Csor.00g262490 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g262490
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	Csor_Chr11: 11947494 .. 11948959 (+)
RNA-Seq Expression	Csor.00g262490
Synteny	Csor.00g262490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTTGATCAGAGTTCAAGACGCTAATCCCATCACGGATGCAAACTTCCTATTCGCGGAGTTCATCAGCCATGAAGCCGACTTAGAGTTCAAACCAAATAGCTTAACCATAATTGCCAAAAACCCTACCCTTCGCTTCATAGCAACGCTTTACATTTCCAAAACCTTCTGCCAAGACTTCACCATCAATCAAACTCACATTGCTAGAGTTTCCCTAATATCCTTCATTGATGCCATCATGACTGCCGCTGCTACTCGCTTTGATACATTGGCTATCACTCTTCCAAGCGCTTATATCATGATCCTTACATTCGAGACATCAAGTGAGTATCTATTGATACCCCACAACAACATTGCCAAGAACTATGATTCTTGCTTTCTTTACCTTTCAAGAACTCACTTTCTTTTTATAGCTCCTTCAGGGCGTGTGCTTCAGTCACATCCACGTGCACTTCCAATGTCACCTTCGCTAATGATGGATTTTCCTAAGCCTATACTCGCAAAACATTTCACCATTAAAGCCGAATGTTTTAGACGCATTCTTGAAGAACTACCTCTCTTGCAGGATTTAGGTAATATAATCCGTGTTCTCAATCGAATTTTAGGTCAAACTCAATTGTTAAGATTGTAAATTTTGTATCTAAACCGTAAAATATTTAGGTCGAGTGGATTCAGGTAGTGAAGAACAACTTAATTAACTCATCTTTCTCTATCATAGTTAGTGTTACTCCCACGGGATCAGAAGTCAAATTCTCAAATGAATTCAAAGAGATTATTCTTTCTCAAGAGGTATTATTTTCGTTCTTGAGACTTGATTTTTTTTTTTTTTTTTTTCTATTTAGTTCTTGGGGTTTCAAAAATTATATATCCAGTCTCTAAAGTTTGAATTTGATTTCTAATGAATTCCTAAAGCGGTTTTAAATCGTCTCGTAAAAGTTGATAATTGTGATATCCCACATACACCCTTCAAAGGGTGTGGAAACCTTCCTCTTGCAAACACGTTTTAAAGTCTGGAGGGGAAGTCCGAGAGGGAAAGCCTAAAAAGGATCATTTCTGTTAGCGGATGGATCTGGGCCATTGCAATAATTAATCTAATAGAATGATATGTATTTTTTTAGAGTTAAACCAAATAGAAACCAATTTTGAGTTTCAAGAACTAAGAAATCTTCAAGAACGAAATGAATCGAATCTTGTTTGATTTTAAAATTTGATAGAACATTTGATTAATGTATAAAGGTGTTGGATGATGTTACGCAGGCTGGAGAATGTACAATCATGGGTTATGAAGGATGTGTTGATACTCGGTTCAAAGTTGTTCTTAATCCGAGGATGTTTTTCCTTGATTTGTCATCTAAAACAAGCACAAGTATATGGTTTTATAGGACAATGAGTGCTGGTAGCATAATGGCTGTCCCAACTTGTAGATCGTATGCTATGTATTACATCCATTTTCCTCCGATATGA

