179 PE=3 SV=1) HSP 1 Score: 377 bits (968), Expect = 4.91e-131 Identity = 203/217 (93.55%), Postives = 209/217 (96.31%), Query Frame = 0
BLAST of Csor.00g262860 vs. TAIR 10
Match: AT4G11150.1 (vacuolar ATP synthase subunit E1 ) HSP 1 Score: 304.3 bits (778), Expect = 7.9e-83 Identity = 168/218 (77.06%), Postives = 188/218 (86.24%), Query Frame = 0
BLAST of Csor.00g262860 vs. TAIR 10
Match: AT1G64200.1 (vacuolar H+-ATPase subunit E isoform 3 ) HSP 1 Score: 297.7 bits (761), Expect = 7.4e-81 Identity = 167/224 (74.55%), Postives = 189/224 (84.38%), Query Frame = 0
BLAST of Csor.00g262860 vs. TAIR 10
Match: AT3G08560.1 (vacuolar H+-ATPase subunit E isoform 2 ) HSP 1 Score: 257.3 bits (656), Expect = 1.1e-68 Identity = 143/214 (66.82%), Postives = 178/214 (83.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|