Csor.00g262590 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g262590
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 12011128 .. 12011991 (-)
RNA-Seq ExpressionCsor.00g262590
SyntenyCsor.00g262590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAGGCGACAGTTAAGTAAACGACGCCGGCCGTGCCTTTCTTTTCAAGCGTTCCTTTTTCATTTTCTTCATCAAAGCCTTCTTCCTCTCGCCGCCCACGACGGACTCCGGCGGTTTCCGAATTTCCCTTTGCCTTTGGTGGGAAGCAGCTCCGCTCAACCCCAATTCCTCCCTCCTTCTCAATGCCGGACTTCCTCTCTTCTGCGCTCCATCTCTACTGACGGATCTTCCCACAGGTAATCCTTCATCCACATCTCTTCATTCTTGCCTCAATCGGCTTTACTTACTTTTTCTTCTACCTTTCCAATTTTCTTTCCGTCTATTTTACTCTTTACATTTAGATCCATGGTTTCGCCTTCAGATCTTGATCAGGAATTACCCTGTTCATCCCTCGTTACCATGTCTCTGTCATCTTTACTTCTGTGTTGCCTGTTTCTTTTTTCTATATGTTCTTGAATTTCTCTCTCTGGGTCCGTTTTTTTTGTCTCTGAATTTGTTACGACTGTAAGCTGTAACAGTTGTTTGCCCTATGCGTTCATATTAAAACACCTCCTACCCGGGTTGCAGGGAGTGTTATGTTCCGAATCTATGTTCCGTTCCGTTTCGGAATCGATATTCTGCTTTTTGTTGTAACGATTACGAGCTGATGTTTTCTTCCGAGCTTGGCTCAAAATTCAGATAATGCTCAAAATTTTAGGATCTTCCAGCCGTTGACACTTACTCGAGATTCACCTTTTGAGCTCGTTTTTTATTGCTTTGGAATTTAAAACTTCTCGTGCTTATCCTCATGGGCAATTGACACTGTCTTACCTTTTGGCATTTACTTCTTTGCTGCTTTTCAACCACAGGCTGGGATATTAA

mRNA sequence

ATGGTCAGGCGACAGTTAAGTAAACGACGCCGGCCGTGCCTTTCTTTTCAAGCGTTCCTTTTTCATTTTCTTCATCAAAGCCTTCTTCCTCTCGCCGCCCACGACGGACTCCGGCGGTTTCCGAATTTCCCTTTGCCTTTGGTGGGAAGCAGCTCCGCTCAACCCCAATTCCTCCCTCCTTCTCAATGCCGGACTTCCTCTCTTCTGCGCTCCATCTCTACTGACGGATCTTCCCACAGGCTGGGATATTAA

Coding sequence (CDS)

ATGGTCAGGCGACAGTTAAGTAAACGACGCCGGCCGTGCCTTTCTTTTCAAGCGTTCCTTTTTCATTTTCTTCATCAAAGCCTTCTTCCTCTCGCCGCCCACGACGGACTCCGGCGGTTTCCGAATTTCCCTTTGCCTTTGGTGGGAAGCAGCTCCGCTCAACCCCAATTCCTCCCTCCTTCTCAATGCCGGACTTCCTCTCTTCTGCGCTCCATCTCTACTGACGGATCTTCCCACAGGCTGGGATATTAA

Protein sequence

MVRRQLSKRRRPCLSFQAFLFHFLHQSLLPLAAHDGLRRFPNFPLPLVGSSSAQPQFLPPSQCRTSSLLRSISTDGSSHRLGY
Homology
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BLAST of Csor.00g262590 vs. NCBI nr
Match: KAG6588853.1 (hypothetical protein SDJN03_17418, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022609.1 hypothetical protein SDJN02_16343, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167 bits (422), Expect = 5.57e-52
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MVRRQLSKRRRPCLSFQAFLFHFLHQSLLPLAAHDGLRRFPNFPLPLVGSSSAQPQFLPP 60
          MVRRQLSKRRRPCLSFQAFLFHFLHQSLLPLAAHDGLRRFPNFPLPLVGSSSAQPQFLPP
Sbjct: 1  MVRRQLSKRRRPCLSFQAFLFHFLHQSLLPLAAHDGLRRFPNFPLPLVGSSSAQPQFLPP 60

Query: 61 SQCRTSSLLRSISTDGSSHRLGY 83
          SQCRTSSLLRSISTDGSSHRLGY
Sbjct: 61 SQCRTSSLLRSISTDGSSHRLGY 83

The following BLAST results are available for this feature:
BLAST of Csor.00g262590 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g262590 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588853.15.57e-52100.00hypothetical protein SDJN03_17418, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g262590 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g262590 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g262590.m01Csor.00g262590.m01mRNA