mRNA sequence

ATGTTGTTGATCAGAGTTCAAGACGCTAATCCCATCACGGATGCAAACTTCCTATTCGCGGAGTTCATCAGCCATGAAGCCGACTTAGAGTTCAAACCAAATAGCTTAACCATAATTGCCAAAAACCCTACCCTTCGCTTCATAGCAACGCTTTACATTTCCAAAACCTTCTGCCAAGACTTCACCATCAATCAAACTCACATTGCTAGAGTTTCCCTAATATCCTTCATTGATGCCATCATGACTGCCGCTGCTACTCGCTTTGATACATTGGCTATCACTCTTCCAAGCGCTTATATCATGATCCTTACATTCGAGACATCAAGTGAGTATCTATTGATACCCCACAACAACATTGCCAAGAACTATGATTCTTGCTTTCTTTACCTTTCAAGAACTCACTTTCTTTTTATAGCTCCTTCAGGGCGTGTGCTTCAGTCACATCCACGTGCACTTCCAATGTCACCTTCGCTAATGATGGATTTTCCTAAGCCTATACTCGCAAAACATTTCACCATTAAAGCCGAATGTTTTAGACGCATTCTTGAAGAACTACCTCTCTTGCAGGATTTAGTTAGTGTTACTCCCACGGGATCAGAAGTCAAATTCTCAAATGAATTCAAAGAGATTATTCTTTCTCAAGAGGCTGGAGAATGTACAATCATGGGTTATGAAGGATGTGTTGATACTCGGTTCAAAGTTGTTCTTAATCCGAGGATGTTTTTCCTTGATTTGTCATCTAAAACAAGCACAAGTATATGGTTTTATAGGACAATGAGTGCTGGTAGCATAATGGCTGTCCCAACTTGTAGATCGTATGCTATGTATTACATCCATTTTCCTCCGATATGA

Coding sequence (CDS)

ATGTTGTTGATCAGAGTTCAAGACGCTAATCCCATCACGGATGCAAACTTCCTATTCGCGGAGTTCATCAGCCATGAAGCCGACTTAGAGTTCAAACCAAATAGCTTAACCATAATTGCCAAAAACCCTACCCTTCGCTTCATAGCAACGCTTTACATTTCCAAAACCTTCTGCCAAGACTTCACCATCAATCAAACTCACATTGCTAGAGTTTCCCTAATATCCTTCATTGATGCCATCATGACTGCCGCTGCTACTCGCTTTGATACATTGGCTATCACTCTTCCAAGCGCTTATATCATGATCCTTACATTCGAGACATCAAGTGAGTATCTATTGATACCCCACAACAACATTGCCAAGAACTATGATTCTTGCTTTCTTTACCTTTCAAGAACTCACTTTCTTTTTATAGCTCCTTCAGGGCGTGTGCTTCAGTCACATCCACGTGCACTTCCAATGTCACCTTCGCTAATGATGGATTTTCCTAAGCCTATACTCGCAAAACATTTCACCATTAAAGCCGAATGTTTTAGACGCATTCTTGAAGAACTACCTCTCTTGCAGGATTTAGTTAGTGTTACTCCCACGGGATCAGAAGTCAAATTCTCAAATGAATTCAAAGAGATTATTCTTTCTCAAGAGGCTGGAGAATGTACAATCATGGGTTATGAAGGATGTGTTGATACTCGGTTCAAAGTTGTTCTTAATCCGAGGATGTTTTTCCTTGATTTGTCATCTAAAACAAGCACAAGTATATGGTTTTATAGGACAATGAGTGCTGGTAGCATAATGGCTGTCCCAACTTGTAGATCGTATGCTATGTATTACATCCATTTTCCTCCGATATGA

Protein sequence

MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQDFTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIAKNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRRILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRMFFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI

Homology

[Close]

BLAST of Csor.00g262490 vs. NCBI nr
Match: KAG6588843.1 (hypothetical protein SDJN03_17408, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 561 bits (1447), Expect = 1.02e-201
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQD 60
           MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQD
Sbjct: 1   MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQD 60

Query: 61  FTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIA 120
           FTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIA
Sbjct: 61  FTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIA 120

Query: 121 KNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180
           KNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR
Sbjct: 121 KNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180

Query: 181 ILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240
           ILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM
Sbjct: 181 ILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240

Query: 241 FFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI 283
           FFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI
Sbjct: 241 FFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI 283

[Close]

BLAST of Csor.00g262490 vs. NCBI nr
Match: XP_022928485.1 (uncharacterized protein LOC111435280 isoform X1 [Cucurbita moschata])

HSP 1 Score: 467 bits (1202), Expect = 7.43e-165
Identity = 245/283 (86.57%), Postives = 247/283 (87.28%), Query Frame = 0


Query: 1   MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQD 60
           MLLIRVQDANPITDANFLFAEFI+HEADLEFKPNSLTIIA NPTLRFIATLYISKTFCQD
Sbjct: 1   MLLIRVQDANPITDANFLFAEFINHEADLEFKPNSLTIIATNPTLRFIATLYISKTFCQD 60

Query: 61  FTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIA 120
           FTINQTHIARVSL SFIDAIMTAAAT FDTLAITLPSAYIMILTFETS+           
Sbjct: 61  FTINQTHIARVSLTSFIDAIMTAAATSFDTLAITLPSAYIMILTFETST----------- 120

Query: 121 KNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180
                              PSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR
Sbjct: 121 -------------------PSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180

Query: 181 ILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240
           ILEELPL QDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM
Sbjct: 181 ILEELPLWQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240

Query: 241 FFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI 283
           FFLDLSSKTSTSIWFYRT SAGSIMAVPTCRSYAMYYIHFP I
Sbjct: 241 FFLDLSSKTSTSIWFYRTTSAGSIMAVPTCRSYAMYYIHFPQI 253

[Close]

BLAST of Csor.00g262490 vs. NCBI nr
Match: XP_022989711.1 (uncharacterized protein LOC111486711 [Cucurbita maxima])

HSP 1 Score: 464 bits (1195), Expect = 8.67e-164
Identity = 242/283 (85.51%), Postives = 248/283 (87.63%), Query Frame = 0


Query: 1   MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQD 60
           MLLIRVQDANPITDANFLFAEFI+HEADLEFKPNSLTIIA NPTLRFIATLYISK+FCQD
Sbjct: 1   MLLIRVQDANPITDANFLFAEFINHEADLEFKPNSLTIIATNPTLRFIATLYISKSFCQD 60

Query: 61  FTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIA 120
           FTINQTHIARVSL SFIDAIMTAAATRFDTLAITLPSAYIMILTFETS+           
Sbjct: 61  FTINQTHIARVSLTSFIDAIMTAAATRFDTLAITLPSAYIMILTFETST----------- 120

Query: 121 KNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180
                              PSGRV QSHPRALPMSPSLM+DFPKPILAKHFTIKAECFRR
Sbjct: 121 -------------------PSGRVPQSHPRALPMSPSLMVDFPKPILAKHFTIKAECFRR 180

Query: 181 ILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240
           +L ELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDT+FKVVLNPRM
Sbjct: 181 VLAELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTQFKVVLNPRM 240

Query: 241 FFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI 283
           FFL LSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI
Sbjct: 241 FFLGLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI 253

[Close]

BLAST of Csor.00g262490 vs. NCBI nr
Match: XP_022928486.1 (uncharacterized protein LOC111435280 isoform X2 [Cucurbita moschata])

HSP 1 Score: 458 bits (1179), Expect = 2.13e-161
Identity = 242/283 (85.51%), Postives = 243/283 (85.87%), Query Frame = 0


Query: 1   MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQD 60
           MLLIRVQDANPITDANFLFAEFI+HEADLEFKPNSLTIIA NPTLRFIATLYISKTFCQD
Sbjct: 1   MLLIRVQDANPITDANFLFAEFINHEADLEFKPNSLTIIATNPTLRFIATLYISKTFCQD 60

Query: 61  FTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIA 120
           FTINQTHIARVSL SFIDAIMTAAAT FDTLAITLPSAYIMILTFETS            
Sbjct: 61  FTINQTHIARVSLTSFIDAIMTAAATSFDTLAITLPSAYIMILTFETSR----------- 120

Query: 121 KNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180
                                 RVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR
Sbjct: 121 ----------------------RVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180

Query: 181 ILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240
           ILEELPL QDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM
Sbjct: 181 ILEELPLWQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240

Query: 241 FFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI 283
           FFLDLSSKTSTSIWFYRT SAGSIMAVPTCRSYAMYYIHFP I
Sbjct: 241 FFLDLSSKTSTSIWFYRTTSAGSIMAVPTCRSYAMYYIHFPQI 250

[Close]

BLAST of Csor.00g262490 vs. NCBI nr
Match: KAG6588842.1 (hypothetical protein SDJN03_17407, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 333 bits (854), Expect = 6.94e-112
Identity = 174/282 (61.70%), Postives = 206/282 (73.05%), Query Frame = 0


Query: 1   MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQD 60
           M LIRVQD  PITDA FLF +FI+ +ADL F  NS +IIA NP+LRFIA  YISK +CQD
Sbjct: 1   MFLIRVQDTKPITDATFLFKQFINEKADLGFNRNSFSIIASNPSLRFIARFYISKKYCQD 60

Query: 61  FTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIA 120
           F INQTHIA++SL SF DAIMTAAATRFDT++ITLPS Y M LTFE S+           
Sbjct: 61  FFINQTHIAKISLPSFSDAIMTAAATRFDTMSITLPSPYKMTLTFEIST----------- 120

Query: 121 KNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180
                              P GRV +S+ RALP+SP+  MDF +P+L+KHFTIK ECFR 
Sbjct: 121 -------------------PPGRVPRSNSRALPLSPTQAMDFGRPLLSKHFTIKPECFRH 180

Query: 181 ILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240
           IL ELP  QDLV VTPT SEVKFS+E KE+IL+ EAG+CT +GYEGCVDT+FK+VL+PR 
Sbjct: 181 ILTELPNSQDLVCVTPTTSEVKFSHESKEVILTPEAGQCTTVGYEGCVDTQFKIVLHPRT 240

Query: 241 FFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPP 282
           FF DLS KT TSIWF RT ++GS+MAV + R +A+YYIHFPP
Sbjct: 241 FFFDLSFKTCTSIWFCRTSNSGSVMAVQSSRFHAIYYIHFPP 252

[Close]

BLAST of Csor.00g262490 vs. ExPASy TrEMBL
Match: A0A6J1ERT1 (uncharacterized protein LOC111435280 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435280 PE=4 SV=1)

HSP 1 Score: 467 bits (1202), Expect = 3.60e-165
Identity = 245/283 (86.57%), Postives = 247/283 (87.28%), Query Frame = 0


Query: 1   MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQD 60
           MLLIRVQDANPITDANFLFAEFI+HEADLEFKPNSLTIIA NPTLRFIATLYISKTFCQD
Sbjct: 1   MLLIRVQDANPITDANFLFAEFINHEADLEFKPNSLTIIATNPTLRFIATLYISKTFCQD 60

Query: 61  FTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIA 120
           FTINQTHIARVSL SFIDAIMTAAAT FDTLAITLPSAYIMILTFETS+           
Sbjct: 61  FTINQTHIARVSLTSFIDAIMTAAATSFDTLAITLPSAYIMILTFETST----------- 120

Query: 121 KNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180
                              PSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR
Sbjct: 121 -------------------PSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180

Query: 181 ILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240
           ILEELPL QDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM
Sbjct: 181 ILEELPLWQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240

Query: 241 FFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI 283
           FFLDLSSKTSTSIWFYRT SAGSIMAVPTCRSYAMYYIHFP I
Sbjct: 241 FFLDLSSKTSTSIWFYRTTSAGSIMAVPTCRSYAMYYIHFPQI 253

[Close]

BLAST of Csor.00g262490 vs. ExPASy TrEMBL
Match: A0A6J1JKX5 (uncharacterized protein LOC111486711 OS=Cucurbita maxima OX=3661 GN=LOC111486711 PE=4 SV=1)

HSP 1 Score: 464 bits (1195), Expect = 4.20e-164
Identity = 242/283 (85.51%), Postives = 248/283 (87.63%), Query Frame = 0


Query: 1   MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQD 60
           MLLIRVQDANPITDANFLFAEFI+HEADLEFKPNSLTIIA NPTLRFIATLYISK+FCQD
Sbjct: 1   MLLIRVQDANPITDANFLFAEFINHEADLEFKPNSLTIIATNPTLRFIATLYISKSFCQD 60

Query: 61  FTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIA 120
           FTINQTHIARVSL SFIDAIMTAAATRFDTLAITLPSAYIMILTFETS+           
Sbjct: 61  FTINQTHIARVSLTSFIDAIMTAAATRFDTLAITLPSAYIMILTFETST----------- 120

Query: 121 KNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180
                              PSGRV QSHPRALPMSPSLM+DFPKPILAKHFTIKAECFRR
Sbjct: 121 -------------------PSGRVPQSHPRALPMSPSLMVDFPKPILAKHFTIKAECFRR 180

Query: 181 ILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240
           +L ELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDT+FKVVLNPRM
Sbjct: 181 VLAELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTQFKVVLNPRM 240

Query: 241 FFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI 283
           FFL LSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI
Sbjct: 241 FFLGLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI 253

[Close]

BLAST of Csor.00g262490 vs. ExPASy TrEMBL
Match: A0A6J1EKE7 (uncharacterized protein LOC111435280 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435280 PE=4 SV=1)

HSP 1 Score: 458 bits (1179), Expect = 1.03e-161
Identity = 242/283 (85.51%), Postives = 243/283 (85.87%), Query Frame = 0


Query: 1   MLLIRVQDANPITDANFLFAEFISHEADLEFKPNSLTIIAKNPTLRFIATLYISKTFCQD 60
           MLLIRVQDANPITDANFLFAEFI+HEADLEFKPNSLTIIA NPTLRFIATLYISKTFCQD
Sbjct: 1   MLLIRVQDANPITDANFLFAEFINHEADLEFKPNSLTIIATNPTLRFIATLYISKTFCQD 60

Query: 61  FTINQTHIARVSLISFIDAIMTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIA 120
           FTINQTHIARVSL SFIDAIMTAAAT FDTLAITLPSAYIMILTFETS            
Sbjct: 61  FTINQTHIARVSLTSFIDAIMTAAATSFDTLAITLPSAYIMILTFETSR----------- 120

Query: 121 KNYDSCFLYLSRTHFLFIAPSGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180
                                 RVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR
Sbjct: 121 ----------------------RVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRR 180

Query: 181 ILEELPLLQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240
           ILEELPL QDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM
Sbjct: 181 ILEELPLWQDLVSVTPTGSEVKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRM 240

Query: 241 FFLDLSSKTSTSIWFYRTMSAGSIMAVPTCRSYAMYYIHFPPI 283
           FFLDLSSKTSTSIWFYRT SAGSIMAVPTCRSYAMYYIHFP I
Sbjct: 241 FFLDLSSKTSTSIWFYRTTSAGSIMAVPTCRSYAMYYIHFPQI 250

[Close]

BLAST of Csor.00g262490 vs. ExPASy TrEMBL
Match: A0A6J1EK29 (uncharacterized protein LOC111435280 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435280 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 1.18e-86
Identity = 140/203 (68.97%), Postives = 153/203 (75.37%), Query Frame = 0


Query: 81  MTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIAKNYDSCFLYLSRTHFLFIAP 140
           MTAAATRFDT++ITLPS Y M LTFETS+                              P
Sbjct: 1   MTAAATRFDTMSITLPSPYKMTLTFETST------------------------------P 60

Query: 141 SGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRRILEELPLLQDLVSVTPTGSE 200
            GRV +S+ RALP+SP+  MDF +P+L+KHFTIK ECFR IL ELP  QDLV VTPT SE
Sbjct: 61  PGRVPRSNSRALPLSPTQAMDFGRPLLSKHFTIKPECFRHILTELPNSQDLVCVTPTTSE 120

Query: 201 VKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRMFFLDLSSKTSTSIWFYRTMS 260
           VKFS+E KE+IL+ EAGECTIMGYEGCVDTRFKVVLNPRMFFLDLSSKTSTSIWFYRT S
Sbjct: 121 VKFSHESKEVILTPEAGECTIMGYEGCVDTRFKVVLNPRMFFLDLSSKTSTSIWFYRTTS 173

Query: 261 AGSIMAVPTCRSYAMYYIHFPPI 283
           AGSIMAVPTCRSYAMYYIHFP I
Sbjct: 181 AGSIMAVPTCRSYAMYYIHFPQI 173

[Close]

BLAST of Csor.00g262490 vs. ExPASy TrEMBL
Match: A0A6J1JKZ5 (uncharacterized protein LOC111486730 OS=Cucurbita maxima OX=3661 GN=LOC111486730 PE=4 SV=1)

HSP 1 Score: 231 bits (589), Expect = 3.75e-73
Identity = 121/202 (59.90%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 81  MTAAATRFDTLAITLPSAYIMILTFETSSEYLLIPHNNIAKNYDSCFLYLSRTHFLFIAP 140
           MTAAATRFDT++ITLPS Y + LTFETS+                              P
Sbjct: 1   MTAAATRFDTMSITLPSPYKITLTFETST------------------------------P 60

Query: 141 SGRVLQSHPRALPMSPSLMMDFPKPILAKHFTIKAECFRRILEELPLLQDLVSVTPTGSE 200
            GRV +S+ RALP+SP+L MDF KP+LAKHFTIK E FR IL ELP  QD+V VTPT SE
Sbjct: 61  PGRVPRSNSRALPLSPTLAMDFGKPLLAKHFTIKPEFFRHILTELPNSQDIVCVTPTTSE 120

Query: 201 VKFSNEFKEIILSQEAGECTIMGYEGCVDTRFKVVLNPRMFFLDLSSKTSTSIWFYRTMS 260
           VKFS+E  E+IL+ EAG+CT +GYEGCVDT+FK+VL+PR FF DLSSKT TSIWF RT +
Sbjct: 121 VKFSHESNEVILTPEAGQCTTVGYEGCVDTQFKIVLHPRTFFFDLSSKTCTSIWFCRTSN 172

Query: 261 AGSIMAVPTCRSYAMYYIHFPP 282
           +GS+MAV + RS+A+YYIHFPP
Sbjct: 181 SGSVMAVQSSRSHAIYYIHFPP 172

The following BLAST results are available for this feature:

BLAST of Csor.00g262490 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g262490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588843.1	1.02e-201	100.00	hypothetical protein SDJN03_17408, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022928485.1	7.43e-165	86.57	uncharacterized protein LOC111435280 isoform X1 [Cucurbita moschata]	[more]
XP_022989711.1	8.67e-164	85.51	uncharacterized protein LOC111486711 [Cucurbita maxima]	[more]
XP_022928486.1	2.13e-161	85.51	uncharacterized protein LOC111435280 isoform X2 [Cucurbita moschata]	[more]
KAG6588842.1	6.94e-112	61.70	hypothetical protein SDJN03_17407, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Csor.00g262490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERT1	3.60e-165	86.57	uncharacterized protein LOC111435280 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JKX5	4.20e-164	85.51	uncharacterized protein LOC111486711 OS=Cucurbita maxima OX=3661 GN=LOC111486711...	[more]
A0A6J1EKE7	1.03e-161	85.51	uncharacterized protein LOC111435280 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EK29	1.18e-86	68.97	uncharacterized protein LOC111435280 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JKZ5	3.75e-73	59.90	uncharacterized protein LOC111486730 OS=Cucurbita maxima OX=3661 GN=LOC111486730...	[more]

BLAST of Csor.00g262490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.70.10.10		coord: 1..234 e-value: 2.2E-11 score: 45.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g262490.m01	Csor.00g262490.m01	mRNA